Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014581.2 Cucumis melo HOM05D007721 ORTHO05D009811 2.8e-42 174.9 89 100.0
Sed0010702 Sechium edule HOM05D007721 ORTHO05D009811 3.8e-31 137.9 83 80.7
Migut.D01985 Erythranthe guttata HOM05D007721 ORTHO05D009811 6.5e-23 110.5 71 73.2
Oeu013174.2 Olea europaea HOM05D007721 ORTHO05D009811 6.5e-23 110.5 74 74.3
CiPaw.14G116700 Carya illinoinensis HOM05D007721 ORTHO05D009811 9.4e-22 106.7 71 71.8
QL01p004762 Quercus lobata HOM05D007721 ORTHO05D009811 9.4e-22 106.7 70 72.9
SalBow6G6016 Salvia bowleyana HOM05D007721 ORTHO05D009811 1.2e-21 106.3 71 71.8
QL01p004062 Quercus lobata HOM05D007721 ORTHO05D009811 2.1e-21 105.5 70 71.4
SalBow6G6561 Salvia bowleyana HOM05D007721 ORTHO05D009811 2.1e-21 105.5 71 70.4
Eucgr.J00742 Eucalyptus grandis HOM05D007721 ORTHO05D009811 8.0e-21 103.6 91 62.6
Ciclev10017339m.g Citrus clementina HOM05D007721 ORTHO05D009811 1.8e-20 102.4 71 74.6
Prupe.1G174200 Prunus persica HOM05D007721 ORTHO05D009811 1.8e-20 102.4 71 73.2
GSVIVG01031536001 Vitis vinifera HOM05D007721 ORTHO05D009811 8.8e-20 100.1 71 71.8
arahy.Tifrunner.gnm1.ann1.MV9AMF Arachis hypogaea HOM05D007721 ORTHO05D009811 1.2e-19 99.8 71 64.8
arahy.Tifrunner.gnm1.ann1.S4R3T1 Arachis hypogaea HOM05D007721 ORTHO05D009811 1.2e-19 99.8 71 64.8
unitig_746.g26884 Utricularia gibba HOM05D007721 ORTHO05D009811 1.2e-19 99.8 71 67.6
MD04G1023900 Malus domestica HOM05D007721 ORTHO05D009811 2.0e-19 99.0 71 71.8
Zm00001eb141680 Zea mays HOM05D007721 ORTHO05D009811 2.0e-19 99.0 71 63.4
Actinidia06926 Actinidia chinensis HOM05D007721 ORTHO05D009811 3.4e-19 98.2 71 64.8
FAN07G1724 Fragaria x ananassa HOM05D007721 ORTHO05D009811 3.4e-19 98.2 71 69.0
Lj3g0008015 Lotus japonicus HOM05D007721 ORTHO05D009811 3.4e-19 98.2 71 67.6
Peaxi162Scf00069g00105 Petunia axillaris HOM05D007721 ORTHO05D009811 3.4e-19 98.2 74 64.9
Solyc10g079920.2 Solanum lycopersicum HOM05D007721 ORTHO05D009811 3.4e-19 98.2 74 63.5
Sopen10g030540 Solanum pennellii HOM05D007721 ORTHO05D009811 3.4e-19 98.2 74 63.5
Hma1.2p1_0591F.1_g185200 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 4.4e-19 97.8 71 69.0
Manes.06G162100 Manihot esculenta HOM05D007721 ORTHO05D009811 4.4e-19 97.8 57 84.2
RcHm_v2.0_Chr4g0411561 Rosa chinensis HOM05D007721 ORTHO05D009811 4.4e-19 97.8 71 67.6
ECA236G4835 Erigeron canadensis HOM05D007721 ORTHO05D009811 5.7e-19 97.4 71 67.6
Nn7g36378 Nelumbo nucifera HOM05D007721 ORTHO05D009811 5.7e-19 97.4 71 70.4
Nitab4.5_0000677g0250 Nicotiana tabacum HOM05D007721 ORTHO05D009811 5.7e-19 97.4 73 63.0
FAN12G3598 Fragaria x ananassa HOM05D007721 ORTHO05D009811 7.5e-19 97.1 71 67.6
Hma1.2p1_0055F.1_g031440 Hydrangea macrophylla HOM05D007721 ORTHO05D009811 7.5e-19 97.1 71 67.6
Lalb_Chr07g0195541 Lupinus albus HOM05D007721 ORTHO05D009811 7.5e-19 97.1 88 58.0
FAN17G1673 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.3e-18 96.3 57 78.9
Os01g0939000 Oryza sativa ssp. japonica HOM05D007721 ORTHO05D009811 2.8e-18 95.1 71 64.8
CSS0018729 Camellia sinensis var. sinensis HOM05D007721 ORTHO05D009811 4.8e-18 94.4 71 66.2
Potri.009G050900 Populus trichocarpa HOM05D007721 ORTHO05D009811 4.8e-18 94.4 72 66.7
Thecc.09G239100 Theobroma cacao HOM05D007721 ORTHO05D009811 4.8e-18 94.4 71 69.0
Ah.06g193880 Amaranthus hybridus HOM05D007721 ORTHO05D009811 6.3e-18 94.0 71 69.0
Phvul.010G051900 Phaseolus vulgaris HOM05D007721 ORTHO05D009811 1.1e-17 93.2 71 63.4
