Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014548.2 Cucumis melo HOM05D002956 ORTHO05D008031 2.9e-60 235.0 113 100.0
ClCG02G022710 Citrullus lanatus HOM05D002956 ORTHO05D008031 7.4e-56 220.3 109 95.4
Sed0014482 Sechium edule HOM05D002956 ORTHO05D008031 7.7e-53 210.3 109 89.0
Thhalv10002083m.g Eutrema salsugineum HOM05D002956 ORTHO05D008031 2.8e-47 191.8 105 82.9
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 6.3e-47 190.7 107 81.3
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 6.3e-47 190.7 107 81.3
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 8.2e-47 190.3 108 82.4
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 1.1e-46 189.9 106 80.2
COL.COLO4_07384 Corchorus olitorius HOM05D002956 ORTHO05D008031 1.1e-46 189.9 107 78.5
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 1.4e-46 189.5 108 79.6
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 2.4e-46 188.7 106 81.1
Dinv36148 Davidia involucrata HOM05D002956 ORTHO05D008031 4.1e-46 188.0 109 78.9
RcHm_v2.0_Chr5g0050251 Rosa chinensis HOM05D002956 ORTHO05D008031 5.3e-46 187.6 111 77.5
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 7.0e-46 187.2 105 81.0
Atru.chr3.3008 Acer truncatum HOM05D002956 ORTHO05D008031 1.2e-45 186.4 112 77.7
Cc01_g06320 Coffea canephora HOM05D002956 ORTHO05D008031 1.2e-45 186.4 108 76.9
Prupe.4G260400 Prunus persica HOM05D002956 ORTHO05D008031 2.0e-45 185.7 109 79.8
TAR369G0726 Trochodendron aralioides HOM05D002956 ORTHO05D008031 2.7e-45 185.3 109 78.9
Sopen11g024800 Solanum pennellii HOM05D002956 ORTHO05D008031 3.5e-45 184.9 110 76.4
Zm00001eb329010 Zea mays HOM05D002956 ORTHO05D008031 3.5e-45 184.9 108 74.1
PGSC0003DMG400031243 Solanum tuberosum HOM05D002956 ORTHO05D008031 4.5e-45 184.5 110 75.5
Cpa.g.sc34.183 Carica papaya HOM05D002956 ORTHO05D008031 5.9e-45 184.1 108 75.9
AT2G26810 Arabidopsis thaliana HOM05D002956 ORTHO05D008031 7.7e-45 183.7 106 79.2
Haze_23261 Corylus avellana HOM05D002956 ORTHO05D008031 7.7e-45 183.7 110 78.2
Medtr3g045720 Medicago truncatula HOM05D002956 ORTHO05D008031 7.7e-45 183.7 108 77.8
GSVIVG01037341001 Vitis vinifera HOM05D002956 ORTHO05D008031 1.0e-44 183.3 110 78.2
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 1.3e-44 183.0 108 75.9
Glyma.08G154800 Glycine max HOM05D002956 ORTHO05D008031 2.2e-44 182.2 106 77.4
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 2.9e-44 181.8 108 76.9
CiPaw.14G111000 Carya illinoinensis HOM05D002956 ORTHO05D008031 2.9e-44 181.8 109 76.1
DCAR_006894 Daucus carota HOM05D002956 ORTHO05D008031 2.9e-44 181.8 108 76.9
Phvul.005G020600 Phaseolus vulgaris HOM05D002956 ORTHO05D008031 2.9e-44 181.8 108 75.9
Carub.0004s0727 Capsella rubella HOM05D002956 ORTHO05D008031 3.8e-44 181.4 106 79.2
Eucgr.J00675 Eucalyptus grandis HOM05D002956 ORTHO05D008031 3.8e-44 181.4 108 76.9
Sc06g0004740 Simmondsia chinensis HOM05D002956 ORTHO05D008031 3.8e-44 181.4 106 77.4
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 5.0e-44 181.0 109 74.3
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 6.5e-44 180.6 101 80.2
Aqoxy2G00442 Aquilegia oxysepala HOM05D002956 ORTHO05D008031 8.5e-44 180.3 106 75.5
