Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015621.2 Cucumis melo HOM05D008193 ORTHO05D010324 1.1e-69 266.5 135 100.0
BraSC77t46658Z Brassica rapa HOM05D008193 ORTHO05D010324 1.7e-46 189.5 128 76.6
CsaV3_UNG209710 Cucumis sativus L. HOM05D008193 ORTHO05D010324 3.4e-31 138.7 88 83.0
CANSAT16G0055 Cannabis sativa HOM05D008193 ORTHO05D010324 8.4e-30 134.0 88 81.8
Sed0007015 Sechium edule HOM05D008193 ORTHO05D010324 8.4e-30 134.0 88 81.8
SHI35587 Sapria himalayana HOM05D008193 ORTHO05D010324 2.4e-29 132.5 129 59.7
Potri.007G061841 Populus trichocarpa HOM05D008193 ORTHO05D010324 3.2e-29 132.1 88 79.5
Aa31csc464G50 Aethionema arabicum HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
AT2G07696 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
ATMG01270 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
BcaC09g49584 Brassica carinata HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
BolSC28t60333H Brassica oleracea HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
BolSC28t60437H Brassica oleracea HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
BraSC48t46277Z Brassica rapa HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
BraSC77t46639Z Brassica rapa HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
CARHR283470 Cardamine hirsuta HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
Sp3g25900 Schrenkiella parvula HOM05D008193 ORTHO05D010324 4.2e-29 131.7 88 80.7
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 7.1e-29 131.0 88 78.4
AUR62041694 Chenopodium quinoa HOM05D008193 ORTHO05D010324 1.2e-28 130.2 88 77.3
Cc00_g01650 Coffea canephora HOM05D008193 ORTHO05D010324 1.2e-28 130.2 88 76.1
MBI04_g15068_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 1.2e-28 130.2 87 80.5
CsaV3_5G020360 Cucumis sativus L. HOM05D008193 ORTHO05D010324 3.5e-28 128.6 88 77.3
Nn003s41380 Nelumbo nucifera HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 78.4
Nn1g09926 Nelumbo nucifera HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 78.4
Nn1g10017 Nelumbo nucifera HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 78.4
Oeu040256.1 Olea europaea HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 75.0
Hund27588 Selenicereus undatus HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 76.1
Hund27818 Selenicereus undatus HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 76.1
Hund28868 Selenicereus undatus HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 76.1
Hund28881 Selenicereus undatus HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 76.1
Hund29086 Selenicereus undatus HOM05D008193 ORTHO05D010324 7.8e-28 127.5 88 76.1
AUR62042350 Chenopodium quinoa HOM05D008193 ORTHO05D010324 1.0e-27 127.1 88 76.1
Cpa.g.sc263.27 Carica papaya HOM05D008193 ORTHO05D010324 1.3e-27 126.7 89 77.5
Aqoxy3G01138 Aquilegia oxysepala HOM05D008193 ORTHO05D010324 3.0e-27 125.6 88 77.3
MELO3C023756.2 Cucumis melo HOM05D008193 ORTHO05D010324 3.9e-27 125.2 79 81.0
RcHm_v2.0_MTg0498331 Rosa chinensis HOM05D008193 ORTHO05D010324 6.6e-27 124.4 88 78.4
AUR62026427 Chenopodium quinoa HOM05D008193 ORTHO05D010324 3.3e-26 122.1 88 72.7
DCAR_032456 Daucus carota HOM05D008193 ORTHO05D010324 7.3e-26 120.9 88 72.7
Os12g0524750 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 1.3e-25 120.2 88 73.9
AUR62026431 Chenopodium quinoa HOM05D008193 ORTHO05D010324 4.8e-25 118.2 88 70.5
vmacro19456 Vaccinium macrocarpon HOM05D008193 ORTHO05D010324 1.4e-24 116.7 88 61.4
Rhsim10G0162200 Rhododendron simsii HOM05D008193 ORTHO05D010324 3.1e-24 115.5 88 62.5
CDE02G0514 Ceratophyllum demersum HOM05D008193 ORTHO05D010324 1.2e-23 113.6 88 68.2
Lsat_1_v5_gn_4_134101 Lactuca sativa HOM05D008193 ORTHO05D010324 8.4e-22 107.5 84 63.1
AL6G41420 Arabidopsis lyrata HOM05D008193 ORTHO05D010324 1.2e-20 103.6 68 82.4
PSO017G1916 Papaver somniferum HOM05D008193 ORTHO05D010324 6.0e-20 101.3 87 59.8
PSO170G6554 Papaver somniferum HOM05D008193 ORTHO05D010324 6.0e-20 101.3 87 59.8
HanXRQChr09g0260701 Helianthus annuus HOM05D008193 ORTHO05D010324 3.0e-19 99.0 89 55.1
HanXRQChr08g0225561 Helianthus annuus HOM05D008193 ORTHO05D010324 6.7e-19 97.8 89 55.1
Sc11g0004460 Simmondsia chinensis HOM05D008193 ORTHO05D010324 1.5e-18 96.7 58 84.5
SEGI_25774 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 7.4e-18 94.4 85 60.0
SEGI_39408 Sequoiadendron giganteum HOM05D008193 ORTHO05D010324 7.4e-18 94.4 85 60.0
Gorai.001G165300 Gossypium raimondii HOM05D008193 ORTHO05D010324 2.8e-17 92.4 53 86.8
MBI07_g31516_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 6.2e-17 91.3 63 77.8
MBI14_g38262_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 9.0e-16 87.4 79 63.3
MELO3C021560.2 Cucumis melo HOM05D008193 ORTHO05D010324 7.1e-13 77.8 88 55.7
Os09g0519601 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 1.2e-12 77.0 66 62.1
SabraMtG0002400 Salix brachista HOM05D008193 ORTHO05D010324 7.4e-10 67.8 65 58.5
SHI46986 Sapria himalayana HOM05D008193 ORTHO05D010324 2.1e-09 66.2 53 62.3
SHI29515 Sapria himalayana HOM05D049097 ORTHO05D010324 4.8e-09 65.1 47 72.3
SMO364G0207 Selaginella moellendorffii HOM05D008193 ORTHO05D002596 6.2e-09 64.7 81 42.0
SHI16089 Sapria himalayana HOM05D008193 ORTHO05D010324 1.3e-06 57.0 68 45.6


User provided reference genes

Program Settings