Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014714.2 Cucumis melo HOM05D007263 ORTHO05D009187 1.8e-87 325.9 165 100.0
ClCG02G024290 Citrullus lanatus HOM05D007263 ORTHO05D009187 1.8e-63 246.1 162 82.1
CsaV3_4G017420 Cucumis sativus L. HOM05D007263 ORTHO05D009187 3.9e-53 211.8 158 75.3
Sed0004996 Sechium edule HOM05D007263 ORTHO05D009187 8.6e-53 210.7 179 68.2
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla HOM05D007263 ORTHO05D009187 6.0e-38 161.4 101 76.2
Ca_16255_v3 Cicer arietinum L. HOM05D007263 ORTHO05D009187 7.8e-38 161.0 102 73.5
FAN16G1710 Fragaria x ananassa HOM05D007263 ORTHO05D009187 3.9e-37 158.7 101 74.3
TWI79G1263 Tripterygium wilfordii HOM05D007263 ORTHO05D009187 3.9e-37 158.7 101 74.3
Dinv32124 Davidia involucrata HOM05D007263 ORTHO05D009187 5.1e-37 158.3 99 75.8
PSO339G3146 Papaver somniferum HOM05D007263 ORTHO05D009187 5.1e-37 158.3 129 67.4
Atru.chr3.2913 Acer truncatum HOM05D007263 ORTHO05D009187 8.6e-37 157.5 139 60.4
FvH4_3g27180 Fragaria vesca HOM05D007263 ORTHO05D009187 8.6e-37 157.5 101 73.3
FAN11G0122 Fragaria x ananassa HOM05D007263 ORTHO05D009187 8.6e-37 157.5 101 73.3
MD11G1181300 Malus domestica HOM05D007263 ORTHO05D009187 8.6e-37 157.5 147 58.5
FAN25G1860 Fragaria x ananassa HOM05D007263 ORTHO05D009187 1.1e-36 157.1 100 74.0
RcHm_v2.0_Chr5g0049851 Rosa chinensis HOM05D007263 ORTHO05D009187 1.1e-36 157.1 101 73.3
Cfa010246 Carpinus fangiana HOM05D007263 ORTHO05D009187 1.5e-36 156.8 101 73.3
Glyma.20G058100 Glycine max HOM05D007263 ORTHO05D009187 3.3e-36 155.6 101 72.3
QL01p020523 Quercus lobata HOM05D007263 ORTHO05D009187 4.3e-36 155.2 101 74.3
THA.LOC104816966 Tarenaya hassleriana HOM05D007263 ORTHO05D009187 4.3e-36 155.2 129 62.8
PSO384G0367 Papaver somniferum HOM05D007263 ORTHO05D009187 5.6e-36 154.8 162 57.4
Phvul.L004437 Phaseolus vulgaris HOM05D007263 ORTHO05D009187 7.3e-36 154.5 99 74.7
Psat5g112360 Pisum sativum HOM05D007263 ORTHO05D009187 9.6e-36 154.1 172 49.4
Manes.09G111800 Manihot esculenta HOM05D007263 ORTHO05D009187 1.2e-35 153.7 152 54.6
GSVIVG01037444001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.6e-35 153.3 161 54.7
CiPaw.13G127300 Carya illinoinensis HOM05D007263 ORTHO05D009187 2.1e-35 152.9 101 72.3
Lj6g0015831 Lotus japonicus HOM05D007263 ORTHO05D009187 2.1e-35 152.9 165 50.9
Nn6g32384 Nelumbo nucifera HOM05D007263 ORTHO05D009187 2.8e-35 152.5 160 53.1
VMungo0540G1942 Vigna mungo HOM05D007263 ORTHO05D009187 2.8e-35 152.5 101 72.3
Eucgr.J00617 Eucalyptus grandis HOM05D007263 ORTHO05D009187 3.6e-35 152.1 101 71.3
Medtr3g079520 Medicago truncatula HOM05D007263 ORTHO05D009187 4.7e-35 151.8 161 52.8
Medtr3g479600 Medicago truncatula HOM05D007263 ORTHO05D009187 4.7e-35 151.8 161 52.8
Prupe.6G154100 Prunus persica HOM05D007263 ORTHO05D009187 8.1e-35 151.0 99 72.7
MBI19_g09308_MAGBIO Magnolia biondii HOM05D007263 ORTHO05D009187 1.1e-34 150.6 104 67.3
Thecc.09G263800 Theobroma cacao HOM05D007263 ORTHO05D009187 1.1e-34 150.6 120 62.5
TAR623G1137 Trochodendron aralioides HOM05D007263 ORTHO05D009187 1.1e-34 150.6 154 55.2
ATR0068G111 Amborella trichopoda HOM05D007263 ORTHO05D009187 1.4e-34 150.2 156 53.2
