Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013647.2 Cucumis melo HOM05D000147 ORTHO05D171452 9.1e-128 460.3 241 100.0
MELO3C023601.2 Cucumis melo HOM05D000147 ORTHO05D005311 8.8e-22 108.2 129 55.8
CsaV3_7G030550 Cucumis sativus L. HOM05D000147 ORTHO05D005311 1.1e-21 107.8 132 54.5
ClCG09G004590 Citrullus lanatus HOM05D000147 ORTHO05D005311 4.8e-20 102.4 133 52.6
FAN07G2667 Fragaria x ananassa HOM05D000147 ORTHO05D005311 5.7e-13 79.0 100 46.0
RcHm_v2.0_Chr4g0446611 Rosa chinensis HOM05D000147 ORTHO05D005311 9.7e-13 78.2 125 41.6
CANSAT64G1147 Cannabis sativa HOM05D000147 ORTHO05D005311 4.8e-12 75.9 80 52.5
Actinidia04308 Actinidia chinensis HOM05D000147 ORTHO05D005311 1.4e-11 74.3 94 51.1
FAN12G4124 Fragaria x ananassa HOM05D000147 ORTHO05D005311 1.4e-11 74.3 65 58.5
Hund08554 Selenicereus undatus HOM05D000147 ORTHO05D005311 1.4e-11 74.3 73 50.7
TAR381G0407 Trochodendron aralioides HOM05D000147 ORTHO05D005311 2.4e-11 73.6 91 45.1
CiPaw.05G168400 Carya illinoinensis HOM05D000147 ORTHO05D005311 1.2e-10 71.2 73 54.8
AUR62017703 Chenopodium quinoa HOM05D000147 ORTHO05D005311 1.6e-10 70.9 114 41.2
TWI77G0661 Tripterygium wilfordii HOM05D000147 ORTHO05D005311 1.6e-10 70.9 113 40.7
Gorai.008G149300 Gossypium raimondii HOM05D000147 ORTHO05D005311 2.0e-10 70.5 66 59.1
Nitab4.5_0008057g0020 Nicotiana tabacum HOM05D000147 ORTHO05D005311 2.0e-10 70.5 71 54.9
Nn5g28890 Nelumbo nucifera HOM05D000147 ORTHO05D005311 3.5e-10 69.7 66 60.6
Thecc.02G160800 Theobroma cacao HOM05D000147 ORTHO05D005311 3.5e-10 69.7 66 60.6
Ah.01g012370 Amaranthus hybridus HOM05D000147 ORTHO05D005311 5.9e-10 68.9 65 56.9
FAN17G2876 Fragaria x ananassa HOM05D000147 ORTHO05D005311 5.9e-10 68.9 77 50.6
GSVIVG01012038001 Vitis vinifera HOM05D000147 ORTHO05D005311 7.7e-10 68.6 62 61.3
QL03p044068 Quercus lobata HOM05D000147 ORTHO05D005311 1.3e-09 67.8 84 48.8
BcaC01g01214 Brassica carinata HOM05D000147 ORTHO05D005311 1.7e-09 67.4 87 44.8
C03p89500 Brassica napus HOM05D000147 ORTHO05D005311 1.7e-09 67.4 87 44.8
BolC3t21264H Brassica oleracea HOM05D000147 ORTHO05D005311 1.7e-09 67.4 87 44.8
Duzib248G1409 Durio zibethinus HOM05D000147 ORTHO05D005311 2.2e-09 67.0 66 57.6
Lj6C720G7 Lonicera japonica HOM05D000147 ORTHO05D005311 2.2e-09 67.0 66 59.1
Migut.I00007 Erythranthe guttata HOM05D000147 ORTHO05D005311 2.9e-09 66.6 50 62.0
SGA_v2.0_scaffold90G27912 Striga asiatica HOM05D000147 ORTHO05D005311 2.9e-09 66.6 85 47.1
Duzib132G0553 Durio zibethinus HOM05D000147 ORTHO05D005311 3.8e-09 66.2 92 41.3
A08p03310 Brassica napus HOM05D000147 ORTHO05D005311 5.0e-09 65.9 87 43.7
BraA08t32364Z Brassica rapa HOM05D000147 ORTHO05D005311 5.0e-09 65.9 87 43.7
Eucgr.G02569 Eucalyptus grandis HOM05D000147 ORTHO05D005311 6.5e-09 65.5 116 39.7
Aa31LG8G6540 Aethionema arabicum HOM05D000147 ORTHO05D005311 1.1e-08 64.7 88 44.3
AL1G57780 Arabidopsis lyrata HOM05D000147 ORTHO05D005311 1.1e-08 64.7 62 54.8
Aqoxy6G00466 Aquilegia oxysepala HOM05D000147 ORTHO05D005311 1.5e-08 64.3 107 38.3
Cc11_g00140 Coffea canephora HOM05D000147 ORTHO05D005311 3.2e-08 63.2 66 59.1
Rhsim09G0074800 Rhododendron simsii HOM05D000147 ORTHO05D005311 4.2e-08 62.8 91 39.6
THA.LOC104826507 Tarenaya hassleriana HOM05D000147 ORTHO05D005311 4.2e-08 62.8 73 49.3
Sp1g37010 Schrenkiella parvula HOM05D000147 ORTHO05D005311 5.5e-08 62.4 47 61.7
Carub.0001s3929 Capsella rubella HOM05D000147 ORTHO05D005311 1.6e-07 60.8 68 52.9
Thhalv10011206m.g Eutrema salsugineum HOM05D000147 ORTHO05D005311 2.7e-07 60.1 62 48.4
Nitab4.5_0000739g0020 Nicotiana tabacum HOM05D000147 ORTHO05D005311 2.7e-07 60.1 47 59.6
CARHR040190 Cardamine hirsuta HOM05D000147 ORTHO05D005311 3.6e-07 59.7 85 41.2
PGR142G0037 Punica granatum HOM05D000147 ORTHO05D005311 3.6e-07 59.7 63 57.1
Oeu016388.3 Olea europaea HOM05D000147 ORTHO05D005311 8.0e-07 58.5 87 48.3
TPR.G32339 Trifolium pratense HOM05D000147 ORTHO05D005311 8.0e-07 58.5 62 58.1
Phvul.011G030700 Phaseolus vulgaris HOM05D000147 ORTHO05D005311 1.8e-06 57.4 66 50.0
Zm00001eb194420 Zea mays HOM05D000147 ORTHO05D005311 1.8e-06 57.4 78 47.4
Glyma.12G027500 Glycine max HOM05D000147 ORTHO05D005311 6.8e-06 55.5 65 47.7


User provided reference genes

Program Settings