Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C015170.2 Cucumis melo HOM05D006549 ORTHO05D008080 8.2e-69 263.8 157 100.0
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 1.8e-60 236.1 153 92.2
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 2.7e-56 222.2 151 90.7
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 1.0e-42 177.2 146 76.0
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 4.5e-35 151.8 99 77.8
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 1.0e-34 150.6 104 71.2
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 1.1e-33 147.1 101 72.3
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 2.5e-33 146.0 101 71.3
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 9.4e-33 144.1 158 57.6
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.2e-32 143.7 101 69.3
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 1.4e-31 140.2 93 74.2
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.4e-31 140.2 89 73.0
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 4.0e-31 138.7 104 66.3
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 1.2e-30 137.1 96 71.9
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 1.5e-30 136.7 96 67.7
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 2.0e-30 136.3 86 73.3
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 5.7e-30 134.8 103 68.0
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 1.3e-29 133.7 100 65.0
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 1.3e-29 133.7 92 73.9
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 2.8e-29 132.5 100 65.0
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 2.8e-29 132.5 96 69.8
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 4.8e-29 131.7 94 70.2
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 6.3e-29 131.3 101 64.4
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 8.2e-29 131.0 91 71.4
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 1.1e-28 130.6 157 54.8
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 2.4e-28 129.4 100 67.0
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 3.1e-28 129.0 94 67.0
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 3.1e-28 129.0 94 67.0
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 4.1e-28 128.6 157 58.6
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 4.1e-28 128.6 83 73.5
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 5.3e-28 128.3 101 64.4
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 5.3e-28 128.3 100 66.0
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 7.0e-28 127.9 100 67.0
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 9.1e-28 127.5 94 69.1
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 1.2e-27 127.1 154 55.2
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 1.2e-27 127.1 94 67.0
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 1.2e-27 127.1 156 55.8
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 2.0e-27 126.3 100 68.0
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 2.0e-27 126.3 100 68.0
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 2.7e-27 125.9 94 66.0
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 7.7e-27 124.4 94 67.0
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 1.3e-26 123.6 100 62.0
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 1.7e-26 123.2 100 62.0
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 1.7e-26 123.2 99 62.6
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 2.2e-26 122.9 85 67.1
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.2e-26 122.9 100 61.0
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 2.2e-26 122.9 84 67.9
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 3.8e-26 122.1 84 66.7
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 3.8e-26 122.1 84 67.9
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 3.8e-26 122.1 109 57.8
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 3.8e-26 122.1 96 65.6
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 5.0e-26 121.7 84 67.9
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 5.0e-26 121.7 84 66.7
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 5.0e-26 121.7 84 70.2
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 6.5e-26 121.3 89 67.4
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 8.5e-26 120.9 93 63.4
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 8.5e-26 120.9 84 66.7
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 8.5e-26 120.9 154 55.2
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 1.1e-25 120.6 84 66.7
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.5e-25 120.2 84 67.9
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 1.9e-25 119.8 100 59.0
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 1.9e-25 119.8 99 62.6
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 1.9e-25 119.8 86 68.6
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 1.9e-25 119.8 99 59.6
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 3.2e-25 119.0 79 67.1
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 4.2e-25 118.6 101 56.4
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 7.2e-25 117.9 96 60.4
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 7.2e-25 117.9 94 61.7
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 9.4e-25 117.5 101 63.4
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 1.2e-24 117.1 100 61.0
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 1.2e-24 117.1 100 61.0
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 1.6e-24 116.7 96 63.5
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 3.6e-24 115.5 154 49.4
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 3.6e-24 115.5 89 68.5
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 4.7e-24 115.2 99 62.6
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 6.1e-24 114.8 95 58.9
HPP92_011577 Vanilla planifolia HOM05D006549 ORTHO05D008080 6.1e-24 114.8 98 60.2
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 8.0e-24 114.4 83 68.7
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 8.0e-24 114.4 73 76.7
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 1.4e-23 113.6 92 64.1
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 1.8e-23 113.2 90 64.4
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 1.8e-23 113.2 81 66.7
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 2.3e-23 112.8 159 50.9
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 4.0e-23 112.1 97 59.8
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 6.8e-23 111.3 74 73.0
BolC3t13160H Brassica oleracea HOM05D006549 ORTHO05D008080 1.2e-22 110.5 77 66.2
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 1.5e-22 110.2 84 65.5
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 3.4e-22 109.0 91 58.2
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 3.4e-22 109.0 79 63.3
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 5.7e-22 108.2 101 58.4
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 1.3e-21 107.1 99 57.6
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 1.7e-21 106.7 127 63.8
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 2.2e-21 106.3 100 56.0
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 3.7e-21 105.5 73 65.8
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 4.8e-21 105.1 98 56.1
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 1.1e-20 104.0 162 51.2
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 3.1e-20 102.4 80 63.8
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 9.1e-20 100.9 85 58.8
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 2.7e-19 99.4 73 64.4
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 7.7e-19 97.8 75 64.0
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 1.3e-18 97.1 74 64.9
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 3.8e-18 95.5 100 50.0
Cpa.g.c41750 Carica papaya HOM05D006549 ORTHO05D008080 5.0e-18 95.1 62 71.0
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 1.4e-15 87.0 69 60.9
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 5.7e-14 81.6 91 46.2
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 8.9e-07 57.8 93 33.3
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 2.0e-06 56.6 92 37.0
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 9.8e-06 54.3 66 43.9


User provided reference genes

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