arahy.Tifrunner.gnm1.ann1.XLU01S Arachis hypogaea HOM05D002956 ORTHO05D008031 8.5e-44 180.3 106 73.6
AUR62000217 Chenopodium quinoa HOM05D002956 ORTHO05D008031 8.5e-44 180.3 110 75.5
PSO339G2954 Papaver somniferum HOM05D002956 ORTHO05D008031 8.5e-44 180.3 108 72.2
Gohir.D07G125600 Gossypium hirsutum HOM05D002956 ORTHO05D008031 1.1e-43 179.9 109 74.3
Gorai.001G135400 Gossypium raimondii HOM05D002956 ORTHO05D008031 1.1e-43 179.9 109 74.3
Potri.009G068400 Populus trichocarpa HOM05D002956 ORTHO05D008031 1.1e-43 179.9 108 75.9
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 1.5e-43 179.5 101 79.2
TPR.G11875 Trifolium pratense HOM05D002757 ORTHO05D008031 1.9e-43 179.1 106 75.5
Migut.N02382 Erythranthe guttata HOM05D002956 ORTHO05D008031 3.2e-43 178.3 111 76.6
Lj6g0022582 Lotus japonicus HOM05D002956 ORTHO05D008031 3.2e-43 178.3 108 72.2
Thecc.09G246000 Theobroma cacao HOM05D002956 ORTHO05D008031 3.2e-43 178.3 101 76.2
Actinidia06980 Actinidia chinensis HOM05D002956 ORTHO05D008031 7.2e-43 177.2 106 75.5
CSS0006448 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D008031 7.2e-43 177.2 103 77.7
Lalb_Chr15g0078511 Lupinus albus HOM05D002956 ORTHO05D008031 7.2e-43 177.2 100 79.0
Nn7g36838 Nelumbo nucifera HOM05D002956 ORTHO05D008031 7.2e-43 177.2 104 74.0
Ca_25980_v3 Cicer arietinum L. HOM05D002956 ORTHO05D008031 9.4e-43 176.8 104 76.9
Sabra09G0051500 Salix brachista HOM05D002956 ORTHO05D008031 1.2e-42 176.4 108 72.2
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 1.6e-42 176.0 110 76.4
Psat5g191880 Pisum sativum HOM05D002956 ORTHO05D008031 1.6e-42 176.0 104 76.0
ATR0307G044 Amborella trichopoda HOM05D002956 ORTHO05D008031 4.7e-42 174.5 106 76.4
Ciclev10018203m.g Citrus clementina HOM05D002956 ORTHO05D008031 4.7e-42 174.5 110 73.6
MBI19_g19211_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D008031 6.1e-42 174.1 112 72.3
Hund07424 Selenicereus undatus HOM05D002956 ORTHO05D008031 6.1e-42 174.1 108 74.1
CANSAT54G1478 Cannabis sativa HOM05D002956 ORTHO05D008031 1.0e-41 173.3 114 72.8
TWI31G0384 Tripterygium wilfordii HOM05D002956 ORTHO05D008031 1.4e-41 172.9 110 72.7
CDE04G0360 Ceratophyllum demersum HOM05D002956 ORTHO05D008031 1.8e-41 172.6 107 73.8
Duzib150G0193 Durio zibethinus HOM05D002956 ORTHO05D008031 6.8e-41 170.6 109 72.5
FAN16G1792 Fragaria x ananassa HOM05D002956 ORTHO05D008031 8.8e-41 170.2 110 72.7
HPP92_001025 Vanilla planifolia HOM05D002956 ORTHO05D008031 1.2e-40 169.9 109 71.6
FAN11G2127 Fragaria x ananassa HOM05D002956 ORTHO05D008031 1.5e-40 169.5 107 75.7
SGA_v2.0_scaffold26G11398 Striga asiatica HOM05D002956 ORTHO05D008031 1.5e-40 169.5 123 65.9
HanXRQChr12g0380421 Helianthus annuus HOM05D002956 ORTHO05D008031 2.0e-40 169.1 106 71.7
MSTRG.12436 Avicennia marina HOM05D002956 ORTHO05D008031 3.4e-40 168.3 105 74.3
MD00G1134600 Malus domestica HOM05D002956 ORTHO05D008031 3.4e-40 168.3 99 77.8
ECA233G6038 Erigeron canadensis HOM05D002956 ORTHO05D008031 1.7e-39 166.0 104 74.0
Oeu061696.1 Olea europaea HOM05D002956 ORTHO05D008031 4.8e-39 164.5 140 58.6
QL01p016670 Quercus lobata HOM05D002956 ORTHO05D008031 3.1e-38 161.8 99 74.7
