Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C014119.2 Cucumis melo HOM05D004805 ORTHO05D005756 7.7e-169 597.0 298 100.0
CsaV3_3G004240 Cucumis sativus L. HOM05D004805 ORTHO05D005756 5.2e-133 478.0 299 82.9
ClCG10G004450 Citrullus lanatus HOM05D004805 ORTHO05D005756 2.2e-123 446.0 297 78.8
Sed0016007 Sechium edule HOM05D004805 ORTHO05D005756 1.7e-115 419.9 296 74.0
Haze_09828 Corylus avellana HOM05D004805 ORTHO05D005756 2.6e-100 369.4 283 66.8
Cfa020188 Carpinus fangiana HOM05D004805 ORTHO05D005756 9.9e-100 367.5 283 65.7
LjContig00081g0004731 Lotus japonicus HOM05D004805 ORTHO05D005756 2.9e-99 365.9 282 65.6
Psat2g007280 Pisum sativum HOM05D004805 ORTHO05D005756 5.5e-98 361.7 286 64.0
Glyma.14G013400 Glycine max HOM05D004805 ORTHO05D005756 1.2e-97 360.5 290 62.4
arahy.Tifrunner.gnm1.ann1.KL44N8 Arachis hypogaea HOM05D004805 ORTHO05D005756 1.6e-97 360.1 281 64.1
Phvul.008G279200 Phaseolus vulgaris HOM05D004805 ORTHO05D005756 2.7e-97 359.4 284 63.0
Atru.chr9.1539 Acer truncatum HOM05D004805 ORTHO05D005756 6.0e-97 358.2 282 64.2
TPR.G8592 Trifolium pratense HOM05D004805 ORTHO05D005756 6.0e-97 358.2 282 64.2
Glyma.17G150300 Glycine max HOM05D004805 ORTHO05D005756 1.0e-96 357.5 283 62.9
Lj1g0004670 Lotus japonicus HOM05D004805 ORTHO05D005756 1.3e-96 357.1 283 63.3
Atru.chr13.2016 Acer truncatum HOM05D004805 ORTHO05D005756 2.3e-96 356.3 283 63.3
Duzib268G0855 Durio zibethinus HOM05D004805 ORTHO05D005756 2.3e-96 356.3 282 65.2
Lalb_Chr09g0322761 Lupinus albus HOM05D004805 ORTHO05D005756 3.0e-96 355.9 282 63.8
arahy.Tifrunner.gnm1.ann1.1A96RS Arachis hypogaea HOM05D004805 ORTHO05D005756 3.9e-96 355.5 281 64.1
Medtr5g095960 Medicago truncatula HOM05D004805 ORTHO05D005756 3.9e-96 355.5 282 62.8
Dinv10336 Davidia involucrata HOM05D004805 ORTHO05D005756 5.1e-96 355.1 288 61.8
TAR626G0989 Trochodendron aralioides HOM05D004805 ORTHO05D005756 6.7e-96 354.8 282 62.4
CiPaw.12G138400 Carya illinoinensis HOM05D004805 ORTHO05D005756 1.5e-95 353.6 282 64.5
FAN16G0962 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.5e-95 352.8 284 63.4
FAN25G0449 Fragaria x ananassa HOM05D004805 ORTHO05D005756 7.4e-95 351.3 283 63.6
Prupe.3G149500 Prunus persica HOM05D004805 ORTHO05D005756 7.4e-95 351.3 282 64.5
RcHm_v2.0_Chr7g0241681 Rosa chinensis HOM05D004805 ORTHO05D005756 9.6e-95 350.9 282 63.8
FvH4_3g11630 Fragaria vesca HOM05D004805 ORTHO05D005756 1.3e-94 350.5 282 63.5
Ca_06397_v3 Cicer arietinum L. HOM05D004805 ORTHO05D005756 2.1e-94 349.7 283 61.8
Actinidia30402 Actinidia chinensis HOM05D004805 ORTHO05D005756 3.7e-94 349.0 283 61.8
