Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014429.2 Cucumis melo HOM05D000733 ORTHO05D000644 1.0e-42 176.4 92 100.0
CsaV3_6G037670 Cucumis sativus L. HOM05D000733 ORTHO05D000644 4.0e-23 111.3 96 66.7
ClCG09G011270 Citrullus lanatus HOM05D000733 ORTHO05D000644 5.4e-20 100.9 90 58.9
MELO3C005927.2 Cucumis melo HOM05D000733 ORTHO05D000644 3.7e-13 78.2 92 47.8
CiPaw.01G083300 Carya illinoinensis HOM05D000733 ORTHO05D000644 3.1e-12 75.1 92 46.7
Cfa003731 Carpinus fangiana HOM05D000733 ORTHO05D000644 1.6e-11 72.8 92 44.6
Haze_15738 Corylus avellana HOM05D000733 ORTHO05D000644 4.5e-11 71.2 92 43.5
TAR375G0206 Trochodendron aralioides HOM05D000733 ORTHO05D000644 5.9e-11 70.9 92 42.4
Lalb_Chr15g0076561 Lupinus albus HOM05D000733 ORTHO05D000644 1.0e-10 70.1 93 43.0
GSVIVG01027444001 Vitis vinifera HOM05D000733 ORTHO05D000644 1.0e-10 70.1 92 46.7
DCAR_022306 Daucus carota HOM05D000733 ORTHO05D000644 1.7e-10 69.3 94 44.7
Lsat_1_v5_gn_7_67421 Lactuca sativa HOM05D000733 ORTHO05D000644 3.8e-10 68.2 92 42.4
DCAR_022307 Daucus carota HOM05D000733 ORTHO05D000644 6.6e-10 67.4 93 41.9
TAR629G1326 Trochodendron aralioides HOM05D000733 ORTHO05D000644 1.1e-09 66.6 92 43.5
MD07G1160200 Malus domestica HOM05D000733 ORTHO05D000644 1.5e-09 66.2 92 41.3
Aqoxy5G04351 Aquilegia oxysepala HOM05D000733 ORTHO05D000644 2.5e-09 65.5 91 44.0
Nn1g00451 Nelumbo nucifera HOM05D000733 ORTHO05D000644 2.5e-09 65.5 92 40.2
Psat5g200280 Pisum sativum HOM05D000733 ORTHO05D000644 2.5e-09 65.5 92 40.2
VMungo1309G0551 Vigna mungo HOM05D000733 ORTHO05D000644 2.5e-09 65.5 92 40.2
VMungo0331G1334 Vigna mungo HOM05D000733 ORTHO05D000644 3.3e-09 65.1 92 40.2
Lj1g0007838 Lotus japonicus HOM05D000733 ORTHO05D000644 4.3e-09 64.7 92 41.3
Nn3g18791 Nelumbo nucifera HOM05D000733 ORTHO05D000644 4.3e-09 64.7 92 43.5
TAR374G0623 Trochodendron aralioides HOM05D003051 ORTHO05D003932 4.3e-09 64.7 92 41.3
QL08p047342 Quercus lobata HOM05D000733 ORTHO05D000644 5.6e-09 64.3 92 40.2
arahy.Tifrunner.gnm1.ann1.PEG0RN Arachis hypogaea HOM05D001073 ORTHO05D002392 7.3e-09 63.9 92 40.2
CiPaw.02G045000 Carya illinoinensis HOM05D000733 ORTHO05D000644 7.3e-09 63.9 92 41.3
Ca_09550_v3 Cicer arietinum L. HOM05D000733 ORTHO05D000644 7.3e-09 63.9 92 40.2
Phvul.010G119800 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 1.6e-08 62.8 92 42.4
CANSAT56G1378 Cannabis sativa HOM05D000733 ORTHO05D000644 2.1e-08 62.4 93 41.9
Glyma.16G017900 Glycine max HOM05D000733 ORTHO05D000644 2.1e-08 62.4 92 38.0
Phvul.009G258400 Phaseolus vulgaris HOM05D000733 ORTHO05D000644 2.1e-08 62.4 92 38.0
MSTRG.28284 Avicennia marina HOM05D000733 ORTHO05D000644 2.8e-08 62.0 92 41.3
Dinv34260 Davidia involucrata HOM05D001057 ORTHO05D003212 2.8e-08 62.0 96 41.7
Hma1.2p1_2492F.1_g323250 Hydrangea macrophylla HOM05D000733 ORTHO05D000644 2.8e-08 62.0 93 43.0
Prupe.2G198600 Prunus persica HOM05D000733 ORTHO05D000644 2.8e-08 62.0 92 40.2
FvH4_7g17770 Fragaria vesca HOM05D000733 ORTHO05D000644 3.6e-08 61.6 93 38.7
FAN06G0579 Fragaria x ananassa HOM05D000733 ORTHO05D000644 3.6e-08 61.6 93 38.7
FAN06G4789 Fragaria x ananassa HOM05D000733 ORTHO05D000644 3.6e-08 61.6 93 38.7
Glyma.19G260500 Glycine max HOM05D000733 ORTHO05D000644 3.6e-08 61.6 92 37.0
Medtr7g118270 Medicago truncatula HOM05D000733 ORTHO05D000644 3.6e-08 61.6 92 38.0
