Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 2.0e-124 449.1 226 100.0
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 6.3e-123 444.1 226 98.7
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 2.9e-112 408.7 214 95.3
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 2.6e-108 395.6 226 89.8
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 1.6e-105 386.3 226 86.3
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 3.5e-105 385.2 226 84.1
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.1e-103 380.2 224 83.9
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 1.1e-103 380.2 225 84.0
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 6.2e-102 374.4 230 82.2
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.6e-100 369.0 226 82.7
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 3.4e-100 368.6 231 80.1
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 3.4e-100 368.6 225 80.9
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 3.4e-100 368.6 226 82.7
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.4e-100 368.2 226 82.3
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 5.8e-100 367.9 226 81.9
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 9.8e-100 367.1 226 81.9
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 3.7e-99 365.2 226 81.0
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 3.7e-99 365.2 226 80.5
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.9e-99 364.8 226 81.9
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.4e-98 362.5 226 81.9
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.4e-98 362.5 226 81.9
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 9.2e-98 360.5 226 79.6
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 2.7e-97 359.0 226 79.2
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 1.7e-96 356.3 225 77.3
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 3.0e-96 355.5 214 83.6
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.5e-95 353.2 225 79.6
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 1.9e-95 352.8 226 77.9
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 3.3e-95 352.1 226 77.9
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 3.3e-95 352.1 226 80.1
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 4.3e-95 351.7 229 75.1
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 4.3e-95 351.7 228 74.6
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 9.5e-95 350.5 228 75.0
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 9.5e-95 350.5 226 79.6
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 9.5e-95 350.5 227 76.2
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 1.6e-94 349.7 222 78.4
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 2.1e-94 349.4 226 76.5
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 3.6e-94 348.6 221 77.4
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 6.2e-94 347.8 225 74.2
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 1.1e-93 347.1 225 74.2
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 1.4e-93 346.7 225 74.2
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 1.8e-93 346.3 227 73.6
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 2.3e-93 345.9 226 73.9
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 3.1e-93 345.5 226 77.0
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 3.1e-93 345.5 250 71.6
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 5.2e-93 344.7 226 76.5
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 6.8e-93 344.4 220 75.9
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 1.5e-92 343.2 225 75.1
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 1.5e-92 343.2 225 75.1
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.0e-92 342.8 226 78.3
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 3.4e-92 342.0 217 79.3
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 4.4e-92 341.7 226 78.3
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 5.8e-92 341.3 220 75.5
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 9.9e-92 340.5 224 75.4
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 1.7e-91 339.7 224 73.2
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 2.9e-91 339.0 225 73.3
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 2.9e-91 339.0 225 73.8
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 2.9e-91 339.0 232 71.6
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 2.9e-91 339.0 232 71.6
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 4.9e-91 338.2 227 72.2
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 4.9e-91 338.2 232 71.1
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 6.4e-91 337.8 225 71.6
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 6.4e-91 337.8 224 74.6
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 8.3e-91 337.4 226 73.5
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 1.1e-90 337.0 220 75.5
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 1.1e-90 337.0 219 74.9
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 3.2e-90 335.5 222 74.8
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 3.2e-90 335.5 226 73.0
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 4.1e-90 335.1 229 72.9
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 9.2e-90 334.0 222 73.9
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 9.2e-90 334.0 226 77.0
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 9.2e-90 334.0 218 74.3
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 9.2e-90 334.0 227 71.8
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 1.2e-89 333.6 223 73.1
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 1.2e-89 333.6 225 72.0
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 1.6e-89 333.2 228 72.4
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 2.1e-89 332.8 225 72.9
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 7.8e-89 330.9 224 73.7
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 1.0e-88 330.5 212 73.6
