Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014772.2 Cucumis melo HOM05D000808 ORTHO05D008762 9.9e-60 233.4 132 100.0
MELO3C020512.2 Cucumis melo HOM05D000808 ORTHO05D008762 5.3e-21 104.8 71 76.1
CsaV3_1G036560 Cucumis sativus L. HOM05D000808 ORTHO05D008762 2.0e-20 102.8 71 76.1
ClCG03G000350 Citrullus lanatus HOM05D000808 ORTHO05D008762 2.9e-19 99.0 71 70.4
Actinidia32615 Actinidia chinensis HOM05D000808 ORTHO05D008762 8.5e-19 97.4 89 60.7
CSS0021657 Camellia sinensis var. sinensis HOM05D000808 ORTHO05D008762 1.4e-18 96.7 83 62.7
Sed0026058 Sechium edule HOM05D000808 ORTHO05D008762 1.4e-18 96.7 71 69.0
Sc21g0005250 Simmondsia chinensis HOM05D000808 ORTHO05D008762 1.4e-18 96.7 89 58.4
COL.COLO4_11140 Corchorus olitorius HOM05D000808 ORTHO05D008762 1.9e-18 96.3 83 63.9
Dinv28691 Davidia involucrata HOM05D000808 ORTHO05D008762 7.2e-18 94.4 71 66.2
Migut.D00850 Erythranthe guttata HOM05D000808 ORTHO05D008762 7.2e-18 94.4 71 62.0
Oeu027587.1 Olea europaea HOM05D000808 ORTHO05D008762 7.2e-18 94.4 71 63.4
TAR623G1192 Trochodendron aralioides HOM05D000808 ORTHO05D008762 7.2e-18 94.4 89 58.4
CiPaw.14G054600 Carya illinoinensis HOM05D000808 ORTHO05D008762 1.2e-17 93.6 71 64.8
Thecc.09G356900 Theobroma cacao HOM05D000808 ORTHO05D008762 1.6e-17 93.2 71 63.4
vmacro02924 Vaccinium macrocarpon HOM05D000808 ORTHO05D008762 1.6e-17 93.2 72 65.3
Lj2C1092T16 Lonicera japonica HOM05D000808 ORTHO05D008762 3.6e-17 92.0 72 62.5
Medtr3g031360 Medicago truncatula HOM05D000808 ORTHO05D008762 4.7e-17 91.7 71 63.4
EL10Ac7g15911 Beta vulgaris HOM05D000808 ORTHO05D008762 6.1e-17 91.3 83 59.0
Cc01_g14790 Coffea canephora HOM05D000808 ORTHO05D008762 6.1e-17 91.3 71 62.0
TWI79G1460 Tripterygium wilfordii HOM05D000808 ORTHO05D008762 6.1e-17 91.3 71 64.8
Duzib168G1180 Durio zibethinus HOM05D000808 ORTHO05D008762 8.0e-17 90.9 83 59.0
Eucgr.J01861 Eucalyptus grandis HOM05D000808 ORTHO05D008762 8.0e-17 90.9 71 62.0
Rhsim13G0064900 Rhododendron simsii HOM05D000808 ORTHO05D008762 8.0e-17 90.9 71 63.4
Cfa011770 Carpinus fangiana HOM05D000808 ORTHO05D008762 1.0e-16 90.5 71 63.4
Ciclev10028878m.g Citrus clementina HOM05D000808 ORTHO05D008762 1.0e-16 90.5 83 59.0
Haze_24405 Corylus avellana HOM05D000808 ORTHO05D008762 1.0e-16 90.5 88 56.8
arahy.Tifrunner.gnm1.ann1.EIFC1U Arachis hypogaea HOM05D000808 ORTHO05D008762 1.8e-16 89.7 71 60.6
Lalb_Chr15g0083241 Lupinus albus HOM05D000808 ORTHO05D008762 1.8e-16 89.7 71 62.0
Manes.18G142800 Manihot esculenta HOM05D000808 ORTHO05D008762 1.8e-16 89.7 71 62.0
QL01p026446 Quercus lobata HOM05D000808 ORTHO05D008762 1.8e-16 89.7 71 63.4
Gohir.A05G108900 Gossypium hirsutum HOM05D000808 ORTHO05D008762 2.3e-16 89.4 71 60.6
Gohir.D05G109000 Gossypium hirsutum HOM05D000808 ORTHO05D008762 2.3e-16 89.4 71 60.6
Gorai.009G113300 Gossypium raimondii HOM05D000808 ORTHO05D008762 2.3e-16 89.4 71 60.6
Lj6g0010859 Lotus japonicus HOM05D000808 ORTHO05D008762 2.3e-16 89.4 71 60.6
HanXRQChr05g0132391 Helianthus annuus HOM05D000808 ORTHO05D008762 3.0e-16 89.0 71 62.0
