Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 5.7e-43 177.2 89 100.0
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.0e-39 166.4 89 93.3
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 1.1e-35 152.9 89 87.6
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 3.8e-31 137.9 74 94.6
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 5.0e-31 137.5 90 78.9
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 8.5e-31 136.7 101 70.3
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 3.2e-30 134.8 89 77.5
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 4.2e-30 134.4 89 75.3
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 5.5e-30 134.0 92 78.3
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.5e-30 134.0 91 75.8
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 7.2e-30 133.7 94 72.3
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.2e-29 132.9 95 73.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.6e-29 132.5 89 76.4
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.6e-29 132.5 86 76.7
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.7e-29 131.0 91 75.8
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 6.1e-29 130.6 92 75.0
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 6.1e-29 130.6 94 70.2
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.1e-29 130.6 92 70.7
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 8.0e-29 130.2 93 72.0
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 1.4e-28 129.4 89 75.3
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 1.4e-28 129.4 87 73.6
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.8e-28 129.0 93 71.0
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.8e-28 129.0 87 73.6
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 5.2e-28 127.5 93 71.0
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 5.2e-28 127.5 89 73.0
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 6.7e-28 127.1 97 69.1
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 8.8e-28 126.7 104 65.4
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.5e-27 125.9 89 74.2
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-27 125.9 89 74.2
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.0e-27 125.6 89 74.2
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.3e-27 124.8 93 71.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 3.3e-27 124.8 90 71.1
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 5.7e-27 124.0 91 70.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 5.7e-27 124.0 89 69.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 5.7e-27 124.0 99 64.6
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 5.7e-27 124.0 91 70.3
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 7.5e-27 123.6 91 68.1
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 7.5e-27 123.6 91 68.1
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.2e-26 122.1 89 70.8
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 4.8e-26 120.9 90 70.0
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 1.8e-25 119.0 99 65.7
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 3.1e-25 118.2 89 69.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 3.1e-25 118.2 92 71.7
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 5.3e-25 117.5 96 63.5
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 5.3e-25 117.5 99 61.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 7.0e-25 117.1 89 65.2
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 9.1e-25 116.7 99 60.6
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 9.1e-25 116.7 89 64.0
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 1.2e-24 116.3 90 64.4
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.2e-24 116.3 99 60.6
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.6e-24 115.9 99 60.6
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 2.7e-24 115.2 90 64.4
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.7e-24 115.2 96 65.6
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 3.5e-24 114.8 94 61.7
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.5e-24 114.4 84 71.4
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 7.7e-24 113.6 87 67.8
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 7.7e-24 113.6 87 67.8
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 7.7e-24 113.6 87 67.8
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.0e-23 113.2 93 60.2
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.3e-23 112.8 93 60.2
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.3e-23 112.8 93 60.2
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 5.0e-23 110.9 94 62.8
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 6.5e-23 110.5 97 60.8
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 6.5e-23 110.5 89 66.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 1.1e-22 109.8 84 65.5
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.5e-22 109.4 90 61.1
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 1.9e-22 109.0 78 71.8
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.2e-22 107.8 94 61.7
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.2e-22 107.8 94 61.7
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 4.2e-22 107.8 83 66.3
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 5.5e-22 107.5 95 61.1
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 5.5e-22 107.5 94 62.8
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 7.2e-22 107.1 92 60.9
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 7.2e-22 107.1 97 55.7
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 9.4e-22 106.7 54 90.7
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.2e-21 106.3 90 61.1
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 1.6e-21 105.9 95 58.9
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 1.6e-21 105.9 95 58.9
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 1.6e-21 105.9 85 65.9
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 2.1e-21 105.5 88 64.8
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 2.1e-21 105.5 91 61.5
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 2.1e-21 105.5 79 69.6
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 4.7e-21 104.4 54 88.9
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 6.1e-21 104.0 86 64.0
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.0e-20 103.2 76 72.4
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.8e-20 102.4 101 59.4
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 2.3e-20 102.1 79 68.4
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 2.3e-20 102.1 74 68.9
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 3.0e-20 101.7 94 58.5
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 3.0e-20 101.7 78 69.2
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 4.0e-20 101.3 77 67.5
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 8.8e-20 100.1 81 69.1
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.0e-19 99.0 71 69.0
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.6e-19 98.6 87 64.4
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 3.4e-19 98.2 96 55.2
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 4.4e-19 97.8 54 81.5
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.7e-18 95.9 83 60.2
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 1.1e-17 93.2 75 64.0
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 1.4e-17 92.8 73 64.4
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 7.0e-17 90.5 77 64.9
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 1.3e-15 86.3 78 59.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 8.6e-15 83.6 55 76.4
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 8.6e-15 83.6 79 60.8
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.1e-14 83.2 70 62.9
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.9e-14 82.4 82 56.1
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 5.5e-14 80.9 62 67.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 9.5e-14 80.1 50 82.0
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 6.1e-13 77.4 55 70.9
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.8e-12 75.9 59 64.4
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.7e-07 59.3 45 73.3
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.7e-07 59.3 45 73.3
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.9e-06 55.8 72 44.4
Pp3c2_9610 Physcomitrium patens HOM05D007135 ORTHO05D008880 3.3e-06 55.1 55 49.1
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 4.3e-06 54.7 72 44.4
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.3e-06 53.9 59 52.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 7.3e-06 53.9 43 62.8
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 9.5e-06 53.5 55 50.9
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 9.5e-06 53.5 39 64.1


User provided reference genes

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