Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 8.9e-158 560.1 254 100.0
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.1e-150 536.6 254 94.5
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 5.8e-141 504.2 254 89.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.2e-116 422.5 255 77.3
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.5e-109 399.8 253 73.9
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 9.1e-94 347.4 247 64.4
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.5e-93 346.7 248 63.3
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 5.9e-93 344.7 245 65.3
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.7e-92 343.2 245 64.5
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 3.2e-91 339.0 245 61.6
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.9e-89 332.0 242 62.0
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 9.7e-88 327.4 248 57.3
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.3e-87 327.0 246 59.3
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.3e-87 327.0 254 59.8
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.7e-87 326.6 246 59.8
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.2e-87 326.2 239 61.1
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.2e-85 320.5 245 59.2
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.6e-85 320.1 248 60.1
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.0e-85 319.7 252 58.7
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 5.9e-85 318.2 245 57.1
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.0e-84 317.4 244 58.6
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 5.0e-84 315.1 251 59.0
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.5e-83 313.5 246 60.6
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.9e-83 313.2 274 55.5
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.5e-83 312.8 271 55.4
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 5.5e-83 311.6 238 59.2
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 9.4e-83 310.8 250 60.4
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 2.1e-82 309.7 245 60.8
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.7e-82 309.3 235 60.4
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 3.6e-82 308.9 250 60.0
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 4.7e-82 308.5 249 58.6
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 8.0e-82 307.8 242 56.2
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.4e-81 307.0 247 56.7
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.8e-81 306.6 248 56.5
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.8e-81 306.6 248 56.5
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 2.3e-81 306.2 243 57.6
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 8.8e-81 304.3 219 61.2
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.1e-80 303.9 247 59.9
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.0e-80 303.1 247 59.9
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.0e-80 303.1 244 58.2
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 7.5e-80 301.2 249 57.4
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.7e-79 300.1 253 58.1
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 2.2e-79 299.7 236 55.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 2.8e-79 299.3 248 54.8
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.8e-79 299.3 250 58.8
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.8e-79 298.5 247 59.5
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 6.3e-79 298.1 244 56.1
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 8.2e-79 297.7 250 58.0
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.1e-78 297.4 238 57.6
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 3.1e-78 295.8 265 58.1
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 7.0e-78 294.7 209 63.2
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.6e-77 293.5 232 59.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.6e-77 293.5 226 60.2
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 2.7e-77 292.7 236 55.9
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.0e-76 290.8 246 51.6
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 1.7e-76 290.0 208 62.5
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 5.0e-76 288.5 205 62.0
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 5.0e-76 288.5 234 53.4
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 6.5e-76 288.1 245 52.7
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.5e-75 287.0 222 57.2
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.5e-75 287.0 279 53.0
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 3.2e-75 285.8 236 53.4
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.2e-75 285.4 232 56.5
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 5.5e-75 285.0 249 54.2
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.8e-73 280.0 208 63.5
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 4.0e-73 278.9 267 47.9
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 4.0e-73 278.9 223 57.4
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 4.0e-73 278.9 240 55.4
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 5.2e-73 278.5 205 63.4
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 6.8e-73 278.1 247 54.7
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.5e-72 276.9 207 63.3
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 4.4e-72 275.4 248 54.0
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 5.7e-72 275.0 174 71.3
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.5e-72 274.6 174 71.3
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.5e-72 274.6 174 71.3
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 9.8e-72 274.2 203 60.1
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.3e-71 273.9 174 71.3
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 2.2e-71 273.1 223 58.3
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 3.7e-71 272.3 252 54.0
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 6.3e-71 271.6 261 53.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 6.3e-71 271.6 249 54.2
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 8.3e-71 271.2 247 53.0
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 8.3e-71 271.2 235 53.6
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.1e-70 270.8 223 57.8
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 2.4e-70 269.6 209 61.2
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 5.4e-70 268.5 247 53.4
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.2e-69 267.3 225 55.6
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.3e-68 263.8 229 53.7
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.3e-68 263.8 229 53.7
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.3e-68 263.8 211 59.7
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.7e-68 263.5 210 59.5
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 3.8e-68 262.3 209 58.9
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.5e-67 260.4 237 53.6
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 5.5e-67 258.5 228 53.5
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 8.0e-66 254.6 236 49.2
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.4e-65 253.8 234 48.7
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.4e-65 253.8 221 56.1
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.8e-65 253.4 206 56.3
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 8.8e-65 251.1 230 53.0
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 3.4e-64 249.2 232 55.2
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.7e-63 245.7 230 52.6
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 4.1e-62 242.3 205 57.6
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 4.1e-62 242.3 205 57.6
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 9.2e-62 241.1 163 66.9
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 9.2e-62 241.1 163 66.9
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 1.6e-61 240.4 193 58.0
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.5e-59 233.0 141 71.6
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 6.1e-58 228.4 126 77.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 8.0e-58 228.0 150 66.7
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 6.4e-55 218.4 138 68.8
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.0e-53 213.4 185 53.0
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 5.9e-53 211.8 176 56.8
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.6e-45 187.2 237 43.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 9.2e-38 161.4 121 57.0
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 3.6e-34 149.4 84 67.9
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.8e-33 147.1 119 52.9
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.3e-33 146.7 97 66.0
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.2e-32 144.4 119 52.9
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 6.0e-29 132.1 102 54.9
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.0e-16 90.5 159 35.2


User provided reference genes

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