Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.5e-234 815.8 423 100.0
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 3.5e-191 671.8 423 84.4
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 9.9e-178 627.1 426 80.8
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 5.1e-150 535.0 432 70.6
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.3e-102 376.7 429 52.0
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.2e-100 370.2 430 51.2
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.3e-100 368.2 429 51.5
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 7.0e-99 365.2 426 51.2
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 3.5e-98 362.8 434 50.5
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 5.9e-98 362.1 430 50.9
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.3e-96 356.3 430 50.5
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 9.5e-96 354.8 429 50.8
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.6e-93 346.7 440 49.1
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 3.4e-93 346.3 449 49.2
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.3e-92 344.4 440 49.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.7e-92 344.0 442 48.6
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 2.2e-92 343.6 455 48.4
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 6.3e-92 342.0 429 48.5
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 3.1e-91 339.7 430 47.9
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 5.4e-91 339.0 488 44.9
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 2.0e-90 337.0 430 49.5
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.3e-89 334.3 431 48.7
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.8e-89 332.8 432 49.1
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 6.6e-89 332.0 430 47.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.1e-88 331.3 433 48.5
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 8.0e-87 325.1 426 46.7
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 8.9e-86 321.6 424 49.8
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.3e-84 317.8 429 47.1
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 1.7e-84 317.4 392 49.2
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 1.9e-83 313.9 413 47.9
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.2e-82 311.2 425 46.4
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 2.7e-82 310.1 431 45.2
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 2.7e-82 310.1 392 47.2
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 6.0e-82 308.9 429 45.7
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-81 308.1 419 45.6
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.0e-81 308.1 419 45.6
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 2.3e-81 307.0 426 45.8
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 5.0e-81 305.8 405 46.9
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 6.6e-81 305.4 427 46.4
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 5.6e-80 302.4 437 45.3
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.1e-79 300.4 430 46.3
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 2.1e-79 300.4 390 46.4
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.8e-79 300.1 440 45.5
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.6e-79 299.7 437 45.3
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.8e-78 297.4 400 45.2
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 3.1e-78 296.6 397 45.6
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.1e-78 296.6 428 45.1
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.0e-77 293.9 384 48.2
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 2.0e-77 293.9 412 44.2
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 7.5e-77 292.0 421 43.9
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 7.5e-77 292.0 392 44.6
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 3.7e-76 289.7 429 44.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 8.3e-76 288.5 426 45.3
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 2.4e-75 287.0 424 45.5
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 7.0e-75 285.4 426 43.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.2e-74 284.6 426 44.1
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.6e-74 284.3 421 43.2
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.6e-74 284.3 427 42.6
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.1e-74 283.9 397 43.8
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 3.5e-74 283.1 388 44.1
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.5e-74 283.1 391 43.7
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.5e-74 283.1 425 44.5
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 6.0e-74 282.3 391 44.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 1.9e-72 277.3 387 44.7
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 2.5e-72 276.9 426 41.8
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 1.6e-71 274.2 413 42.4
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 2.1e-71 273.9 440 44.1
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 1.5e-69 267.7 387 43.9
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.3e-68 264.6 411 45.7
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 5.1e-65 252.7 346 45.4
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.9e-64 250.8 419 42.0
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 3.3e-64 250.0 422 40.3
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 9.5e-64 248.4 388 39.9
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.6e-63 247.7 419 42.0
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 3.6e-63 246.5 435 38.2
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.1e-59 235.0 242 54.5
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 1.6e-58 231.1 346 46.0
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 2.1e-58 230.7 377 40.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 7.8e-58 228.8 426 36.2
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 6.6e-57 225.7 427 36.8
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.1e-56 224.9 499 37.9
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 1.1e-56 224.9 427 37.9
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.5e-56 224.6 283 48.1
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.9e-56 224.2 437 37.1
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.5e-56 223.8 436 35.6
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 5.6e-56 222.6 343 42.9
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 2.1e-55 220.7 429 38.7
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 1.8e-54 217.6 358 40.2
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.8e-54 217.6 433 40.6
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 2.4e-54 217.2 371 40.2
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.4e-54 217.2 415 37.8
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.0e-54 216.5 429 38.0
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 4.0e-54 216.5 425 36.9
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 5.3e-54 216.1 431 37.1
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 5.8e-53 212.6 374 38.2
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.1e-51 205.7 430 37.2
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 1.6e-50 204.5 437 35.5
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 1.6e-50 204.5 437 35.5
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.5e-48 198.0 280 46.4
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.9e-48 197.6 397 35.3
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 1.3e-47 194.9 431 36.0
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 2.1e-47 194.1 286 45.5
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 5.3e-46 189.5 351 39.9
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 4.9e-44 183.0 431 34.6
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.6e-42 177.9 441 34.5
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 6.0e-42 176.0 456 35.7
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.5e-40 171.4 275 41.8
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 7.4e-40 169.1 275 41.1
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 1.3e-39 168.3 390 31.5
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.4e-38 164.9 369 34.1
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.4e-38 164.9 369 34.1
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.4e-38 164.9 369 34.1
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 1.3e-36 158.3 467 31.5
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 2.7e-34 150.6 375 33.9
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 2.7e-34 150.6 375 33.9
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 6.9e-22 109.4 325 30.8
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 1.7e-20 104.8 67 71.6
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.7e-20 104.8 157 43.3
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 3.2e-19 100.5 387 27.6
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.2e-18 98.6 345 27.0
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 9.7e-16 89.0 86 58.1
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 2.2e-15 87.8 335 28.7
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 7.7e-13 79.3 71 56.3
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 1.0e-12 79.0 237 29.1
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.7e-10 70.9 49 65.3


User provided reference genes

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