RcHm_v2.0_Chr5g0018651 Rosa chinensis HOM05D004805 ORTHO05D005756 8.1e-94 347.8 282 63.5
GSVIVG01014691001 Vitis vinifera HOM05D004805 ORTHO05D005756 1.8e-93 346.7 283 60.8
Nn1g07520 Nelumbo nucifera HOM05D004805 ORTHO05D005756 3.1e-93 345.9 281 61.9
CSS0002120 Camellia sinensis var. sinensis HOM05D004805 ORTHO05D005756 1.5e-92 343.6 285 60.7
Gorai.004G033700 Gossypium raimondii HOM05D004805 ORTHO05D005756 3.4e-92 342.4 283 61.5
MD05G1261800 Malus domestica HOM05D004805 ORTHO05D005756 4.5e-92 342.0 282 61.7
Ciclev10009329m.g Citrus clementina HOM05D004805 ORTHO05D005756 1.3e-91 340.5 282 61.3
Cc00_g18290 Coffea canephora HOM05D004805 ORTHO05D005756 2.2e-91 339.7 277 62.1
CANSAT11G2385 Cannabis sativa HOM05D004805 ORTHO05D005756 3.2e-90 335.9 282 61.7
Actinidia05003 Actinidia chinensis HOM05D004805 ORTHO05D005756 1.2e-89 334.0 283 59.7
Peaxi162Scf00139g01316 Petunia axillaris HOM05D004805 ORTHO05D005756 2.1e-89 333.2 281 60.1
PSO832G0973 Papaver somniferum HOM05D004805 ORTHO05D005756 2.7e-89 332.8 282 59.2
THA.LOC104811668 Tarenaya hassleriana HOM05D004805 ORTHO05D005756 3.5e-89 332.4 281 59.8
CAN.G623.13 Capsicum annuum HOM05D004805 ORTHO05D005756 7.9e-89 331.3 281 59.4
Lj1C890G11 Lonicera japonica HOM05D004805 ORTHO05D005756 7.9e-89 331.3 281 60.1
PGR142G3095 Punica granatum HOM05D004805 ORTHO05D005756 1.0e-88 330.9 282 60.6
Aqoxy4G03118 Aquilegia oxysepala HOM05D004805 ORTHO05D005756 1.8e-88 330.1 291 57.0
MSTRG.27026 Avicennia marina HOM05D004805 ORTHO05D005756 8.7e-88 327.8 286 59.1
PSO063G7513 Papaver somniferum HOM05D004805 ORTHO05D005756 8.7e-88 327.8 282 57.8
Aa31LG3G11710 Aethionema arabicum HOM05D004805 ORTHO05D005756 1.9e-87 326.6 280 59.3
Solyc07g065590.4 Solanum lycopersicum HOM05D004805 ORTHO05D005756 1.9e-87 326.6 288 58.7
Sopen07g033800 Solanum pennellii HOM05D004805 ORTHO05D005756 1.9e-87 326.6 283 58.0
Rhsim06G0229900 Rhododendron simsii HOM05D004805 ORTHO05D005756 2.5e-87 326.2 284 57.7
BcaB01g04372 Brassica carinata HOM05D004805 ORTHO05D005756 1.3e-86 323.9 280 58.2
SalBow4G0417 Salvia bowleyana HOM05D004805 ORTHO05D005756 1.6e-86 323.6 308 55.8
Eucgr.F03688 Eucalyptus grandis HOM05D004805 ORTHO05D005756 2.1e-86 323.2 282 60.6
DCAR_013232 Daucus carota HOM05D004805 ORTHO05D005756 3.7e-86 322.4 282 56.7
AL8G31370 Arabidopsis lyrata HOM05D004805 ORTHO05D005756 8.2e-86 321.2 280 59.6
Duzib213G0036 Durio zibethinus HOM05D004805 ORTHO05D005756 3.1e-85 319.3 283 59.0
SGA_v2.0_scaffold44G16806 Striga asiatica HOM05D001081 ORTHO05D003320 3.1e-85 319.3 282 58.9
CARHR269130 Cardamine hirsuta HOM05D004805 ORTHO05D005756 4.1e-85 318.9 280 58.6
