Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 9.0e-50 199.9 98 100.0
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 5.5e-47 190.7 96 95.8
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 4.6e-46 187.6 98 90.8
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 9.0e-42 173.3 96 85.4
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.5e-41 172.6 96 83.3
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.9e-40 168.3 99 82.8
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 3.8e-40 167.9 94 85.1
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 8.5e-40 166.8 96 84.4
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.4e-39 166.0 97 84.5
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.9e-39 165.6 97 83.5
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 1.9e-39 165.6 96 81.2
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.2e-39 164.9 96 84.4
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 83.5
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 84.5
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 3.2e-39 164.9 100 81.0
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 4.2e-39 164.5 97 81.4
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 9.4e-39 163.3 94 83.0
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.2e-38 162.9 96 77.1
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 1.6e-38 162.5 100 78.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.6e-38 162.5 100 78.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.6e-38 162.5 100 78.0
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.1e-38 162.2 99 82.8
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.1e-38 162.2 99 82.8
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.1e-38 162.2 99 82.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 2.1e-38 162.2 94 79.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 2.7e-38 161.8 95 82.1
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.6e-38 161.4 97 80.4
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 6.1e-38 160.6 100 79.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 7.9e-38 160.2 96 81.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.0e-37 159.8 99 80.8
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.4e-37 159.5 100 77.0
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.0e-37 158.3 95 77.9
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 3.9e-37 157.9 96 77.1
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 5.1e-37 157.5 98 78.6
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.1e-36 156.4 95 80.0
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.5e-36 156.0 90 82.2
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 2.0e-36 155.6 97 78.4
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.5e-36 155.2 93 77.4
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.5e-36 155.2 97 76.3
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 3.3e-36 154.8 95 75.8
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 77.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.3e-36 154.8 105 73.3
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.3e-36 154.5 88 83.0
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 5.7e-36 154.1 90 81.1
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 5.7e-36 154.1 97 77.3
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 5.7e-36 154.1 90 81.1
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 7.4e-36 153.7 96 75.0
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 9.7e-36 153.3 88 79.5
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 9.7e-36 153.3 95 77.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 9.7e-36 153.3 97 75.3
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 9.7e-36 153.3 97 75.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.3e-35 152.9 97 74.2
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.7e-35 152.5 96 75.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.7e-35 152.5 97 75.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 2.8e-35 151.8 94 76.6
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.8e-35 151.8 100 75.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.7e-35 151.4 96 74.0
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.7e-35 151.4 96 72.9
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 6.3e-35 150.6 95 74.7
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 6.3e-35 150.6 95 74.7
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 6.3e-35 150.6 95 74.7
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 6.3e-35 150.6 95 74.7
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 6.3e-35 150.6 99 74.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 71.9
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 6.3e-35 150.6 92 76.1
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 8.2e-35 150.2 99 74.7
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 8.2e-35 150.2 95 76.8
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 96 72.9
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 95 73.7
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.8e-34 149.1 96 74.0
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.4e-34 148.7 95 75.8
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.4e-34 148.7 92 77.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 72.4
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 6.9e-34 147.1 89 76.4
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 1.5e-33 146.0 97 73.2
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.5e-33 146.0 93 73.1
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.4e-33 144.8 89 76.4
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 4.5e-33 144.4 96 71.9
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 71.9
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 5.9e-33 144.1 96 71.9
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 5.9e-33 144.1 123 63.4
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.0e-32 143.3 94 72.3
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 96 71.9
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.0e-32 143.3 96 71.9
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 2.2e-32 142.1 96 70.8
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 2.2e-32 142.1 89 71.9
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.9e-32 141.7 95 69.5
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.9e-32 141.7 78 83.3
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 3.8e-32 141.4 90 71.1
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 6.5e-32 140.6 94 69.1
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 1.1e-31 139.8 88 72.7
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.5e-31 138.7 93 74.2
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 4.2e-31 137.9 87 74.7
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 5.5e-31 137.5 98 71.4
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 7.2e-31 137.1 78 82.1
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.2e-30 136.3 103 67.0
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 4.7e-30 134.4 87 73.6
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 2.3e-29 132.1 78 80.8
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.3e-29 132.1 92 68.5
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 5.1e-29 131.0 79 81.0
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 6.7e-29 130.6 86 66.3
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.0e-28 129.0 62 100.0
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.4e-28 127.9 82 69.5
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.4e-26 122.9 79 72.2
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.9e-25 117.5 103 62.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 5.0e-24 114.4 80 68.8
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 5.5e-23 110.9 88 63.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.8e-19 97.8 78 57.7
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 6.3e-19 97.4 70 61.4
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.8e-18 95.9 89 53.9
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 9.1e-18 93.6 86 52.3
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.2e-15 85.1 117 47.0
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 1.2e-12 76.6 85 52.9
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.3e-11 73.2 64 57.8
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.7e-11 71.6 43 74.4
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.1e-10 70.1 60 58.3
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.7e-08 62.8 38 68.4
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 8.5e-08 60.5 36 80.6
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 5.5e-07 57.8 53 49.1


User provided reference genes

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