Ciclev10016536m.g Citrus clementina HOM05D007263 ORTHO05D009187 3.1e-34 149.1 102 71.6
CANSAT54G3001 Cannabis sativa HOM05D007263 ORTHO05D009187 4.0e-34 148.7 101 68.3
Actinidia06355 Actinidia chinensis HOM05D007263 ORTHO05D009187 5.2e-34 148.3 162 53.1
PGR119G0910 Punica granatum HOM05D007263 ORTHO05D009187 5.2e-34 148.3 101 71.3
Potri.009G156700 Populus trichocarpa HOM05D007263 ORTHO05D009187 8.9e-34 147.5 157 53.5
Sabra09G0122700 Salix brachista HOM05D007263 ORTHO05D009187 8.9e-34 147.5 103 69.9
Sc06g0006180 Simmondsia chinensis HOM05D007263 ORTHO05D009187 8.9e-34 147.5 98 66.3
Gohir.A05G075400 Gossypium hirsutum HOM05D007263 ORTHO05D009187 2.6e-33 146.0 101 69.3
Gohir.D05G078200 Gossypium hirsutum HOM05D007263 ORTHO05D009187 2.6e-33 146.0 101 69.3
Gorai.009G079700 Gossypium raimondii HOM05D007263 ORTHO05D009187 2.6e-33 146.0 101 69.3
Oeu032066.1 Olea europaea HOM05D007263 ORTHO05D009187 5.8e-33 144.8 101 71.3
DCAR_028386 Daucus carota HOM05D007263 ORTHO05D009187 9.9e-33 144.1 168 51.8
HanXRQChr03g0085111 Helianthus annuus HOM05D007263 ORTHO05D009187 9.9e-33 144.1 150 56.7
SalBow3G2238 Salvia bowleyana HOM05D007263 ORTHO05D009187 9.9e-33 144.1 102 67.6
Migut.N02412 Erythranthe guttata HOM05D007263 ORTHO05D009187 1.3e-32 143.7 111 63.1
Rhsim01G0197200 Rhododendron simsii HOM05D007263 ORTHO05D009187 1.7e-32 143.3 101 69.3
Lalb_Chr14g0363361 Lupinus albus HOM05D007263 ORTHO05D009187 3.8e-32 142.1 93 72.0
COL.COLO4_25292 Corchorus olitorius HOM05D007263 ORTHO05D009187 4.9e-32 141.7 101 67.3
CDE07G0519 Ceratophyllum demersum HOM05D007263 ORTHO05D009187 6.4e-32 141.4 98 66.3
Duzib168G0238 Durio zibethinus HOM05D007263 ORTHO05D009187 1.1e-31 140.6 101 69.3
CSS0014161 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 1.4e-31 140.2 101 66.3
BcaC07g41154 Brassica carinata HOM05D007263 ORTHO05D009187 1.9e-31 139.8 99 68.7
BolC8t51703H Brassica oleracea HOM05D007263 ORTHO05D009187 1.9e-31 139.8 99 68.7
A09p58160 Brassica napus HOM05D007263 ORTHO05D009187 3.2e-31 139.0 99 68.7
BraA09t41205Z Brassica rapa HOM05D007263 ORTHO05D009187 3.2e-31 139.0 99 68.7
TPR.G9589 Trifolium pratense HOM05D007263 ORTHO05D009187 3.2e-31 139.0 92 68.5
ECA240G3643 Erigeron canadensis HOM05D000684 ORTHO05D000688 5.4e-31 138.3 99 68.7
Sp4g00690 Schrenkiella parvula HOM05D007263 ORTHO05D009187 9.3e-31 137.5 99 67.7
AL4G10720 Arabidopsis lyrata HOM05D007263 ORTHO05D009187 1.6e-30 136.7 99 66.7
Carub.0004s0057 Capsella rubella HOM05D007263 ORTHO05D009187 1.6e-30 136.7 99 66.7
Thhalv10000320m.g Eutrema salsugineum HOM05D007263 ORTHO05D009187 1.6e-30 136.7 175 47.4
CARHR112460 Cardamine hirsuta HOM05D007263 ORTHO05D009187 2.7e-30 136.0 99 66.7
Aa31LG7G14990 Aethionema arabicum HOM05D007263 ORTHO05D009187 3.5e-30 135.6 103 61.2
CSS0024406 Camellia sinensis var. sinensis HOM05D007263 ORTHO05D009187 3.5e-30 135.6 163 49.1
AT2G21530 Arabidopsis thaliana HOM05D007263 ORTHO05D009187 4.6e-30 135.2 99 66.7
SGA_v2.0_scaffold16G07576 Striga asiatica HOM05D007263 ORTHO05D009187 4.6e-30 135.2 104 63.5
SGA_v2.0_scaffold3G01630 Striga asiatica HOM05D007263 ORTHO05D009187 4.6e-30 135.2 104 63.5
MSTRG.17655 Avicennia marina HOM05D007263 ORTHO05D009187 6.0e-30 134.8 160 51.2
