Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 1.2e-77 293.5 188 100.0
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 4.5e-74 281.6 188 90.4
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.1e-63 246.1 193 88.6
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 9.2e-51 204.1 192 78.6
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.7e-42 176.0 188 53.2
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 4.6e-42 175.3 195 53.8
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.0e-41 174.1 188 58.5
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 2.3e-41 172.9 190 55.3
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 6.6e-41 171.4 194 54.6
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 4.3e-40 168.7 189 56.1
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 2.8e-39 166.0 194 55.7
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 3.6e-39 165.6 191 53.9
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.0e-38 162.2 192 53.6
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 5.2e-38 161.8 194 53.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 5.2e-38 161.8 188 52.1
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 8.9e-38 161.0 189 53.4
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 8.9e-38 161.0 189 51.9
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 2.0e-37 159.8 189 52.4
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 4.4e-37 158.7 186 54.3
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 5.8e-37 158.3 189 52.4
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 9.9e-37 157.5 193 51.3
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 1.3e-36 157.1 189 51.9
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.7e-36 156.8 188 52.7
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.9e-36 156.0 190 51.1
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 3.7e-36 155.6 138 60.1
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.7e-36 155.6 188 53.7
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 6.4e-36 154.8 189 48.1
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 8.3e-36 154.5 188 52.7
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 1.1e-35 154.1 189 50.3
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 1.1e-35 154.1 190 51.6
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 3.2e-35 152.5 191 49.7
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 3.2e-35 152.5 188 53.2
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 3.2e-35 152.5 196 49.5
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 1.2e-34 150.6 186 51.6
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 1.2e-34 150.6 189 48.7
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.7e-34 149.4 184 51.1
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 3.5e-34 149.1 191 51.3
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 4.6e-34 148.7 186 51.1
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 4.6e-34 148.7 186 52.2
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 4.6e-34 148.7 189 50.8
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 6.0e-34 148.3 199 53.3
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.0e-33 147.5 195 48.2
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 1.3e-33 147.1 191 48.2
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.3e-33 147.1 188 51.1
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 6.6e-33 144.8 189 48.1
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 6.6e-33 144.8 188 51.6
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 8.6e-33 144.4 189 51.3
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.1e-32 144.1 191 48.7
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 7.3e-32 141.4 188 50.5
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 9.5e-32 141.0 188 61.2
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 9.5e-32 141.0 189 47.1
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.2e-31 140.6 197 58.9
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.6e-31 140.2 132 58.3
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.6e-31 140.2 188 47.9
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 6.2e-31 138.3 157 58.6
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 2.4e-30 136.3 186 60.2
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.0e-29 133.3 196 49.0
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 5.8e-29 131.7 193 48.7
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 9.9e-29 131.0 137 53.3
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 9.9e-29 131.0 191 50.3
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.3e-28 130.6 197 55.3
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 5.4e-27 125.2 130 53.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 5.4e-27 125.2 193 48.2
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 9.2e-27 124.4 191 52.4
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 1.6e-26 123.6 141 51.8
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.7e-25 120.2 152 59.2
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 3.0e-25 119.4 120 52.5
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 2.5e-24 116.3 188 48.9
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 3.3e-24 115.9 148 57.4
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 1.2e-23 114.0 191 45.0
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 2.8e-23 112.8 182 42.3
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 8.1e-23 111.3 188 51.6
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 2.4e-22 109.8 197 48.7
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 6.9e-22 108.2 134 46.3
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 1.2e-21 107.5 136 44.9
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 2.6e-21 106.3 134 44.8
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 7.6e-21 104.8 135 45.9
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 9.9e-21 104.4 149 43.6
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 9.9e-21 104.4 134 44.8
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 9.9e-21 104.4 149 43.6
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 9.9e-21 104.4 149 43.6
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 9.9e-21 104.4 134 44.8
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.3e-20 104.0 197 44.7
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.7e-20 103.6 151 43.7
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 3.8e-20 102.4 198 49.0
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 1.4e-19 100.5 135 44.4
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 4.2e-19 99.0 152 42.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 5.4e-19 98.6 138 42.0
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 1.2e-18 97.4 146 43.2
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 1.6e-18 97.1 194 40.7
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 4.6e-18 95.5 130 46.2
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 6.0e-18 95.1 121 50.4
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.0e-17 94.4 197 39.1
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.0e-17 92.8 197 46.7
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 3.9e-17 92.4 188 49.5
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 1.5e-16 90.5 193 37.3
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 7.3e-16 88.2 189 48.7
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 4.8e-15 85.5 188 48.4
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 6.2e-15 85.1 131 41.2
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.0e-13 80.1 139 54.0
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 1.3e-12 77.4 75 53.3
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 8.4e-12 74.7 184 45.7
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 7.9e-10 68.2 188 45.7
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 3.9e-09 65.9 189 30.7
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.1e-08 64.3 172 30.8
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 1.9e-08 63.5 87 46.0
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 3.7e-07 59.3 71 45.1


User provided reference genes

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