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 1.4e-17 92.8 71 62.0
Gohir.A07G123300 Gossypium hirsutum HOM05D007721 ORTHO05D009811 1.8e-17 92.4 71 66.2
Nitab4.5_0000937g0060 Nicotiana tabacum HOM05D007721 ORTHO05D009811 2.4e-17 92.0 72 59.7
SEGI_08983 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.1e-17 91.7 71 64.8
SEGI_33053 Sequoiadendron giganteum HOM05D007721 ORTHO05D009811 3.1e-17 91.7 71 64.8
Cc01_g05050 Coffea canephora HOM05D007721 ORTHO05D009811 1.2e-16 89.7 89 58.4
CARHR200650 Cardamine hirsuta HOM05D007721 ORTHO05D009811 1.6e-16 89.4 71 64.8
Gohir.A05G070100 Gossypium hirsutum HOM05D007721 ORTHO05D009811 2.0e-16 89.0 71 64.8
Gorai.001G137300 Gossypium raimondii HOM05D007721 ORTHO05D009811 2.0e-16 89.0 71 63.4
Glyma.03G114000 Glycine max HOM05D007721 ORTHO05D009811 4.5e-16 87.8 71 60.6
Potri.012G127000 Populus trichocarpa HOM05D007721 ORTHO05D009811 7.7e-16 87.0 71 64.8
Dinv09950 Davidia involucrata HOM05D007721 ORTHO05D009811 1.0e-15 86.7 74 62.2
FAN22G0179 Fragaria x ananassa HOM05D007721 ORTHO05D009811 1.3e-15 86.3 78 60.3
Sp6g31180 Schrenkiella parvula HOM05D007721 ORTHO05D009811 1.3e-15 86.3 57 71.9
Lsat_1_v5_gn_8_56740 Lactuca sativa HOM05D007721 ORTHO05D009811 2.3e-15 85.5 71 63.4
A10p25380 Brassica napus HOM05D007721 ORTHO05D009811 6.6e-15 84.0 71 59.2
AagrBONN_evm.TU.Sc2ySwM_362.695 Anthoceros agrestis HOM05D007721 ORTHO05D009811 8.6e-15 83.6 71 60.6
Carub.0006s1099 Capsella rubella HOM05D007721 ORTHO05D009811 1.1e-14 83.2 71 60.6
Medtr7g102340 Medicago truncatula HOM05D007721 ORTHO05D009811 1.1e-14 83.2 71 57.7
Nitab4.5_0000562g0070 Nicotiana tabacum HOM05D007721 ORTHO05D009811 1.1e-14 83.2 69 58.0
BraA03t10703Z Brassica rapa HOM05D007721 ORTHO05D009811 2.5e-14 82.0 72 55.6
AL6G23280 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 5.5e-14 80.9 56 69.6
AL6G23350 Arabidopsis lyrata HOM05D007721 ORTHO05D009811 5.5e-14 80.9 56 69.6
A03p14040 Brassica napus HOM05D007721 ORTHO05D009811 5.5e-14 80.9 72 55.6
A02p19730 Brassica napus HOM05D007721 ORTHO05D009811 7.2e-14 80.5 72 55.6
C02p32350 Brassica napus HOM05D007721 ORTHO05D009811 7.2e-14 80.5 72 55.6
Mapoly0048s0062 Marchantia polymorpha HOM05D007721 ORTHO05D009811 1.2e-13 79.7 71 47.9
BcaC03g15544 Brassica carinata HOM05D007721 ORTHO05D009811 3.6e-13 78.2 72 54.2
BolC3t14068H Brassica oleracea HOM05D001160 ORTHO05D001092 4.7e-13 77.8 72 54.2
Sc08g0006390 Simmondsia chinensis HOM05D007721 ORTHO05D009811 4.7e-13 77.8 78 56.4
BcaB05g24889 Brassica carinata HOM05D007721 ORTHO05D009811 6.1e-13 77.4 72 54.2
Thhalv10015165m.g Eutrema salsugineum HOM05D007721 ORTHO05D009811 8.0e-13 77.0 72 58.3
BcaC01g06369 Brassica carinata HOM05D007721 ORTHO05D009811 1.8e-12 75.9 72 52.8
C03p16480 Brassica napus HOM05D007721 ORTHO05D009811 3.0e-12 75.1 72 52.8
BraA02t07009Z Brassica rapa HOM05D007721 ORTHO05D009811 3.0e-12 75.1 72 52.8
vmacro04125 Vaccinium macrocarpon HOM05D007721 ORTHO05D009811 8.9e-12 73.6 56 67.9
Carub.0008s1583 Capsella rubella HOM05D007721 ORTHO05D009811 6.3e-10 67.4 71 53.5
ClCG02G023070 Citrullus lanatus HOM05D007721 ORTHO05D009811 5.4e-09 64.3 60 63.3
TAR623G1786 Trochodendron aralioides HOM05D007721 ORTHO05D009811 1.2e-08 63.2 56 60.7
HanXRQChr04g0118971 Helianthus annuus HOM05D007721 ORTHO05D009811 9.5e-06 53.5 63 47.6


User provided reference genes

Program Settings