HanXRQChr03g0074031 Helianthus annuus HOM05D004805 ORTHO05D005756 9.0e-85 317.8 277 58.8
Carub.0005s0950 Capsella rubella HOM05D004805 ORTHO05D005756 1.2e-84 317.4 279 58.8
Carub.0008s1616 Capsella rubella HOM05D004805 ORTHO05D005756 1.2e-84 317.4 280 57.9
AT5G55810 Arabidopsis thaliana HOM05D004805 ORTHO05D005756 1.5e-84 317.0 280 58.6
Carub.0005s0937 Capsella rubella HOM05D004805 ORTHO05D005756 1.5e-84 317.0 279 58.8
BcaC04g20199 Brassica carinata HOM05D004805 ORTHO05D005756 2.6e-84 316.2 280 57.5
PGSC0003DMG400022170 Solanum tuberosum HOM05D004805 ORTHO05D005756 2.6e-84 316.2 259 60.6
ECA234G3028 Erigeron canadensis HOM05D004805 ORTHO05D005756 3.4e-84 315.8 285 56.5
BcaC01g06393 Brassica carinata HOM05D004805 ORTHO05D005756 1.0e-83 314.3 280 56.8
Manes.03G141600 Manihot esculenta HOM05D004805 ORTHO05D005756 1.0e-83 314.3 282 56.7
Lsat_1_v5_gn_9_89740 Lactuca sativa HOM05D004805 ORTHO05D005756 1.3e-83 313.9 283 57.6
Gohir.D08G035700 Gossypium hirsutum HOM05D004805 ORTHO05D005756 6.5e-83 311.6 283 58.0
Potri.013G021900 Populus trichocarpa HOM05D004805 ORTHO05D005756 1.9e-82 310.1 282 56.0
BcaB08g35939 Brassica carinata HOM05D004805 ORTHO05D005756 2.5e-82 309.7 280 56.4
Sp6g17690 Schrenkiella parvula HOM05D004805 ORTHO05D005756 2.5e-82 309.7 280 56.4
Gohir.A08G025200 Gossypium hirsutum HOM05D004805 ORTHO05D005756 7.2e-82 308.1 281 57.7
TWI38G2348 Tripterygium wilfordii HOM05D004805 ORTHO05D005756 3.6e-81 305.8 239 63.2
Zm00001eb191530 Zea mays HOM05D004805 ORTHO05D005756 7.9e-81 304.7 280 57.9
QL08p004083 Quercus lobata HOM05D004805 ORTHO05D005756 1.8e-80 303.5 240 63.8
Potri.005G032300 Populus trichocarpa HOM05D004805 ORTHO05D005756 2.3e-80 303.1 282 55.3
Sabra05G0034900 Salix brachista HOM05D004805 ORTHO05D005756 2.3e-80 303.1 282 55.0
EL10Ac1g00341 Beta vulgaris HOM05D004805 ORTHO05D005756 2.5e-79 299.7 285 55.1
HPP92_025829 Vanilla planifolia HOM05D004805 ORTHO05D005756 5.7e-79 298.5 282 55.3
ATR0090G032 Amborella trichopoda HOM05D004805 ORTHO05D005756 4.8e-78 295.4 258 58.5
VMungo0647G2576 Vigna mungo HOM05D004805 ORTHO05D005756 6.9e-77 291.6 233 61.8
vmacro11591 Vaccinium macrocarpon HOM05D004805 ORTHO05D005756 2.6e-76 289.7 289 54.0
MD10G1240100 Malus domestica HOM05D004805 ORTHO05D005756 1.7e-75 287.0 239 60.7
Hma1.2p1_1402F.1_g281100 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 5.5e-74 282.0 254 56.7
Nitab4.5_0002736g0040 Nicotiana tabacum HOM05D004805 ORTHO05D005756 2.1e-73 280.0 230 60.0
Medtr3g007850 Medicago truncatula HOM05D004805 ORTHO05D005756 7.9e-73 278.1 234 59.8
Nitab4.5_0007415g0050 Nicotiana tabacum HOM05D004805 ORTHO05D005756 8.8e-72 274.6 231 59.7
