Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 2.4e-73 278.9 151 100.0
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.2e-61 240.0 137 96.4
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 2.7e-61 238.8 137 96.4
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 2.2e-55 219.2 137 87.6
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.6e-45 186.4 137 75.2
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 6.0e-45 184.5 137 73.7
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 6.7e-44 181.0 138 74.6
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 8.7e-44 180.6 137 73.7
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 8.7e-44 180.6 137 72.3
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.5e-43 179.1 137 71.5
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.5e-43 179.1 137 71.5
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 7.4e-43 177.6 137 72.3
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 9.6e-43 177.2 137 73.0
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 2.8e-42 175.6 138 71.7
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 3.7e-42 175.3 137 69.3
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 6.3e-42 174.5 137 69.3
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 1.4e-41 173.3 137 70.8
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 1.4e-41 173.3 137 67.2
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.4e-41 173.3 137 70.8
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.8e-41 172.9 137 71.5
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 1.8e-41 172.9 136 71.3
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 3.1e-41 172.2 137 67.2
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 4.1e-41 171.8 137 70.8
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 4.1e-41 171.8 137 70.1
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 5.3e-41 171.4 136 71.3
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 5.3e-41 171.4 137 71.5
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 6.9e-41 171.0 137 66.4
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 6.9e-41 171.0 137 69.3
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 6.9e-41 171.0 137 70.8
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 9.0e-41 170.6 136 69.1
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 9.0e-41 170.6 137 67.9
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.2e-40 170.2 136 71.3
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.5e-40 169.9 137 68.6
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.5e-40 169.9 137 69.3
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.5e-40 169.9 137 68.6
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 2.0e-40 169.5 137 67.2
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 2.0e-40 169.5 137 70.1
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 2.0e-40 169.5 137 70.1
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 4.5e-40 168.3 139 64.7
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 4.5e-40 168.3 136 69.1
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 4.5e-40 168.3 136 68.4
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.5e-40 168.3 138 71.0
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 5.9e-40 167.9 138 69.6
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 7.6e-40 167.5 137 67.2
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.0e-39 167.2 136 69.1
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 1.0e-39 167.2 136 69.1
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 1.3e-39 166.8 137 68.6
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.7e-39 166.4 138 68.1
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.9e-39 165.6 139 64.0
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 2.9e-39 165.6 135 65.9
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 2.9e-39 165.6 138 65.9
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 3.8e-39 165.2 137 65.0
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 5.0e-39 164.9 137 70.1
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 5.0e-39 164.9 138 67.4
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 6.5e-39 164.5 136 68.4
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 8.5e-39 164.1 137 67.2
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 2.5e-38 162.5 138 69.6
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 7.2e-38 161.0 138 68.8
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 9.3e-38 160.6 137 67.2
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 2.1e-37 159.5 137 66.4
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 3.6e-37 158.7 137 66.4
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.6e-37 158.7 139 66.9
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 6.1e-37 157.9 136 63.2
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 6.1e-37 157.9 136 62.5
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 7.9e-37 157.5 141 62.4
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 1.0e-36 157.1 163 59.5
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 5.1e-36 154.8 137 62.8
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 6.7e-36 154.5 140 65.0
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 6.7e-36 154.5 140 65.0
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 6.7e-36 154.5 140 65.0
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 1.1e-35 153.7 140 62.9
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 2.5e-35 152.5 137 63.5
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-35 152.1 141 63.1
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 3.3e-35 152.1 141 63.1
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 3.3e-35 152.1 141 63.1
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 4.3e-35 151.8 141 63.1
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 4.3e-35 151.8 179 54.2
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 1.6e-34 149.8 122 68.0
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 1.6e-34 149.8 122 68.0
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 1.6e-34 149.8 131 63.4
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 3.7e-34 148.7 136 62.5
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 4.8e-34 148.3 137 64.2
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.4e-33 146.7 138 61.6
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 4.1e-33 145.2 137 56.9
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 3.4e-32 142.1 114 68.4
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 1.0e-31 140.6 140 55.7
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.7e-31 139.8 128 59.4
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.7e-31 139.8 128 59.4
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 2.2e-31 139.4 139 58.3
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 8.5e-31 137.5 138 57.2
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.5e-30 136.0 141 60.3
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 4.2e-30 135.2 124 62.9
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.6e-29 132.1 140 57.9
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 4.6e-29 131.7 137 57.7
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 3.0e-28 129.0 140 54.3
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 3.9e-28 128.6 138 54.3
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 5.1e-28 128.3 93 71.0
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 5.1e-28 128.3 137 56.9
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 8.8e-28 127.5 149 54.4
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.1e-27 127.1 117 57.3
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 3.3e-27 125.6 104 61.5
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 9.7e-27 124.0 94 64.9
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 9.7e-27 124.0 94 71.3
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.8e-26 122.5 139 51.8
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.8e-25 119.8 100 66.0
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 5.3e-25 118.2 125 50.4
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 2.6e-24 115.9 148 50.7
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 3.4e-24 115.5 123 52.0
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.0e-23 114.0 98 64.3
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.7e-23 113.2 95 66.3
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 1.6e-21 106.7 81 65.4
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 2.7e-21 105.9 188 41.5
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 1.0e-20 104.0 141 46.8
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 8.8e-20 100.9 66 75.8
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 1.5e-19 100.1 110 50.0
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 3.3e-19 99.0 78 65.4
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 5.7e-19 98.2 65 76.9
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 5.7e-19 98.2 65 76.9
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 2.2e-18 96.3 110 42.7
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 2.8e-18 95.9 153 44.4
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 4.8e-18 95.1 65 72.3
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 8.2e-18 94.4 64 68.8
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 2.0e-16 89.7 66 66.7
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.3e-15 87.0 66 57.6
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.9e-14 83.2 140 35.7
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 4.2e-14 82.0 141 36.2
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 4.0e-12 75.5 142 36.6
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.9e-07 59.3 54 53.7
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 6.5e-07 58.2 42 73.8
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 4.2e-06 55.5 37 78.4
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 5.5e-06 55.1 58 43.1


User provided reference genes

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