TWI23G0072 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 3.6e-08 61.6 92 38.0
Lj3g0019504 Lotus japonicus HOM05D000733 ORTHO05D000644 4.7e-08 61.2 92 38.0
TPR.G4748 Trifolium pratense HOM05D000733 ORTHO05D000644 4.7e-08 61.2 92 39.1
TWI14G0451 Tripterygium wilfordii HOM05D000733 ORTHO05D000644 6.1e-08 60.8 92 37.0
unitig_22.g6821 Utricularia gibba HOM05D000733 ORTHO05D000644 6.1e-08 60.8 92 40.2
FAN03G1036 Fragaria x ananassa HOM05D000733 ORTHO05D000644 1.0e-07 60.1 93 38.7
Gohir.A12G116900 Gossypium hirsutum HOM05D000733 ORTHO05D000644 1.4e-07 59.7 92 39.1
Peaxi162Scf00313g00026 Petunia axillaris HOM05D000733 ORTHO05D000644 1.4e-07 59.7 92 38.0
Atru.chr5.773 Acer truncatum HOM05D000733 ORTHO05D000644 1.8e-07 59.3 92 39.1
Oeu026365.1 Olea europaea HOM05D000733 ORTHO05D000644 1.8e-07 59.3 92 40.2
RcHm_v2.0_Chr1g0361161 Rosa chinensis HOM05D000733 ORTHO05D000644 1.8e-07 59.3 93 38.7
FAN10G0823 Fragaria x ananassa HOM05D000733 ORTHO05D000644 2.3e-07 58.9 93 37.6
FAN10G3093 Fragaria x ananassa HOM05D000733 ORTHO05D000644 2.3e-07 58.9 93 37.6
Hma1.2p1_0074F.1_g038780 Hydrangea macrophylla HOM05D000733 ORTHO05D000644 3.0e-07 58.5 94 38.3
MBI12_g14505_MAGBIO Magnolia biondii HOM05D000733 ORTHO05D000644 4.0e-07 58.2 92 37.0
PSO478G3050 Papaver somniferum HOM05D000733 ORTHO05D000644 4.0e-07 58.2 93 43.0
PSO782G0836 Papaver somniferum HOM05D000733 ORTHO05D000644 4.0e-07 58.2 93 43.0
Glyma.07G049300 Glycine max HOM05D000733 ORTHO05D000644 5.2e-07 57.8 92 35.9
Gohir.D12G120460 Gossypium hirsutum HOM05D000733 ORTHO05D000644 5.2e-07 57.8 92 38.0
Gorai.008G131300 Gossypium raimondii HOM05D000733 ORTHO05D000644 5.2e-07 57.8 92 38.0
Lalb_Chr04g0254141 Lupinus albus HOM05D000733 ORTHO05D000644 5.2e-07 57.8 92 38.0
TPR.G19831 Trifolium pratense HOM05D000733 ORTHO05D000644 5.2e-07 57.8 92 40.2
Ca_26488_v3 Cicer arietinum L. HOM05D000733 ORTHO05D000644 6.8e-07 57.4 92 40.2
Duzib138G0210 Durio zibethinus HOM05D000733 ORTHO05D000644 6.8e-07 57.4 92 37.0
Glyma.03G261400 Glycine max HOM05D000733 ORTHO05D000644 6.8e-07 57.4 89 37.1
Gohir.A11G101200 Gossypium hirsutum HOM05D000733 ORTHO05D000644 6.8e-07 57.4 92 39.1
Sc23g0001790 Simmondsia chinensis HOM05D000733 ORTHO05D000644 8.9e-07 57.0 93 35.5
Oeu007919.2 Olea europaea HOM05D000733 ORTHO05D000644 1.5e-06 56.2 88 40.9
PGR004G1369 Punica granatum HOM05D000733 ORTHO05D000644 1.5e-06 56.2 92 38.0
Gohir.D11G105800 Gossypium hirsutum HOM05D000733 ORTHO05D000644 2.0e-06 55.8 92 35.9
Sabra14G0078300 Salix brachista HOM05D000733 ORTHO05D000644 2.6e-06 55.5 92 38.0
Actinidia28082 Actinidia chinensis HOM05D001632 ORTHO05D001534 3.4e-06 55.1 93 35.5
COL.COLO4_23052 Corchorus olitorius HOM05D000733 ORTHO05D000644 3.4e-06 55.1 92 35.9
Gorai.007G113100 Gossypium raimondii HOM05D000733 ORTHO05D000644 3.4e-06 55.1 92 35.9
Psat4g164120 Pisum sativum HOM05D000733 ORTHO05D000644 3.4e-06 55.1 92 37.0
Sabra02G0134100 Salix brachista HOM05D000733 ORTHO05D000644 4.4e-06 54.7 92 37.0
CSS0000525 Camellia sinensis var. sinensis HOM05D000733 ORTHO05D000644 5.7e-06 54.3 94 37.2
Migut.N01520 Erythranthe guttata HOM05D000733 ORTHO05D000644 5.7e-06 54.3 92 35.9
Thecc.01G333000 Theobroma cacao HOM05D000733 ORTHO05D000644 5.7e-06 54.3 92 35.9


User provided reference genes

Program Settings