Os01g0164600 Oryza sativa ssp. japonica HOM05D000808 ORTHO05D008762 3.0e-16 89.0 75 58.7
arahy.Tifrunner.gnm1.ann1.R1GXAR Arachis hypogaea HOM05D000808 ORTHO05D008762 3.9e-16 88.6 71 59.2
Glyma.18G057500 Glycine max HOM05D000808 ORTHO05D008762 3.9e-16 88.6 71 59.2
Lsat_1_v5_gn_5_174581 Lactuca sativa HOM05D000808 ORTHO05D008762 3.9e-16 88.6 71 60.6
arahy.Tifrunner.gnm1.ann1.K1WGVP Arachis hypogaea HOM05D000808 ORTHO05D008762 5.2e-16 88.2 69 60.9
MD11G1056600 Malus domestica HOM05D000808 ORTHO05D008762 5.2e-16 88.2 83 59.0
ECA248G2822 Erigeron canadensis HOM05D000808 ORTHO05D008762 8.8e-16 87.4 71 59.2
PSO801G0673 Papaver somniferum HOM05D000808 ORTHO05D008762 8.8e-16 87.4 71 56.3
Phvul.006G073500 Phaseolus vulgaris HOM05D000808 ORTHO05D008762 8.8e-16 87.4 71 57.7
Cpa.g.sc2.366 Carica papaya HOM05D000808 ORTHO05D008762 1.1e-15 87.0 71 60.6
Ca_15004_v3 Cicer arietinum L. HOM05D000808 ORTHO05D008762 1.1e-15 87.0 71 62.0
PSO339G4786 Papaver somniferum HOM05D000808 ORTHO05D008762 1.5e-15 86.7 71 56.3
unitig_60.g25706 Utricularia gibba HOM05D000808 ORTHO05D008762 1.5e-15 86.7 71 56.3
Prupe.6G049100 Prunus persica HOM05D000808 ORTHO05D008762 2.0e-15 86.3 71 60.6
MBI03_g38982_MAGBIO Magnolia biondii HOM05D000808 ORTHO05D008762 2.6e-15 85.9 89 52.8
Potri.001G282500 Populus trichocarpa HOM05D000808 ORTHO05D008762 2.6e-15 85.9 71 62.0
VMungo0540G0665 Vigna mungo HOM05D000808 ORTHO05D008762 2.6e-15 85.9 71 56.3
Aqoxy2G00793 Aquilegia oxysepala HOM05D000808 ORTHO05D008762 3.3e-15 85.5 71 59.2
AUR62001881 Chenopodium quinoa HOM05D000808 ORTHO05D008762 3.3e-15 85.5 71 62.0
Psat5g153360 Pisum sativum HOM05D000808 ORTHO05D008762 3.3e-15 85.5 71 60.6
TPR.G35618 Trifolium pratense HOM05D000808 ORTHO05D008762 3.3e-15 85.5 69 60.9
GSVIVG01024641001 Vitis vinifera HOM05D000808 ORTHO05D008762 3.3e-15 85.5 71 57.7
FAN21G0741 Fragaria x ananassa HOM05D000808 ORTHO05D008762 5.7e-15 84.7 83 53.0
FAN21G1064 Fragaria x ananassa HOM05D000808 ORTHO05D008762 5.7e-15 84.7 83 53.0
FAN25G2004 Fragaria x ananassa HOM05D000808 ORTHO05D008762 5.7e-15 84.7 83 53.0
PGR119G1417 Punica granatum HOM05D000808 ORTHO05D008762 5.7e-15 84.7 71 59.2
CDE04G2355 Ceratophyllum demersum HOM05D000808 ORTHO05D008762 9.7e-15 84.0 75 56.0
AUR62006519 Chenopodium quinoa HOM05D000808 ORTHO05D008762 1.3e-14 83.6 71 60.6
RcHm_v2.0_Chr5g0071531 Rosa chinensis HOM05D000808 ORTHO05D008762 1.3e-14 83.6 71 56.3
SEGI_39915 Sequoiadendron giganteum HOM05D000808 ORTHO05D008762 1.3e-14 83.6 71 57.7
Atru.BG.110.p Acer truncatum HOM05D000808 ORTHO05D008762 2.8e-14 82.4 74 55.4
FAN11G1229 Fragaria x ananassa HOM05D000808 ORTHO05D008762 2.8e-14 82.4 83 51.8
FAN16G1910 Fragaria x ananassa HOM05D000808 ORTHO05D008762 2.8e-14 82.4 83 51.8
THA.LOC104800772 Tarenaya hassleriana HOM05D000808 ORTHO05D008762 2.8e-14 82.4 89 51.7
ATR0174G037 Amborella trichopoda HOM05D000808 ORTHO05D008762 3.7e-14 82.0 71 56.3
CANSAT54G1294 Cannabis sativa HOM05D000808 ORTHO05D008762 3.7e-14 82.0 71 54.9