C03p16250 Brassica napus HOM05D004805 ORTHO05D005756 1.1e-71 274.2 253 55.3
A03p13810 Brassica napus HOM05D004805 ORTHO05D005756 3.3e-71 272.7 253 54.5
C09p46750 Brassica napus HOM05D004805 ORTHO05D005756 3.3e-71 272.7 254 56.3
BolC9t57526H Brassica oleracea HOM05D004805 ORTHO05D005756 3.3e-71 272.7 254 56.3
A10p13030 Brassica napus HOM05D004805 ORTHO05D005756 4.3e-71 272.3 254 56.7
Sc16g0008090 Simmondsia chinensis HOM05D004805 ORTHO05D005756 4.3e-71 272.3 283 53.0
Thecc.07G013300 Theobroma cacao HOM05D004805 ORTHO05D005756 5.7e-71 271.9 215 63.7
Hund27237 Selenicereus undatus HOM05D004805 ORTHO05D005756 7.4e-71 271.6 311 49.8
AUR62022629 Chenopodium quinoa HOM05D004805 ORTHO05D005756 1.3e-70 270.8 280 53.9
BraA10t43397Z Brassica rapa HOM05D004805 ORTHO05D005756 2.2e-70 270.0 254 55.9
SGA_v2.0_scaffold192G40544 Striga asiatica HOM05D001081 ORTHO05D003320 9.4e-66 254.6 275 54.2
Pp3c3_17230 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.4e-64 250.8 284 45.1
Pp3c10_25720 Physcomitrium patens HOM05D004805 ORTHO05D005756 1.8e-64 250.4 282 45.7
Mapoly0011s0011 Marchantia polymorpha HOM05D004805 ORTHO05D005756 3.9e-64 249.2 280 49.3
Prupe.4G103800 Prunus persica HOM05D004805 ORTHO05D005756 3.9e-64 249.2 282 50.0
AagrBONN_evm.TU.Sc2ySwM_362.484 Anthoceros agrestis HOM05D004805 ORTHO05D005756 5.2e-64 248.8 292 44.9
Pp3c20_23380 Physcomitrium patens HOM05D004805 ORTHO05D005756 5.7e-63 245.4 282 46.1
AUR62004423 Chenopodium quinoa HOM05D004805 ORTHO05D005756 6.3e-62 241.9 204 58.8
CAN.G849.12 Capsicum annuum HOM05D004805 ORTHO05D005756 8.2e-62 241.5 221 56.1
Lsat_1_v5_gn_4_137701 Lactuca sativa HOM05D004805 ORTHO05D005756 4.5e-60 235.7 234 53.0
Pp3c13_13680 Physcomitrium patens HOM05D004805 ORTHO05D005756 7.7e-60 235.0 287 43.2
Hma1.2p1_1516F.1_g288260 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 2.5e-58 229.9 248 50.0
Lj3g0007860 Lotus japonicus HOM05D004805 ORTHO05D005756 1.2e-57 227.6 281 51.2
Migut.F01027 Erythranthe guttata HOM05D004805 ORTHO05D005756 3.6e-57 226.1 279 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3487 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.4e-56 224.2 238 47.1
CARHR269180 Cardamine hirsuta HOM05D004805 ORTHO05D005756 6.7e-56 221.9 202 56.4
FAN21G3052 Fragaria x ananassa HOM05D004805 ORTHO05D005756 2.0e-55 220.3 235 53.2
Glyma.19G097900 Glycine max HOM05D004805 ORTHO05D005756 1.4e-53 214.2 182 61.0
CBR_g34363 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-51 206.5 267 42.7
AagrBONN_evm.TU.Sc2ySwM_344.1047 Anthoceros agrestis HOM05D004805 ORTHO05D005756 8.5e-51 204.9 256 42.6
