Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.7e-205 719.2 366 100.0
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 5.9e-195 684.1 368 95.7
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 9.1e-180 633.6 368 87.8
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.1e-153 547.0 369 76.4
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.1e-129 467.2 361 67.0
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 1.6e-128 463.4 368 66.0
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 4.8e-128 461.8 367 65.1
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.4e-127 459.5 372 65.3
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.1e-127 459.1 314 72.3
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 6.9e-127 458.0 347 67.1
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 7.6e-126 454.5 367 66.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 2.9e-125 452.6 364 65.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 3.8e-125 452.2 349 66.8
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 6.4e-125 451.4 366 62.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 6.4e-125 451.4 365 64.7
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 8.4e-125 451.1 314 71.3
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 5.4e-124 448.4 367 65.9
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.1e-123 446.4 328 69.2
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.7e-123 446.0 328 67.4
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.5e-123 445.7 365 64.1
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 3.9e-122 442.2 328 67.7
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 1.9e-121 439.9 362 64.1
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 3.3e-121 439.1 367 62.9
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 4.3e-121 438.7 307 71.3
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 7.4e-121 438.0 365 62.2
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 1.6e-120 436.8 367 63.5
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 2.1e-120 436.4 352 65.1
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.4e-119 433.7 352 63.9
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.8e-119 433.3 367 62.7
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 1.2e-118 430.6 321 66.7
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 4.5e-118 428.7 366 62.3
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.7e-117 426.8 357 63.9
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 2.2e-117 426.4 367 61.3
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.8e-117 425.6 302 67.9
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 4.9e-117 425.2 364 63.5
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.1e-116 424.1 369 61.8
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.1e-116 424.1 304 68.1
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.2e-116 422.5 316 67.1
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 7.1e-116 421.4 308 69.2
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 1.2e-115 420.6 366 60.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 3.5e-115 419.1 366 60.7
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 3.5e-115 419.1 366 60.7
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 3.5e-115 419.1 366 60.7
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 3.5e-115 419.1 366 60.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.0e-114 417.5 366 60.1
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.8e-114 416.8 330 64.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 3.9e-114 415.6 369 62.3
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 6.7e-114 414.8 338 63.0
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 8.7e-114 414.5 307 66.4
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 2.5e-113 412.9 299 67.2
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 3.3e-113 412.5 315 65.7
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 7.4e-113 411.4 308 67.2
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 9.6e-113 411.0 361 59.6
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 2.1e-112 409.8 326 62.9
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 4.8e-112 408.7 315 65.4
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 6.2e-112 408.3 315 64.4
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 8.1e-112 407.9 335 61.8
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 8.1e-112 407.9 304 65.8
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.8e-111 406.8 308 67.2
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.8e-111 406.8 301 67.1
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 5.3e-111 405.2 301 66.4
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 9.0e-111 404.4 307 65.8
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 3.4e-110 402.5 333 62.2
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 4.5e-110 402.1 317 65.0
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 4.5e-110 402.1 318 63.2
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 7.6e-110 401.4 339 62.2
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.3e-109 400.6 363 58.1
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 2.2e-109 399.8 308 65.6
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 4.9e-109 398.7 364 59.1
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.1e-108 397.5 314 65.3
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.4e-108 397.1 340 59.7
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.9e-108 396.7 344 60.2
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.9e-108 396.7 303 66.3
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 3.2e-108 396.0 314 64.3
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.1e-107 393.3 365 59.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.3e-106 390.6 299 64.9
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 5.1e-106 388.7 356 57.3
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.5e-105 387.1 303 63.4
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 1.5e-105 387.1 315 61.6
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.6e-104 383.6 308 62.3
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 6.9e-103 378.3 414 51.9
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 7.6e-102 374.8 320 59.1
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.9e-101 372.9 308 60.4
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 1.5e-97 360.5 305 59.7
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 3.1e-95 352.8 278 64.4
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 9.0e-95 351.3 310 55.5
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.6e-94 349.7 267 65.2
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.3e-93 347.4 299 61.9
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 2.9e-93 346.3 268 64.6
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 6.7e-90 335.1 365 52.3
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.4e-87 327.4 299 57.9
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 5.3e-87 325.5 267 58.4
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 2.0e-86 323.6 339 52.5
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 2.6e-86 323.2 299 56.9
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.0e-82 311.2 272 57.0
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 4.4e-81 305.8 329 49.2
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 2.0e-78 297.0 308 53.6
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.0e-65 253.8 265 54.7
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 3.8e-61 239.6 368 39.7
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 7.0e-55 218.8 256 44.9
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 5.0e-53 212.6 229 51.1
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 4.3e-52 209.5 186 57.5
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 4.0e-50 203.0 133 72.9
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 3.5e-46 189.9 194 59.3
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.9e-44 184.1 188 51.1
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-43 181.4 135 61.5
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-43 181.0 135 61.5
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 4.7e-43 179.5 135 60.0
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 7.8e-38 162.2 126 62.7
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 2.1e-35 154.1 133 57.1
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 6.2e-27 125.9 109 53.2
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.4e-26 124.8 208 36.1
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 7.6e-25 119.0 198 33.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.9e-25 118.6 97 55.7
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.2e-17 95.1 117 43.6
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 2.5e-12 77.4 63 60.3
CBR_g21127 Chara braunii HOM05D053129 ORTHO05D043957 4.2e-07 60.1 197 28.4
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 5.4e-07 59.7 55 50.9
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 9.3e-07 58.9 96 35.4
Rhsim01G0029400 Rhododendron simsii HOM05D001219 ORTHO05D001017 7.9e-06 55.8 81 33.3


User provided reference genes

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