FvH4_3g39680 Fragaria vesca HOM05D000808 ORTHO05D008762 3.7e-14 82.0 83 50.6
Hund05027 Selenicereus undatus HOM05D000808 ORTHO05D008762 3.7e-14 82.0 71 56.3
Peaxi162Scf00053g01517 Petunia axillaris HOM05D000808 ORTHO05D008762 4.8e-14 81.6 83 54.2
Zm00001eb123430 Zea mays HOM05D000808 ORTHO05D008762 4.8e-14 81.6 75 54.7
BcaB02g10306 Brassica carinata HOM05D000808 ORTHO05D008762 6.3e-14 81.3 70 55.7
Thhalv10016997m.g Eutrema salsugineum HOM05D000808 ORTHO05D008762 8.2e-14 80.9 70 57.1
Nitab4.5_0004174g0070 Nicotiana tabacum HOM05D000808 ORTHO05D008762 8.2e-14 80.9 83 55.4
AL4G25000 Arabidopsis lyrata HOM05D000808 ORTHO05D008762 1.1e-13 80.5 70 57.1
Nitab4.5_0000967g0010 Nicotiana tabacum HOM05D000808 ORTHO05D008762 1.1e-13 80.5 83 53.0
Aa31LG5G6510 Aethionema arabicum HOM05D000808 ORTHO05D008762 1.4e-13 80.1 72 54.2
MD03G1055500 Malus domestica HOM05D000808 ORTHO05D008762 1.8e-13 79.7 71 57.7
AT2G30170 Arabidopsis thaliana HOM05D000808 ORTHO05D008762 2.4e-13 79.3 70 55.7
Carub.0004s1133 Capsella rubella HOM05D000808 ORTHO05D008762 2.4e-13 79.3 70 55.7
Sp4g12770 Schrenkiella parvula HOM05D000808 ORTHO05D008762 2.4e-13 79.3 70 57.1
A05p15250 Brassica napus HOM05D001083 ORTHO05D001637 3.1e-13 79.0 70 54.3
BcaC02g11101 Brassica carinata HOM05D000808 ORTHO05D008762 5.3e-13 78.2 70 52.9
C04p20410 Brassica napus HOM05D001083 ORTHO05D001637 5.3e-13 78.2 70 52.9
BolC4t23569H Brassica oleracea HOM05D001083 ORTHO05D001637 5.3e-13 78.2 70 52.9
BraA05t20445Z Brassica rapa HOM05D000808 ORTHO05D008762 5.3e-13 78.2 70 52.9
CARHR123490 Cardamine hirsuta HOM05D000808 ORTHO05D008762 7.0e-13 77.8 70 54.3
CAN.G1678.4 Capsicum annuum HOM05D000808 ORTHO05D008762 2.0e-12 76.3 89 48.3
Solyc06g007350.4 Solanum lycopersicum HOM05D000808 ORTHO05D008762 2.6e-12 75.9 89 49.4
Sopen06g002280 Solanum pennellii HOM05D000808 ORTHO05D008762 2.6e-12 75.9 89 49.4
Medtr2g095720 Medicago truncatula HOM05D002446 ORTHO05D002941 7.7e-12 74.3 54 64.8
PGSC0003DMG400020560 Solanum tuberosum HOM05D000808 ORTHO05D008762 1.0e-11 73.9 83 49.4
Pp3c1_200 Physcomitrium patens HOM05D000808 ORTHO05D008762 6.5e-11 71.2 83 41.0
Actinidia23204 Actinidia chinensis HOM05D000808 ORTHO05D008762 7.2e-10 67.8 56 60.7
HPP92_006775 Vanilla planifolia HOM05D000808 ORTHO05D008762 7.2e-10 67.8 75 45.3
A04p22950 Brassica napus HOM05D000808 ORTHO05D008762 3.6e-09 65.5 77 45.5
BraA04t17830Z Brassica rapa HOM05D000808 ORTHO05D008762 3.6e-09 65.5 77 45.5
Pp3c11_760 Physcomitrium patens HOM05D000808 ORTHO05D008762 3.6e-09 65.5 71 43.7
SMO347G0379 Selaginella moellendorffii HOM05D000808 ORTHO05D008762 1.0e-08 63.9 71 39.4
AagrBONN_evm.TU.Sc2ySwM_362.517 Anthoceros agrestis HOM05D000808 ORTHO05D008762 1.8e-08 63.2 82 40.2
Mapoly0071s0101 Marchantia polymorpha HOM05D000808 ORTHO05D008762 8.8e-08 60.8 107 31.8
BcaC05g28727 Brassica carinata HOM05D015732 ORTHO05D002271 2.2e-06 56.2 57 47.4


User provided reference genes

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