TAR624G1110 Trochodendron aralioides HOM05D004805 ORTHO05D005756 8.5e-51 204.9 234 49.1
Ah.05g180060 Amaranthus hybridus HOM05D004805 ORTHO05D005756 3.2e-50 203.0 200 54.5
Rhsim04G0012600 Rhododendron simsii HOM05D004805 ORTHO05D005756 1.8e-48 197.2 204 52.5
BraA03t10684Z Brassica rapa HOM05D004805 ORTHO05D005756 5.7e-47 192.2 253 46.6
COL.COLO4_09836 Corchorus olitorius HOM05D004805 ORTHO05D005756 6.3e-46 188.7 136 69.9
Os02g0814900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 4.1e-45 186.0 237 46.4
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.2e-44 184.5 210 49.0
Cpa.g.sc26.30 Carica papaya HOM05D004805 ORTHO05D005756 1.6e-44 184.1 108 79.6
SMO364G0361 Selaginella moellendorffii HOM05D004805 ORTHO05D005756 1.6e-44 184.1 253 39.1
AagrBONN_evm.TU.Sc2ySwM_344.1045 Anthoceros agrestis HOM05D004805 ORTHO05D005756 1.5e-42 177.6 232 41.8
BolC3t14047H Brassica oleracea HOM05D004805 ORTHO05D005756 1.0e-40 171.4 258 43.4
unitig_0.g252 Utricularia gibba HOM05D004805 ORTHO05D005756 3.4e-39 166.4 105 73.3
Thhalv10015421m.g Eutrema salsugineum HOM05D004805 ORTHO05D005756 1.1e-37 161.4 110 70.0
ECA240G4670 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.8e-37 160.6 106 68.9
Glyma.02G300600 Glycine max HOM05D004805 ORTHO05D005756 1.6e-36 157.5 105 73.3
PRCOL_00003123 Prasinoderma coloniale HOM05D004805 ORTHO05D005756 1.6e-36 157.5 298 33.9
PSO170G0902 Papaver somniferum HOM05D004805 ORTHO05D005756 1.8e-32 144.1 102 67.6
Os09g0347900 Oryza sativa ssp. japonica HOM05D004805 ORTHO05D005756 8.9e-32 141.7 144 49.3
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 2.6e-31 140.2 250 40.4
Hma1.2p1_0226F.1_g095340 Hydrangea macrophylla HOM05D004805 ORTHO05D005756 2.5e-26 123.6 196 39.3
SEGI_22417 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.2e-20 104.8 99 50.5
Cfa025186 Carpinus fangiana HOM05D004805 ORTHO05D005756 3.0e-19 100.1 211 30.3
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.1e-18 98.2 67 68.7
Oeu037059.1 Olea europaea HOM05D004805 ORTHO05D005756 8.3e-14 82.0 65 64.6
Cre14.g626950 Chlamydomonas reinhardtii HOM05D004805 ORTHO05D005756 3.2e-13 80.1 215 27.9
FAN24G2452 Fragaria x ananassa HOM05D004805 ORTHO05D005756 3.2e-13 80.1 55 65.5
CBR_g34381 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-11 74.7 81 44.4
SEGI_01519 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 3.0e-11 73.6 72 54.2
FAN16G1285 Fragaria x ananassa HOM05D004805 ORTHO05D005756 1.4e-08 64.7 44 68.2
SEGI_37983 Sequoiadendron giganteum HOM05D004805 ORTHO05D005756 1.4e-08 64.7 82 41.5


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