Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.2e-272 943.0 614 100.0
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 7.8e-192 674.5 614 80.1
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 2.5e-190 669.5 536 89.4
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 7.8e-184 647.9 578 82.0
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.4e-116 424.5 600 57.8
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 6.8e-111 405.6 604 53.1
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.3e-109 401.4 603 44.3
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 2.8e-109 400.2 601 54.9
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.9e-109 399.4 608 39.8
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 7.8e-107 392.1 625 40.0
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 2.9e-106 390.2 617 49.4
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.1e-105 388.3 620 49.8
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-105 388.3 609 44.5
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.5e-105 387.1 601 49.6
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 2.5e-105 387.1 603 46.1
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 3.3e-105 386.7 605 50.9
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 2.0e-102 377.5 602 42.4
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 5.8e-102 375.9 602 52.8
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.9e-101 372.9 600 54.3
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.1e-100 371.7 608 53.3
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 4.1e-100 369.8 608 43.1
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 4.1e-100 369.8 603 46.9
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 7.0e-100 369.0 604 54.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 4.6e-99 366.3 599 52.9
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 7.8e-99 365.5 603 48.6
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 3.9e-98 363.2 613 51.9
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 4.3e-97 359.8 598 46.8
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 5.6e-97 359.4 605 48.8
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 9.5e-97 358.6 609 45.0
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 9.5e-97 358.6 603 47.9
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 2.8e-96 357.1 608 51.8
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.1e-95 355.1 631 40.7
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 2.2e-93 347.4 623 38.5
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 3.7e-93 346.7 608 51.6
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 6.0e-91 339.3 599 47.4
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 6.0e-91 339.3 598 47.0
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 1.3e-90 338.2 597 46.6
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.3e-90 337.4 600 48.7
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.5e-89 334.0 604 55.0
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 4.0e-87 326.6 604 54.8
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.6e-86 323.9 601 55.2
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 2.6e-86 323.9 602 43.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 5.8e-86 322.8 614 52.0
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 7.6e-86 322.4 629 39.7
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 8.3e-85 318.9 608 50.5
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.4e-84 318.2 608 41.6
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 1.9e-84 317.8 602 51.0
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 1.6e-83 314.7 606 47.4
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 7.8e-83 312.4 638 45.6
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 3.9e-82 310.1 611 47.0
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 3.3e-81 307.0 639 42.6
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 5.6e-81 306.2 613 44.7
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 9.6e-81 305.4 602 43.4
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 1.8e-79 301.2 604 52.0
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.1e-79 300.4 611 46.6
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 7.6e-78 295.8 642 42.4
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 9.9e-78 295.4 605 47.4
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 2.9e-77 293.9 570 42.5
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 8.4e-77 292.4 627 39.1
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 1.4e-76 291.6 605 46.4
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 5.4e-76 289.7 612 52.6
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 2.1e-75 287.7 615 40.0
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.7e-75 287.3 598 46.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 3.5e-75 287.0 602 40.4
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.6e-75 286.6 603 41.1
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.6e-75 286.6 603 41.1
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.7e-74 284.6 641 41.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.3e-74 284.3 607 44.2
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 6.6e-74 282.7 574 42.9
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.1e-73 282.0 539 50.5
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.5e-73 281.6 626 45.8
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 3.3e-73 280.4 624 44.6
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 4.3e-73 280.0 613 42.7
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 5.6e-73 279.6 606 45.7
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.6e-73 279.6 603 40.8
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 2.8e-72 277.3 542 44.6
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 6.2e-72 276.2 609 44.3
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 1.2e-70 271.9 603 38.3
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 1.2e-70 271.9 603 38.3
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 3.4e-70 270.4 603 45.8
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 4.2e-68 263.5 369 70.5
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.7e-67 260.8 325 55.4
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 4.6e-67 260.0 605 47.8
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 7.9e-67 259.2 604 47.7
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 1.7e-66 258.1 521 46.4
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.9e-66 256.9 385 57.9
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 2.1e-64 251.1 599 49.6
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.2e-62 245.4 604 46.0
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 9.9e-62 242.3 392 40.3
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 2.9e-61 240.7 632 45.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.1e-60 238.8 608 41.1
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.4e-60 238.4 548 35.2
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 3.2e-60 237.3 615 44.2
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 5.3e-55 219.9 528 38.8
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.0e-54 218.0 614 46.9
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.6e-54 217.6 600 47.2
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.8e-48 197.6 574 42.7
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.5e-46 191.8 622 27.5
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.5e-46 191.8 622 27.5
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.5e-46 191.8 311 48.9
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.3e-42 178.7 636 25.5
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.9e-41 174.9 538 33.8
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 7.7e-38 162.9 553 35.8
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.6e-35 155.2 385 30.9
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 7.4e-25 119.8 236 36.0
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 2.2e-21 108.2 157 38.9
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 3.2e-20 104.4 239 48.1
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 5.2e-18 97.1 115 48.7
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.6e-09 68.2 193 30.1
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 3.4e-09 67.8 48 70.8
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 9.8e-09 66.2 48 68.8
Actinidia27580 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.7e-08 65.5 96 42.7
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 8.3e-08 63.2 89 38.2


User provided reference genes

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