Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 3.0e-103 378.6 207 100.0
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.0e-83 312.8 207 87.9
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 8.2e-77 290.8 207 83.6
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 4.4e-70 268.5 208 75.0
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 8.5e-66 254.2 208 70.7
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 9.5e-41 171.0 191 55.5
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 2.4e-36 156.4 188 55.9
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 9.2e-36 154.5 194 51.5
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 2.0e-35 153.3 201 48.8
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 4.6e-35 152.1 204 50.5
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 6.0e-35 151.8 204 51.5
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 6.0e-35 151.8 203 56.2
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.0e-34 151.0 197 52.8
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 3.9e-34 149.1 206 50.0
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 6.6e-34 148.3 199 47.2
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 1.5e-33 147.1 198 46.0
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 9.5e-33 144.4 186 47.8
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.2e-32 144.1 203 47.3
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.2e-32 144.1 198 49.5
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 1.2e-32 144.1 187 47.6
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.6e-32 143.7 185 56.8
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 2.8e-32 142.9 206 46.6
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 3.6e-32 142.5 197 47.2
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 4.7e-32 142.1 205 50.2
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 6.2e-32 141.7 240 41.7
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 6.2e-32 141.7 214 46.3
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 8.0e-32 141.4 239 41.8
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 1.4e-31 140.6 193 46.6
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 2.3e-31 139.8 205 45.4
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 3.1e-31 139.4 203 47.8
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 3.1e-31 139.4 202 49.0
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 5.2e-31 138.7 194 51.0
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.2e-30 137.5 188 49.5
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 1.5e-30 137.1 171 51.5
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 2.6e-30 136.3 205 43.4
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 4.4e-30 135.6 209 42.6
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 4.4e-30 135.6 207 46.4
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 5.8e-30 135.2 220 49.5
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 5.8e-30 135.2 181 47.0
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 5.8e-30 135.2 192 52.1
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 9.8e-30 134.4 207 45.9
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 9.8e-30 134.4 207 45.9
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 9.8e-30 134.4 228 40.8
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.3e-29 134.0 189 48.7
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.3e-29 134.0 199 45.7
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.7e-29 133.7 202 45.0
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.7e-29 133.7 169 46.2
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.2e-29 133.3 207 45.4
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 3.7e-29 132.5 198 49.0
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 3.7e-29 132.5 213 44.1
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 4.9e-29 132.1 199 45.2
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 4.9e-29 132.1 173 47.4
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 4.9e-29 132.1 182 54.4
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 8.3e-29 131.3 226 42.0
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.1e-28 131.0 205 50.2
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.1e-28 131.0 199 49.2
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 1.1e-28 131.0 197 44.7
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 3.2e-28 129.4 206 41.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 3.2e-28 129.4 198 43.9
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 4.1e-28 129.0 199 42.2
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 9.2e-28 127.9 212 50.0
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.6e-27 127.1 185 45.4
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 2.1e-27 126.7 207 47.3
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 2.7e-27 126.3 226 38.9
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.5e-27 125.9 207 44.9
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 3.0e-26 122.9 180 43.9
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 6.6e-26 121.7 207 42.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 6.6e-26 121.7 198 42.4
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 8.6e-26 121.3 190 43.7
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.1e-25 120.9 205 42.0
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 1.5e-25 120.6 180 47.2
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 3.3e-25 119.4 209 42.6
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 4.3e-25 119.0 204 40.7
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 5.6e-25 118.6 201 40.3
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 9.5e-25 117.9 200 43.0
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 1.2e-24 117.5 212 41.0
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.6e-24 117.1 180 43.3
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 2.8e-24 116.3 158 50.0
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.8e-24 116.3 202 38.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 3.6e-24 115.9 166 45.2
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.1e-23 114.4 205 40.0
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.1e-23 114.4 208 39.4
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 1.1e-23 114.4 203 41.9
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 1.8e-23 113.6 198 42.9
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 4.0e-23 112.5 191 41.9
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 2.6e-22 109.8 189 37.6
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 2.6e-22 109.8 198 41.9
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 3.4e-22 109.4 189 37.6
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 9.9e-22 107.8 189 37.0
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.3e-21 107.5 161 52.8
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.2e-21 106.7 161 42.9
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.9e-20 103.6 171 41.5
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 3.2e-20 102.8 210 41.9
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 3.2e-20 102.8 210 41.9
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 4.1e-20 102.4 202 38.1
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 4.1e-20 102.4 206 41.7
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.5e-19 99.4 162 43.8
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.5e-19 99.4 206 41.3
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 4.6e-19 99.0 220 37.3
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 2.3e-18 96.7 206 40.8
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 5.1e-18 95.5 206 40.3
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.3e-17 92.8 163 39.3
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 9.5e-17 91.3 129 45.7
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.2e-16 90.9 186 40.3
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.1e-15 87.8 194 42.8
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 6.8e-15 85.1 164 43.9
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.6e-14 83.2 164 43.3
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 9.9e-14 81.3 205 40.5
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 6.4e-13 78.6 98 46.9
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.1e-12 77.8 50 76.0
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.9e-12 77.0 145 37.2
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 3.2e-12 76.3 139 42.4
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 2.1e-11 73.6 187 38.5
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.0e-10 71.2 70 54.3
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 3.0e-10 69.7 70 60.0
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 7.3e-09 65.1 153 41.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 9.6e-09 64.7 141 36.2
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 2.6e-06 56.6 68 48.5
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 2.6e-06 56.6 90 46.7
Pp3c9_10530 Physcomitrium patens HOM05D006618 ORTHO05D008291 3.4e-06 56.2 198 35.9


User provided reference genes

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