Hund18825 Selenicereus undatus HOM05D007263 ORTHO05D009187 6.0e-30 134.8 98 62.2
unitig_8.g2984 Utricularia gibba HOM05D007263 ORTHO05D009187 7.8e-30 134.4 102 63.7
EL10Ac7g16235 Beta vulgaris HOM05D007263 ORTHO05D009187 1.0e-29 134.0 99 63.6
Lsat_1_v5_gn_6_85860 Lactuca sativa HOM05D007263 ORTHO05D009187 1.3e-29 133.7 98 65.3
Zm00001eb163720 Zea mays HOM05D007263 ORTHO05D009187 3.9e-29 132.1 104 60.6
AUR62001600 Chenopodium quinoa HOM05D007263 ORTHO05D009187 5.1e-29 131.7 153 45.1
SGA_v2.0_scaffold29G12128 Striga asiatica HOM05D000563 ORTHO05D000536 6.6e-29 131.3 101 62.4
AUR62020179 Chenopodium quinoa HOM05D007263 ORTHO05D009187 8.7e-29 131.0 151 46.4
vmacro23061 Vaccinium macrocarpon HOM05D007263 ORTHO05D009187 1.1e-28 130.6 92 68.5
SMO271G0152 Selaginella moellendorffii HOM05D007263 ORTHO05D009187 1.9e-28 129.8 133 48.1
Cc01_g07450 Coffea canephora HOM05D007263 ORTHO05D009187 2.5e-28 129.4 99 58.6
Pp3c1_27160 Physcomitrium patens HOM05D007263 ORTHO05D009187 1.4e-26 123.6 101 56.4
CAN.G651.2 Capsicum annuum HOM05D007263 ORTHO05D009187 3.1e-26 122.5 98 59.2
Os11g0127800 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 4.0e-26 122.1 120 48.3
Pp3c2_15500 Physcomitrium patens HOM05D007263 ORTHO05D009187 1.2e-25 120.6 112 49.1
Solyc01g009080.4 Solanum lycopersicum HOM05D007263 ORTHO05D009187 1.5e-25 120.2 101 58.4
Sopen01g004570 Solanum pennellii HOM05D007263 ORTHO05D009187 1.5e-25 120.2 101 58.4
PGSC0003DMG400022700 Solanum tuberosum HOM05D007263 ORTHO05D009187 2.0e-25 119.8 101 58.4
Haze_23636 Corylus avellana HOM05D007263 ORTHO05D009187 2.4e-23 112.8 126 49.2
Nitab4.5_0000428g0130 Nicotiana tabacum HOM05D007263 ORTHO05D009187 6.7e-21 104.8 86 60.5
Mapoly0061s0077 Marchantia polymorpha HOM05D007263 ORTHO05D009187 1.1e-20 104.0 98 48.0
Cpa.g.c47634 Carica papaya HOM05D007263 ORTHO05D009187 1.3e-19 100.5 114 49.1
SEGI_12571 Sequoiadendron giganteum HOM05D007263 ORTHO05D009187 2.1e-19 99.8 79 58.2
Potri.009G156900 Populus trichocarpa HOM05D007263 ORTHO05D009187 3.6e-19 99.0 73 67.1
SGA_v2.0_scaffold8G04511 Striga asiatica HOM05D000563 ORTHO05D000536 4.8e-19 98.6 76 64.5
Nitab4.5_0002300g0100 Nicotiana tabacum HOM05D007263 ORTHO05D009187 4.5e-17 92.0 100 50.0
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea HOM05D007263 ORTHO05D009187 9.9e-17 90.9 156 40.4
Peaxi162Scf00342g00119 Petunia axillaris HOM05D007263 ORTHO05D009187 1.7e-16 90.1 149 42.3
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea HOM05D007263 ORTHO05D009187 2.2e-16 89.7 120 45.0
Cpa.g.sc103.87 Carica papaya HOM05D007263 ORTHO05D009187 6.4e-16 88.2 107 45.8
MCO16G316 Micromonas commoda HOM05D007263 ORTHO05D009187 3.5e-14 82.4 139 36.7
Cre12.g534450 Chlamydomonas reinhardtii HOM05D007263 ORTHO05D009187 2.1e-11 73.2 113 37.2
Os12g0124000 Oryza sativa ssp. japonica HOM05D007263 ORTHO05D009187 1.1e-10 70.9 119 31.9
PRCOL_00003243 Prasinoderma coloniale HOM05D007263 ORTHO05D009187 1.3e-08 63.9 99 37.4
Sabra04G0132300 Salix brachista HOM05D000052 ORTHO05D001127 1.4e-07 60.5 58 51.7
AagrBONN_evm.TU.Sc2ySwM_117.94 Anthoceros agrestis HOM05D007263 ORTHO05D009187 3.5e-06 55.8 53 49.1


User provided reference genes

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