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 1.7e-88 329.7 225 72.4
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 1.7e-88 329.7 228 72.8
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 3.0e-88 328.9 222 72.1
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 5.1e-88 328.2 226 71.2
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 5.1e-88 328.2 226 71.2
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 5.1e-88 328.2 220 74.5
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 6.6e-88 327.8 226 72.1
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 1.1e-87 327.0 224 73.2
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 1.1e-87 327.0 225 70.2
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 2.5e-87 325.9 226 71.7
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 4.3e-87 325.1 222 72.5
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 3.6e-86 322.0 224 71.9
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 1.1e-85 320.5 229 69.0
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 1.5e-84 316.6 226 71.2
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 2.6e-84 315.8 327 55.4
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 1.3e-83 313.5 220 70.9
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 2.2e-83 312.8 221 69.7
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 4.9e-83 311.6 224 67.4
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 6.4e-83 311.2 225 69.3
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 1.9e-82 309.7 219 69.9
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 4.2e-82 308.5 224 67.9
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 7.1e-82 307.8 227 68.3
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 7.1e-82 307.8 358 51.7
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 9.3e-82 307.4 223 67.3
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.7e-81 305.8 219 69.4
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 2.7e-81 305.8 219 69.9
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 1.0e-80 303.9 225 68.0
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 1.7e-80 303.1 219 69.4
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 2.3e-80 302.8 219 69.4
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 3.9e-80 302.0 219 67.1
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 6.6e-80 301.2 219 68.9
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 8.7e-80 300.8 226 65.9
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 2.5e-79 299.3 221 65.6
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 4.3e-79 298.5 221 65.6
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 7.3e-79 297.7 224 65.2
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 4.8e-78 295.0 225 66.7
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 1.1e-77 293.9 308 52.6
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 1.8e-77 293.1 219 67.1
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 4.4e-76 288.5 220 64.5
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 1.7e-72 276.6 221 60.6
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 3.0e-72 275.8 220 59.1
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 8.7e-72 274.2 220 60.5
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 2.5e-71 272.7 174 78.7
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 1.4e-69 266.9 220 57.3
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 4.9e-67 258.5 224 61.2
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 4.6e-65 251.9 153 81.0
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 9.6e-63 244.2 152 78.9
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 9.0e-61 237.7 153 74.5
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 6.5e-59 231.5 152 75.7
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 1.4e-58 230.3 225 58.7
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 2.1e-57 226.5 142 76.1
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 3.0e-56 222.6 176 64.2
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 1.1e-53 214.2 165 66.7
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 1.0e-51 207.6 122 86.1
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 9.3e-50 201.1 191 57.6
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 7.9e-49 198.0 130 73.8
CSS0002150 Camellia sinensis var. sinensis HOM05D004698 ORTHO05D005699 9.7e-47 191.0 107 86.0
Cpa.g.sc117.1 Carica papaya HOM05D004698 ORTHO05D005699 3.4e-44 182.6 99 88.9
A02p05700 Brassica napus HOM05D004698 ORTHO05D005699 4.5e-44 182.2 111 79.3
BraA02t05522Z Brassica rapa HOM05D004698 ORTHO05D005699 4.5e-44 182.2 111 79.3
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 1.9e-42 176.8 119 73.1
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 4.2e-42 175.6 118 71.2
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 5.5e-42 175.3 153 61.4
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 2.2e-38 163.3 120 69.2
MD03G1017600 Malus domestica HOM05D004698 ORTHO05D005699 3.7e-38 162.5 95 82.1
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 3.7e-38 162.5 118 69.5
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 3.9e-32 142.5 87 80.5
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 1.1e-31 141.0 190 38.4
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 2.2e-30 136.7 107 62.6
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 3.5e-28 129.4 129 60.5
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 4.8e-22 109.0 81 67.9
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 1.4e-16 90.9 57 78.9
MD03G1017500 Malus domestica HOM05D004698 ORTHO05D005699 2.0e-12 77.0 47 80.9
Potri.006G191700 Populus trichocarpa HOM05D004698 ORTHO05D005699 2.0e-12 77.0 77 48.1
PRCOL_00002610 Prasinoderma coloniale HOM05D004698 ORTHO05D333686 2.0e-12 77.0 197 33.5
MD13G1112600 Malus domestica HOM05D000829 ORTHO05D000690 3.0e-08 63.2 48 66.7


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