Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 1.0e-260 902.9 461 100.0
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 1.6e-245 852.4 461 94.8
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 9.6e-243 843.2 461 94.1
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 4.6e-221 771.2 462 85.7
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 1.2e-200 703.4 463 78.8
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 1.3e-199 699.9 460 79.1
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 6.5e-199 697.6 449 79.3
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 6.5e-199 697.6 468 76.5
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 4.2e-198 694.9 460 77.0
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 9.4e-198 693.7 453 78.6
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 3.6e-197 691.8 463 78.2
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 5.1e-196 688.0 460 75.9
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 6.7e-196 687.6 460 75.9
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 8.8e-196 687.2 463 77.1
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 2.0e-195 686.0 455 77.6
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 3.3e-195 685.3 394 85.8
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 3.7e-194 681.8 459 76.5
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 4.8e-194 681.4 453 77.7
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 8.2e-194 680.6 464 76.1
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 1.1e-193 680.2 435 80.2
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 1.8e-193 679.5 475 74.1
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 3.1e-193 678.7 464 75.2
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 6.9e-193 677.6 405 83.7
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 2.6e-192 675.6 456 77.0
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 1.7e-191 672.9 476 74.4
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 8.5e-191 670.6 468 74.6
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 1.1e-190 670.2 467 74.7
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 1.9e-190 669.5 458 75.1
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 2.5e-190 669.1 441 77.8
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 4.2e-190 668.3 400 83.5
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 5.5e-190 667.9 457 75.5
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 5.5e-190 667.9 441 78.0
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 5.5e-190 667.9 454 74.7
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 7.2e-190 667.5 403 80.9
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 3.6e-189 665.2 464 74.4
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 3.6e-189 665.2 443 77.4
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 7.9e-189 664.1 398 83.2
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.4e-188 663.3 476 70.8
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 1.4e-188 663.3 456 74.6
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.8e-188 662.9 444 77.7
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.9e-188 661.8 458 74.0
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 3.9e-188 661.8 464 73.3
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 5.1e-188 661.4 397 82.9
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 6.7e-188 661.0 476 71.6
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 6.7e-188 661.0 465 73.3
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 1.1e-187 660.2 456 73.9
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.0e-187 659.4 458 74.0
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 2.0e-187 659.4 397 82.4
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 2.0e-187 659.4 406 81.3
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 2.6e-187 659.1 443 76.1
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 2.6e-187 659.1 396 81.3
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 3.3e-187 658.7 457 74.4
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 4.4e-187 658.3 396 82.3
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 5.7e-187 657.9 466 73.2
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 5.7e-187 657.9 402 82.1
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 5.7e-187 657.9 441 76.2
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 5.7e-187 657.9 462 73.6
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 5.7e-187 657.9 397 82.6
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 7.4e-187 657.5 429 77.9
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 7.4e-187 657.5 400 80.5
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 9.7e-187 657.1 443 76.1
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 1.3e-186 656.8 470 71.9
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 1.7e-186 656.4 429 77.6
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 1.7e-186 656.4 462 73.6
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 2.2e-186 656.0 429 77.6
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 2.2e-186 656.0 443 75.8
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 2.2e-186 656.0 463 72.8
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 2.8e-186 655.6 406 81.8
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.7e-186 655.2 458 73.6
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 3.7e-186 655.2 462 74.0
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 4.8e-186 654.8 402 81.6
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 6.3e-186 654.4 462 74.0
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 6.3e-186 654.4 402 82.1
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 6.3e-186 654.4 458 73.1
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 8.2e-186 654.1 464 74.8
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 2.4e-185 652.5 460 73.0
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 4.1e-185 651.7 457 74.4
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 4.1e-185 651.7 460 73.3
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 7.0e-185 651.0 456 73.5
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 7.0e-185 651.0 447 76.1
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 9.1e-185 650.6 446 76.0
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 4.5e-184 648.3 400 81.0
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 5.9e-184 647.9 464 72.8
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 1.0e-183 647.1 424 76.4
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 1.0e-183 647.1 394 80.7
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 1.7e-183 646.4 471 69.9
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 2.2e-183 646.0 435 74.5
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 3.8e-183 645.2 462 69.7
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 3.8e-183 645.2 392 81.6
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 1.5e-182 643.3 397 79.8
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 1.5e-182 643.3 469 71.4
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 1.9e-182 642.9 442 74.0
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 2.5e-182 642.5 396 80.8
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 2.5e-182 642.5 458 71.8
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 3.2e-182 642.1 399 81.5
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 3.2e-182 642.1 398 81.9
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 2.1e-181 639.4 469 70.6
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 2.0e-179 632.9 437 72.3
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 9.7e-179 630.6 536 64.2
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 2.8e-178 629.0 449 72.8
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 2.7e-176 622.5 476 68.3
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 6.5e-175 617.8 396 76.8
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 7.2e-174 614.4 399 78.2
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 1.6e-168 596.7 437 69.6
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 6.1e-165 584.7 424 67.0
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 8.3e-162 574.3 478 64.9
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 7.5e-155 551.2 368 72.6
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 3.6e-149 532.3 431 63.8
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.2e-147 527.3 477 60.0
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 1.3e-146 523.9 391 67.0
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 3.2e-145 519.2 457 63.2
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 9.2e-145 517.7 458 63.3
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 7.8e-144 514.6 447 61.7
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.5e-142 510.4 348 74.4
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 3.7e-138 495.7 355 73.0
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 3.5e-136 489.2 386 62.2
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 2.1e-133 479.9 361 65.4
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 1.4e-129 467.2 375 61.6
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.4e-129 466.5 329 72.6
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 2.7e-128 463.0 384 61.5
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 6.0e-128 461.8 287 79.4
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 8.4e-122 441.4 272 82.0
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 6.0e-120 435.3 300 70.7
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 3.4e-115 419.5 406 58.6
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 4.9e-114 415.6 343 65.6
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 2.4e-113 413.3 300 71.7
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 1.1e-110 404.4 263 76.4
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 9.3e-105 384.8 325 66.2
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 1.0e-103 381.3 329 65.0
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 4.9e-98 362.5 211 84.4
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 9.3e-97 358.2 274 70.1
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 1.5e-94 350.9 368 51.1
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 4.1e-92 342.8 341 51.0
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 5.5e-89 332.4 229 74.7
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 1.5e-86 324.3 212 74.5
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 1.2e-83 314.7 213 73.2
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 4.5e-75 286.2 222 66.7
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 5.0e-74 282.7 174 79.3
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 5.0e-66 256.1 163 76.1
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 3.0e-63 246.9 165 73.9
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 4.8e-61 239.6 124 91.1
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 4.5e-59 233.0 136 84.6
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 3.8e-58 229.9 401 36.7
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 3.7e-53 213.4 302 41.4
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 3.8e-50 203.4 134 76.1
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 1.1e-41 175.3 115 79.1
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 3.2e-36 157.1 112 74.1
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 3.2e-36 157.1 84 89.3
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 1.7e-34 151.4 124 63.7
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 6.6e-34 149.4 93 80.6
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 1.2e-27 128.6 77 83.1
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 8.1e-24 115.9 86 70.9
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 2.2e-21 107.8 242 33.9
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 1.9e-20 104.8 128 52.3
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 3.9e-18 97.1 60 85.0
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 7.3e-17 92.8 60 81.7
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 5.2e-15 86.7 68 64.7
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 8.9e-15 85.9 58 63.8
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 1.2e-14 85.5 50 78.0
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 2.3e-10 71.2 44 70.5


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