PGR119G0612 Punica granatum HOM05D002956 ORTHO05D008031 9.1e-38 160.2 134 59.0
VMungo1080G1429 Vigna mungo HOM05D002956 ORTHO05D008031 5.9e-37 157.5 107 68.2
Os07g0641600 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D008031 1.0e-36 156.8 100 70.0
SEGI_15484 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.3e-36 156.4 110 62.7
EL10Ac4g10091 Beta vulgaris HOM05D002956 ORTHO05D008031 2.2e-36 155.6 109 67.0
arahy.Tifrunner.gnm1.ann1.1Z9FJQ Arachis hypogaea HOM05D002956 ORTHO05D008031 5.0e-36 154.5 106 66.0
SEGI_28475 Sequoiadendron giganteum HOM05D002956 ORTHO05D008031 1.9e-35 152.5 108 62.0
Psat4g060320 Pisum sativum HOM05D002956 ORTHO05D008031 1.6e-34 149.4 94 72.3
PSO384G3941 Papaver somniferum HOM05D002956 ORTHO05D008031 2.3e-33 145.6 108 62.0
AUR62006562 Chenopodium quinoa HOM05D002956 ORTHO05D008031 2.4e-30 135.6 88 75.0
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 5.4e-30 134.4 104 56.7
AagrBONN_evm.TU.Sc2ySwM_228.3973 Anthoceros agrestis HOM05D002956 ORTHO05D008031 3.5e-29 131.7 99 57.6
Rhsim13G0206100 Rhododendron simsii HOM05D002956 ORTHO05D008031 3.5e-29 131.7 83 72.3
Nitab4.5_0007012g0050 Nicotiana tabacum HOM05D002956 ORTHO05D008031 1.7e-28 129.4 86 67.4
FAN21G3062 Fragaria x ananassa HOM05D002956 ORTHO05D008031 2.9e-28 128.6 85 71.8
Pp3c3_3430 Physcomitrium patens HOM05D002956 ORTHO05D008031 3.6e-26 121.7 96 55.2
vmacro04048 Vaccinium macrocarpon HOM05D002956 ORTHO05D008031 1.0e-25 120.2 91 64.8
Aa31LG5G8970 Aethionema arabicum HOM05D002956 ORTHO05D008031 6.8e-25 117.5 83 67.5
CBR_g39846 Chara braunii HOM05D002956 ORTHO05D008031 3.4e-24 115.2 104 50.0
Lsat_1_v5_gn_5_63100 Lactuca sativa HOM05D002956 ORTHO05D008031 2.0e-21 105.9 136 42.6
Nitab4.5_0004018g0060 Nicotiana tabacum HOM05D002956 ORTHO05D008031 3.5e-21 105.1 75 62.7
FAN25G3179 Fragaria x ananassa HOM05D002956 ORTHO05D008031 3.9e-20 101.7 56 76.8
Psat2g099480 Pisum sativum HOM05D002956 ORTHO05D008031 5.6e-19 97.8 104 50.0
Psat5g130120 Pisum sativum HOM05D001082 ORTHO05D001538 3.4e-16 88.6 94 51.1
Zm00001eb110260 Zea mays HOM05D002956 ORTHO05D008031 3.4e-16 88.6 110 44.5
Psat2g099560 Pisum sativum HOM05D001082 ORTHO05D001538 4.4e-16 88.2 94 51.1
Solyc11g065040.2 Solanum lycopersicum HOM05D002956 ORTHO05D008031 5.8e-16 87.8 49 75.5
Peaxi162Scf00004g04220 Petunia axillaris HOM05D002956 ORTHO05D008031 1.4e-14 83.2 49 69.4
FAN25G0087 Fragaria x ananassa HOM05D002956 ORTHO05D008031 5.4e-14 81.3 47 70.2
Ah.06g194770 Amaranthus hybridus HOM05D002956 ORTHO05D008031 1.7e-12 76.3 81 46.9
Psat4g143640 Pisum sativum HOM05D002956 ORTHO05D008031 1.5e-11 73.2 86 50.0
CAN.G468.2 Capsicum annuum HOM05D002956 ORTHO05D008031 1.9e-11 72.8 42 73.8
CAN.G1049.9 Capsicum annuum HOM05D002956 ORTHO05D008031 8.9e-09 63.9 37 70.3
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 1.7e-07 59.7 107 29.9
Lj2C795T0 Lonicera japonica HOM05D002956 ORTHO05D008031 7.1e-06 54.3 25 84.0
unitig_22.g6189 Utricularia gibba HOM05D002956 ORTHO05D008031 9.2e-06 53.9 109 32.1


User provided reference genes

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