Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.4e-99 366.3 183 100.0
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 2.7e-87 325.5 183 90.7
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 2.8e-81 305.4 183 85.8
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 1.3e-73 280.0 183 78.7
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.7e-46 189.9 127 78.0
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.7e-46 189.9 127 78.0
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 3.0e-46 189.1 183 59.0
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 5.1e-46 188.3 114 82.5
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 6.6e-46 188.0 114 78.9
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.1e-45 187.2 122 74.6
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 1.5e-45 186.8 113 83.2
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 1.9e-45 186.4 146 67.8
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.3e-45 185.7 170 60.6
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 3.3e-45 185.7 129 72.1
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 5.6e-45 184.9 168 61.9
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 7.3e-45 184.5 120 75.8
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.2e-44 183.7 159 63.5
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.6e-44 183.3 111 81.1
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.6e-44 183.3 111 81.1
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 2.1e-44 183.0 170 58.8
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 2.8e-44 182.6 183 57.9
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 3.6e-44 182.2 105 84.8
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 3.6e-44 182.2 128 73.4
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 4.7e-44 181.8 128 73.4
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 4.7e-44 181.8 128 73.4
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 6.2e-44 181.4 125 74.4
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 6.2e-44 181.4 179 58.7
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 8.1e-44 181.0 127 72.4
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 8.1e-44 181.0 165 60.6
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 8.1e-44 181.0 127 72.4
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.1e-43 180.6 126 72.2
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 3.1e-43 179.1 109 82.6
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 3.1e-43 179.1 103 85.4
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 4.0e-43 178.7 110 77.3
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 4.0e-43 178.7 150 64.0
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 5.2e-43 178.3 165 60.0
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 9.0e-43 177.6 130 70.8
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 1.5e-42 176.8 202 55.9
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.6e-42 176.0 107 79.4
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 2.6e-42 176.0 103 81.6
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.4e-42 175.6 106 82.1
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 4.4e-42 175.3 113 75.2
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 4.4e-42 175.3 128 69.5
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 5.8e-42 174.9 169 60.4
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.8e-42 174.9 111 79.3
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 5.8e-42 174.9 111 79.3
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.3e-41 173.7 122 73.0
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 1.3e-41 173.7 125 70.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.7e-41 173.3 182 56.6
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 2.2e-41 172.9 183 51.9
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 3.8e-41 172.2 103 79.6
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 6.4e-41 171.4 130 67.7
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.9e-40 169.9 169 53.3
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 1.9e-40 169.9 134 66.4
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 2.4e-40 169.5 159 56.6
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 2.4e-40 169.5 107 77.6
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 3.2e-40 169.1 161 56.5
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 4.2e-40 168.7 111 71.2
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 4.2e-40 168.7 166 54.2
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 5.4e-40 168.3 159 55.3
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 5.4e-40 168.3 125 72.0
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 7.1e-40 167.9 141 63.8
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 7.1e-40 167.9 183 54.6
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 7.1e-40 167.9 137 63.5
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 9.3e-40 167.5 166 54.2
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 9.3e-40 167.5 166 54.2
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.6e-39 166.8 161 54.0
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.1e-39 166.4 152 57.2
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.1e-39 166.4 181 55.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.1e-39 166.4 150 59.3
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 2.1e-39 166.4 109 73.4
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.5e-39 165.6 102 76.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 3.5e-39 165.6 173 54.9
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 3.5e-39 165.6 134 64.2
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 4.6e-39 165.2 109 72.5
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 6.0e-39 164.9 113 70.8
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 6.0e-39 164.9 110 71.8
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.0e-38 164.1 119 69.7
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 3.0e-38 162.5 107 72.9
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 8.7e-38 161.0 109 72.5
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 8.7e-38 161.0 115 67.0
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 7.3e-37 157.9 106 72.6
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 9.6e-37 157.5 111 69.4
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 9.6e-37 157.5 180 53.3
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.3e-36 157.1 108 71.3
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 71.2
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 71.2
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 1.3e-36 157.1 111 71.2
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 2.1e-36 156.4 110 70.0
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 6.2e-36 154.8 182 50.0
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 1.1e-35 154.1 114 67.5
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 1.8e-35 153.3 89 83.1
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.2e-34 150.6 165 53.3
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.4e-34 149.1 86 84.9
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 5.8e-34 148.3 101 65.3
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 5.8e-34 148.3 86 82.6
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 2.9e-33 146.0 104 66.3
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.4e-32 142.9 88 79.5
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.7e-30 134.8 99 68.7
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-28 130.6 124 52.4
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-28 130.6 124 52.4
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 1.6e-28 130.2 102 57.8
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 5.3e-27 125.2 110 58.2
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.5e-26 123.6 109 55.0
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 1.1e-11 74.3 37 89.2


User provided reference genes

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