Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.7e-302 1041.2 529 100.0
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 4.9e-283 977.2 514 93.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 7.8e-257 890.2 495 91.1
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 9.9e-236 820.1 505 82.6
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 6.1e-177 624.8 493 65.1
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.0e-176 624.0 494 64.8
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.2e-169 600.5 495 61.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 5.4e-165 585.1 495 60.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 2.8e-161 572.8 507 57.4
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 5.2e-160 568.5 497 58.6
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.5e-159 567.0 495 59.2
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 8.3e-158 561.2 508 57.3
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 3.2e-157 559.3 510 58.0
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-156 557.0 510 58.0
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 5.0e-155 552.0 507 54.4
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 6.6e-155 551.6 497 59.4
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 3.3e-154 549.3 508 55.3
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 4.3e-154 548.9 498 56.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.5e-154 547.7 507 54.8
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-153 547.4 510 57.5
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-153 547.4 510 57.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.6e-153 547.0 509 57.4
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 4.7e-153 545.4 508 54.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 6.2e-153 545.0 507 56.8
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.4e-152 543.9 492 57.9
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.3e-152 543.1 507 54.6
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.5e-151 540.4 439 59.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.3e-150 537.3 495 56.2
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.4e-150 535.0 507 53.5
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.1e-149 534.3 509 55.2
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 9.2e-149 531.2 512 56.2
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.6e-148 528.9 420 60.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 4.6e-148 528.9 508 55.3
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 6.0e-148 528.5 502 55.2
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.3e-146 522.7 496 57.7
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 4.7e-145 518.8 511 55.4
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 6.2e-145 518.5 497 52.3
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.6e-143 513.1 498 54.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 9.9e-143 511.1 497 54.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.2e-142 510.0 494 53.8
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.4e-141 507.3 497 53.9
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 3.2e-141 506.1 493 52.1
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 4.1e-141 505.8 495 53.3
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 6.0e-140 501.9 495 52.1
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.7e-139 500.4 496 53.2
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 5.1e-139 498.8 504 53.4
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 6.6e-139 498.4 499 51.5
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.6e-139 498.4 496 52.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 8.7e-139 498.0 510 53.3
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 8.7e-139 498.0 496 52.4
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.5e-138 497.3 508 51.8
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.9e-138 496.9 496 55.2
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 3.3e-138 496.1 505 53.7
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.3e-138 495.7 505 52.7
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 7.3e-138 495.0 493 53.3
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 3.6e-137 492.7 513 52.8
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.6e-137 492.7 500 52.4
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-136 491.1 512 52.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 6.9e-136 488.4 509 52.7
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 9.0e-136 488.0 508 50.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 3.4e-135 486.1 515 53.4
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 4.4e-135 485.7 495 51.3
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 4.4e-135 485.7 509 51.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.3e-134 484.2 516 50.2
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 1.7e-134 483.8 495 52.3
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.7e-134 483.8 492 53.0
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 6.4e-134 481.9 507 51.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 5.4e-133 478.8 495 51.7
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.6e-132 477.2 499 51.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.0e-131 473.0 497 50.7
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 3.9e-131 472.6 507 50.5
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 5.1e-131 472.2 509 50.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.1e-130 471.1 496 50.2
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-130 470.7 499 50.5
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 7.3e-130 468.4 493 52.1
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 3.6e-129 466.1 497 50.7
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 4.0e-128 462.6 509 49.9
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 6.9e-128 461.8 513 50.7
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 2.0e-127 460.3 499 50.1
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 3.4e-127 459.5 510 49.8
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 4.5e-127 459.1 498 49.8
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.7e-126 457.2 501 48.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.2e-126 456.8 500 50.8
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.7e-124 449.9 528 48.7
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.5e-124 449.5 512 49.6
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.3e-123 446.8 418 54.1
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 3.4e-119 433.0 516 47.9
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.1e-117 427.9 386 57.0
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.4e-117 427.6 514 43.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.3e-113 414.5 499 47.5
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 4.0e-112 409.5 342 57.3
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 2.6e-111 406.8 468 49.4
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 6.5e-110 402.1 493 44.4
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.1e-109 401.4 505 46.7
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 6.0e-108 395.6 380 55.3
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.3e-107 393.7 475 45.5
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 4.8e-105 386.0 493 44.2
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.4e-96 357.8 394 48.7
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 4.2e-93 346.3 508 42.3
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.5e-93 345.9 271 62.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 7.0e-88 328.9 335 49.3
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 2.8e-81 307.0 328 53.0
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-73 281.6 198 66.7
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-73 281.6 198 66.7
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.5e-69 267.3 328 45.1
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.5e-63 246.9 219 54.8
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 4.7e-60 236.5 512 34.2
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 4.0e-59 233.4 428 32.2
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.3e-54 218.4 213 51.6
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 5.0e-54 216.5 400 34.0
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 8.9e-51 205.7 430 32.8
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.4e-40 171.8 393 30.5
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 2.4e-32 144.4 188 47.3
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-31 141.7 177 50.3
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 8.9e-27 125.9 173 36.4
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 6.4e-25 119.8 115 49.6
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 3.2e-24 117.5 115 50.4
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 5.4e-24 116.7 142 43.7
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 7.8e-23 112.8 142 43.0
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 7.3e-21 106.3 116 46.6
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.7e-15 87.8 117 41.9
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 3.9e-14 84.0 226 27.0
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.6e-12 77.4 116 38.8
MELO3C032760.2 Cucumis melo HOM05D000018 ORTHO05D001333 7.9e-07 59.7 36 75.0


User provided reference genes

Program Settings