Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 2.7e-129 465.3 233 100.0
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 7.0e-125 450.7 241 94.6
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 8.0e-121 437.2 241 91.3
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 1.5e-106 389.8 241 81.7
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 4.6e-84 315.1 233 67.4
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.2e-81 307.0 233 67.0
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.6e-81 306.6 241 62.7
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 4.0e-80 302.0 261 60.5
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.2e-79 300.4 232 66.4
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 1.2e-79 300.4 248 62.5
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 7.6e-79 297.7 249 61.4
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.3e-78 297.0 239 64.9
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 2.2e-78 296.2 222 65.8
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 2.2e-78 296.2 233 61.4
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 6.4e-78 294.7 212 68.4
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 1.9e-77 293.1 221 64.7
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 3.2e-77 292.4 235 63.8
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 5.4e-77 291.6 212 68.4
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 5.4e-77 291.6 212 67.0
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 9.2e-77 290.8 234 63.2
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.6e-76 290.0 212 66.0
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 1.6e-76 290.0 217 66.8
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.6e-76 290.0 212 68.9
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.1e-76 289.7 232 63.8
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.6e-76 288.5 233 60.9
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 6.0e-76 288.1 216 63.4
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 6.0e-76 288.1 233 62.2
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.0e-75 287.3 213 64.8
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.3e-75 287.0 208 68.3
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.3e-75 286.2 233 60.5
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 3.0e-75 285.8 232 60.8
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 3.0e-75 285.8 233 60.5
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 3.0e-75 285.8 233 60.9
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 3.0e-75 285.8 221 63.3
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.1e-74 283.9 236 63.6
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.1e-74 283.9 212 66.5
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 1.5e-74 283.5 240 60.0
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.5e-74 283.5 310 51.0
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.5e-74 282.7 233 60.5
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 3.3e-74 282.3 215 63.7
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 5.6e-74 281.6 211 64.9
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.6e-74 281.6 232 62.5
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 7.3e-74 281.2 233 59.7
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 1.6e-73 280.0 212 61.8
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.6e-73 280.0 219 64.4
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.6e-73 280.0 240 59.6
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 2.1e-73 279.6 233 60.5
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 2.8e-73 279.3 215 64.2
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.6e-73 278.9 234 59.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 4.7e-73 278.5 215 63.7
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 4.7e-73 278.5 221 64.3
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 4.7e-73 278.5 221 61.1
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 6.2e-73 278.1 224 61.6
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 8.1e-73 277.7 212 60.8
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.4e-72 276.9 217 64.5
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.8e-72 276.6 224 61.2
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 2.4e-72 276.2 213 60.6
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 3.1e-72 275.8 211 64.5
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 5.2e-72 275.0 214 62.6
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 2.6e-71 272.7 244 57.4
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 1.3e-70 270.4 210 62.4
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 3.8e-70 268.9 233 58.8
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 3.8e-70 268.9 210 61.9
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 8.4e-70 267.7 223 56.5
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 2.4e-69 266.2 211 60.2
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 5.4e-69 265.0 211 63.0
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 7.1e-69 264.6 212 59.4
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 3.5e-68 262.3 210 59.0
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 4.6e-68 261.9 225 57.8
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 6.0e-68 261.5 212 59.4
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.0e-67 260.8 212 59.4
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 3.0e-67 259.2 234 56.8
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 5.1e-67 258.5 220 59.1
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.9e-66 256.5 232 54.3
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 2.5e-66 256.1 211 61.1
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 2.5e-66 256.1 233 56.7
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 3.3e-66 255.8 211 60.2
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 5.6e-66 255.0 211 56.9
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 9.6e-66 254.2 211 61.1
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 9.6e-66 254.2 211 56.9
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.3e-65 253.8 214 57.9
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 4.8e-65 251.9 225 56.9
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 6.2e-65 251.5 211 56.9
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 8.1e-65 251.1 211 59.2
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 1.8e-64 250.0 216 58.8
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 1.8e-64 250.0 211 59.7
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 3.1e-64 249.2 216 58.8
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 3.1e-64 249.2 216 58.8
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 6.9e-64 248.1 221 53.4
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.2e-63 247.3 211 55.0
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 2.0e-63 246.5 211 59.2
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 2.6e-63 246.1 227 52.0
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 2.6e-63 246.1 211 54.5
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 5.8e-63 245.0 213 59.2
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 7.6e-63 244.6 231 57.1
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 4.2e-61 238.8 217 54.8
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.2e-60 237.3 216 55.1
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 7.9e-60 234.6 277 47.3
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.8e-59 233.4 207 56.5
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 2.5e-58 229.6 211 53.1
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 1.8e-56 223.4 157 69.4
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 2.2e-54 216.5 143 69.2
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.4e-53 213.0 212 52.4
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 2.5e-50 203.0 213 49.3
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 7.4e-50 201.4 143 68.5
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 6.2e-49 198.4 143 66.4
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 9.0e-48 194.5 142 65.5
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.8e-47 191.8 139 64.0
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.4e-40 169.9 211 46.0
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 5.1e-35 152.1 122 57.4
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 6.3e-33 145.2 115 59.1
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 9.7e-26 121.3 191 35.1
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.3e-14 84.3 224 32.1
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 5.0e-14 82.4 126 38.9
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 5.9e-07 58.9 191 29.3
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.9e-06 56.6 54 55.6


User provided reference genes

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