Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.5e-124 447.6 275 100.0
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 7.0e-114 414.5 275 84.7
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.7e-91 340.1 293 70.6
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 3.2e-82 309.3 286 60.5
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 7.1e-50 201.8 285 47.4
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 2.1e-49 200.3 285 41.4
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.9e-47 193.7 289 46.4
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 3.3e-47 193.0 287 48.4
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.6e-46 190.7 297 48.5
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.2e-44 184.5 271 46.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 7.7e-44 181.8 262 40.5
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.4e-42 177.6 287 47.7
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 3.2e-42 176.4 265 43.8
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 4.2e-42 176.0 271 46.5
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 9.4e-42 174.9 277 38.3
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.8e-40 170.6 248 41.9
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 2.3e-40 170.2 259 41.3
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.1e-39 167.9 255 43.5
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.5e-39 166.8 265 41.5
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 3.3e-39 166.4 293 40.6
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 4.3e-39 166.0 274 40.9
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 5.7e-39 165.6 302 42.1
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.3e-38 164.5 248 45.2
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.8e-38 163.3 299 43.1
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 4.8e-38 162.5 259 43.2
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 4.8e-38 162.5 276 36.6
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 4.8e-38 162.5 267 44.6
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 8.2e-38 161.8 278 37.8
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 2.4e-37 160.2 276 39.5
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 5.3e-37 159.1 248 36.3
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 6.9e-37 158.7 256 38.3
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.9e-37 158.7 242 45.9
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.9e-37 158.7 242 45.9
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 9.1e-37 158.3 307 37.8
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.2e-36 157.9 237 50.2
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.5e-36 157.5 287 35.9
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 2.0e-36 157.1 268 51.5
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.6e-36 156.8 279 46.2
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.6e-36 156.8 275 38.2
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 4.5e-36 156.0 262 48.1
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.0e-35 154.8 273 38.5
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.3e-35 154.5 291 40.9
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.3e-35 154.5 284 45.8
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.7e-35 154.1 268 47.4
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.7e-35 154.1 256 36.7
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 1.7e-35 154.1 311 36.0
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.8e-35 152.9 262 48.1
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 3.8e-35 152.9 258 39.9
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 5.0e-35 152.5 248 37.9
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 8.5e-35 151.8 296 36.5
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.9e-34 150.6 286 42.0
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 2.5e-34 150.2 184 42.9
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.5e-34 150.2 245 37.6
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 5.5e-34 149.1 283 44.9
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 5.5e-34 149.1 263 37.3
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 5.5e-34 149.1 283 39.2
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.2e-33 147.9 298 41.9
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.6e-33 147.5 248 39.1
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 2.7e-33 146.7 274 38.3
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 6.1e-33 145.6 233 46.8
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 7.9e-33 145.2 283 42.4
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 7.9e-33 145.2 255 43.5
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.8e-32 144.1 283 45.6
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 5.1e-32 142.5 268 45.5
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.5e-31 141.0 274 35.4
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 5.7e-31 139.0 296 41.2
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 9.7e-31 138.3 225 41.3
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 6.3e-30 135.6 179 44.7
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 8.2e-30 135.2 277 38.6
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.4e-29 134.4 234 46.2
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.4e-29 134.4 192 39.6
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 3.1e-29 133.3 230 40.4
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.5e-28 131.0 275 45.1
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.0e-28 130.6 177 42.9
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.0e-28 130.6 211 41.7
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.6e-28 130.2 189 40.2
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 1.0e-27 128.3 274 39.8
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 1.3e-27 127.9 306 33.3
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.0e-27 125.9 190 38.9
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 6.5e-27 125.6 287 43.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 6.5e-27 125.6 287 43.9
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.5e-26 124.4 269 44.2
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.6e-25 120.9 275 44.0
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 8.0e-25 118.6 276 42.0
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 3.3e-23 113.2 334 30.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 3.7e-22 109.8 331 34.7
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.4e-21 107.1 173 35.8
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 7.7e-20 102.1 163 39.9
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.0e-19 101.7 317 30.6
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.2e-17 94.7 154 40.3
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 4.0e-16 89.7 158 42.4
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.6e-09 67.8 173 45.7
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 8.0e-09 65.5 46 58.7
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 5.2e-08 62.8 111 51.4
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.5e-07 61.2 91 42.9
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.5e-07 61.2 273 26.7


User provided reference genes

Program Settings