Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 2.0e-261 905.2 456 100.0
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 3.2e-243 844.7 456 93.6
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.5e-232 809.3 452 90.5
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 6.0e-181 637.9 453 70.4
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 5.3e-177 624.8 438 70.3
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 3.8e-175 618.6 453 68.7
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 4.9e-175 618.2 452 67.0
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 1.1e-174 617.1 452 68.1
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 7.1e-174 614.4 452 66.8
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 1.6e-173 613.2 447 67.3
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.6e-173 613.2 453 66.7
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.6e-173 611.7 438 69.4
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.6e-173 611.7 438 69.4
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 4.6e-173 611.7 460 67.0
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.3e-172 610.1 438 68.7
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 3.9e-172 608.6 438 68.5
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 8.7e-172 607.4 434 68.2
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 8.7e-172 607.4 446 66.8
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 1.5e-171 606.7 439 68.6
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.3e-171 605.5 446 66.8
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 1.3e-170 603.6 460 66.3
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 2.8e-170 602.4 437 67.7
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 1.1e-169 600.5 453 67.1
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.8e-169 599.7 438 68.9
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 1.8e-169 599.7 438 67.8
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.1e-169 599.0 438 68.3
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 3.1e-169 599.0 438 67.6
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 5.3e-169 598.2 452 65.9
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 6.9e-169 597.8 456 66.7
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 9.0e-169 597.4 438 68.5
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 1.5e-168 596.7 431 67.7
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 5.9e-168 594.7 435 67.4
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 5.9e-168 594.7 438 67.1
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 7.6e-168 594.3 449 66.1
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 7.6e-168 594.3 438 67.8
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.7e-167 593.2 451 66.3
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 1.7e-167 593.2 453 66.4
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 2.9e-167 592.4 438 67.1
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 6.5e-167 591.3 434 67.1
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 6.5e-167 591.3 438 67.1
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.4e-166 590.1 468 64.3
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 1.4e-166 590.1 438 67.1
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 1.4e-166 590.1 448 66.3
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.9e-166 589.7 438 66.4
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 2.5e-166 589.3 452 65.7
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 2.5e-166 589.3 484 63.0
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 3.2e-166 589.0 434 67.1
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 4.2e-166 588.6 438 66.4
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 7.2e-166 587.8 438 66.2
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 7.2e-166 587.8 434 66.8
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 1.2e-165 587.0 446 66.8
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 1.6e-165 586.6 451 65.4
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 1.6e-165 586.6 447 65.1
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 3.6e-165 585.5 359 82.5
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 1.0e-164 583.9 452 65.3
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.0e-164 583.9 438 65.8
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 2.3e-164 582.8 438 67.1
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 3.9e-164 582.0 438 67.1
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.1e-163 580.5 434 67.3
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 1.1e-163 580.5 434 66.4
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.5e-163 580.1 438 66.4
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 2.5e-163 579.3 438 66.0
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 7.4e-163 577.8 448 64.1
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 1.6e-162 576.6 434 65.9
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 2.2e-162 576.2 434 66.1
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 2.2e-162 576.2 438 65.8
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 6.3e-162 574.7 453 64.0
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 6.3e-162 574.7 438 65.8
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 8.2e-162 574.3 434 66.4
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 1.1e-161 573.9 456 63.6
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 1.8e-161 573.2 477 61.8
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 3.1e-161 572.4 453 64.7
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 5.3e-161 571.6 441 66.4
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 6.9e-161 571.2 428 68.2
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 1.2e-160 570.5 470 62.3
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.5e-160 570.1 434 64.7
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.3e-159 567.0 488 60.0
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 2.7e-157 559.3 448 64.3
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 5.1e-156 555.1 451 64.1
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 2.0e-155 553.1 421 66.0
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 8.2e-154 547.7 452 63.3
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 4.5e-152 542.0 446 62.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 1.1e-150 537.3 424 65.6
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 4.2e-150 535.4 429 62.9
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 1.4e-145 520.4 396 63.9
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 1.4e-145 520.4 435 61.4
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 2.2e-143 513.1 408 63.0
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 2.9e-143 512.7 414 63.0
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 1.1e-142 510.8 426 62.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 1.7e-138 496.9 438 59.6
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 2.3e-132 476.5 421 60.8
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.5e-131 473.8 357 68.6
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.7e-130 470.3 351 68.7
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 2.2e-130 469.9 392 60.2
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 8.3e-130 468.0 387 59.9
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 3.1e-129 466.1 426 54.9
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 5.4e-129 465.3 433 56.8
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 3.8e-127 459.1 352 66.5
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 3.8e-127 459.1 350 67.1
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 3.3e-126 456.1 363 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 7.2e-126 454.9 432 54.9
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 3.0e-124 449.5 431 53.4
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 5.2e-124 448.7 419 56.6
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 4.1e-121 439.1 359 63.8
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 4.5e-120 435.6 424 53.3
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 1.9e-118 430.3 445 54.4
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 2.0e-115 420.2 319 66.8
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.1e-113 414.5 338 61.8
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 2.5e-102 376.7 587 38.0
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 1.8e-100 370.5 348 56.6
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.5e-99 367.5 451 46.8
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 2.4e-97 360.1 270 65.6
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 8.1e-93 345.1 272 63.6
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 1.2e-91 341.3 382 52.4
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.7e-90 337.4 385 48.8
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.0e-87 326.6 237 67.1
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 1.6e-85 320.9 273 61.2
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 2.1e-85 320.5 284 57.0
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 1.1e-81 308.1 235 64.3
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.3e-77 294.7 452 38.9
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 9.0e-76 288.5 228 61.8
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 9.0e-76 288.5 430 40.9
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 6.4e-74 282.3 442 40.5
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 7.9e-72 275.4 356 47.2
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 2.1e-69 267.3 234 59.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 2.1e-69 267.3 413 40.9
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 3.1e-68 263.5 217 61.8
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 5.3e-68 262.7 485 35.7
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 3.5e-64 250.0 152 78.9
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 8.7e-63 245.4 153 75.8
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 1.6e-61 241.1 181 66.3
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.6e-59 233.8 383 39.2
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 1.3e-58 231.5 150 74.7
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 1.4e-57 228.0 146 75.3
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 1.9e-57 227.6 433 36.0
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.7e-56 223.8 141 74.5
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 9.0e-52 208.8 451 33.7
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 1.6e-48 198.0 134 69.4
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 6.7e-47 192.6 118 78.8
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 1.7e-45 188.0 274 45.6
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 8.2e-45 185.7 132 68.9
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 5.3e-44 183.0 111 74.8
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 2.2e-34 151.0 101 73.3
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 3.6e-32 143.7 123 65.0
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.7e-29 134.8 92 69.6
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.7e-29 134.8 92 69.6
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 1.8e-28 131.3 441 26.8
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.1e-20 104.0 61 80.3
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 2.0e-14 84.7 356 24.2
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 9.1e-12 75.9 66 56.1
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 3.5e-11 73.9 56 62.5
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 6.6e-10 69.7 45 75.6
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 1.9e-09 68.2 65 50.8
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 2.5e-09 67.8 43 62.8
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 3.3e-09 67.4 60 53.3
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 9.5e-09 65.9 45 68.9
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 1.2e-08 65.5 116 37.1
SHI41529 Sapria himalayana HOM05D004598 ORTHO05D005550 4.4e-06 57.0 65 46.2


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