Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.9e-235 818.1 413 100.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 2.1e-180 636.0 447 75.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.5e-133 479.6 362 71.5
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.7e-126 456.8 381 62.7
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.5e-122 441.4 413 58.8
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.9e-121 438.7 380 61.3
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.1e-120 437.6 377 61.8
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.0e-118 431.0 368 62.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.3e-118 429.9 386 58.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 3.9e-118 429.1 381 61.7
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 6.6e-118 428.3 386 60.4
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.5e-117 427.2 369 62.1
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 2.5e-117 426.4 410 58.5
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 5.6e-117 425.2 370 60.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 9.5e-117 424.5 370 60.8
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.1e-116 423.3 390 58.5
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.1e-116 423.3 413 57.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.0e-115 421.0 420 56.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 4.0e-115 419.1 384 57.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 4.0e-115 419.1 384 57.0
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 5.2e-115 418.7 387 55.8
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 2.0e-114 416.8 380 58.9
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 4.4e-114 415.6 384 56.2
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.3e-113 414.1 405 54.8
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.9e-113 412.9 403 56.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 8.3e-113 411.4 400 54.5
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.1e-112 411.0 399 54.6
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.1e-112 411.0 403 54.3
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 4.1e-112 409.1 392 54.3
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 7.0e-112 408.3 391 55.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.2e-111 407.5 388 55.4
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.2e-111 407.5 403 54.1
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.2e-111 407.5 411 53.8
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.6e-111 407.1 370 57.6
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.6e-111 407.1 413 54.7
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.0e-111 406.8 379 56.5
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.7e-111 406.4 369 58.3
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.0e-111 405.2 415 54.5
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 7.8e-111 404.8 404 55.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 7.8e-111 404.8 368 58.4
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.0e-110 404.4 473 49.3
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.0e-110 404.4 400 55.0
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-110 403.7 445 53.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.0e-110 402.1 364 58.0
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.6e-110 401.7 403 54.6
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.1e-109 401.0 381 57.7
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.5e-109 399.8 436 51.1
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 2.8e-108 396.4 418 52.2
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.4e-107 394.0 436 51.1
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.3e-107 393.3 374 56.1
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.3e-107 393.3 371 56.9
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 3.1e-107 392.9 348 59.2
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 3.1e-107 392.9 374 56.1
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 5.2e-107 392.1 375 55.7
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 8.9e-107 391.3 379 55.9
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 8.9e-107 391.3 394 54.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.2e-106 391.0 368 56.0
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 4.4e-106 389.0 347 58.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 9.8e-106 387.9 362 56.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 9.8e-106 387.9 362 55.5
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.3e-105 387.5 362 55.8
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 4.1e-104 382.5 390 53.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 4.1e-104 382.5 374 54.5
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.6e-103 379.0 448 48.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.0e-103 378.6 376 56.1
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.3e-102 377.5 379 53.8
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.3e-102 377.5 405 52.1
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.7e-102 377.1 348 55.7
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.5e-101 373.2 387 51.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 3.3e-101 372.9 379 52.8
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 4.3e-101 372.5 393 52.4
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 7.3e-101 371.7 349 56.7
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.1e-99 367.9 357 54.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.3e-99 366.7 362 55.0
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 7.6e-98 361.7 380 51.3
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.2e-97 360.1 370 53.8
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 4.9e-97 359.0 364 54.7
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 7.1e-96 355.1 376 52.9
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 9.2e-96 354.8 394 50.0
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.3e-94 350.9 414 50.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 7.3e-93 345.1 418 45.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.1e-92 343.6 336 54.8
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.1e-92 343.6 513 41.1
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.8e-91 340.5 207 77.8
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 5.3e-83 312.4 381 45.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 5.3e-83 312.4 359 47.6
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 6.6e-78 295.4 348 46.0
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 4.6e-71 272.7 285 53.3
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.6e-71 272.7 354 46.0
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.9e-69 267.3 362 42.0
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.5e-66 256.1 140 90.0
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-65 253.1 306 45.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.1e-64 248.8 314 46.8
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 7.4e-53 212.2 284 45.1
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.4e-51 207.2 138 71.7
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.4e-50 203.4 121 82.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 2.5e-48 197.2 235 47.7
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 7.2e-48 195.7 235 46.8
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.2e-44 184.1 287 39.7
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.9e-40 171.0 249 39.4
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.2e-40 170.2 108 73.1
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 6.1e-39 166.0 133 63.9
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.3e-35 152.9 80 93.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.0e-25 122.1 178 42.1
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.4e-22 111.7 109 56.0
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 3.7e-20 103.6 172 41.9
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 2.2e-17 94.4 78 64.1
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 3.2e-16 90.5 99 47.5
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.8e-14 84.7 219 30.6
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.2e-14 83.2 53 69.8
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 8.8e-14 82.4 179 34.1
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.7e-12 78.2 62 62.9
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 2.4e-11 74.3 374 25.7


User provided reference genes

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