Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 0.0e+00 1298.1 704 100.0
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 1.9e-282 975.7 771 73.3
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 1.7e-230 803.1 681 68.9
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 1.2e-127 461.5 770 44.4
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 4.5e-34 150.6 649 30.8
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.2e-31 142.5 654 29.4
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.7e-28 131.0 652 28.4
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 8.2e-28 129.8 722 27.3
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 2.4e-27 128.3 625 27.7
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 4.1e-27 127.5 701 29.2
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 3.8e-25 120.9 725 28.8
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 3.0e-22 111.3 669 28.4
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 6.8e-22 110.2 689 26.3
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 1.5e-21 109.0 760 27.1
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.6e-21 108.2 634 28.4
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 4.8e-20 104.0 632 25.6
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 8.3e-20 103.2 695 25.3
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.4e-19 102.4 641 27.6
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 3.1e-19 101.3 668 25.1
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 7.0e-19 100.1 700 27.0
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 1.6e-18 99.0 645 27.8
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 4.5e-18 97.4 662 26.7
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 4.5e-18 97.4 644 26.6
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 7.7e-18 96.7 636 26.1
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 1.3e-17 95.9 668 26.2
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 3.8e-17 94.4 712 25.6
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 8.5e-17 93.2 643 26.6
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 8.5e-17 93.2 633 28.0
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.5e-16 92.4 748 25.4
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 5.5e-16 90.5 212 35.8
RcHm_v2.0_Chr2g0140811 Rosa chinensis HOM05D008208 ORTHO05D010143 7.2e-16 90.1 568 26.9
Dinv30428 Davidia involucrata HOM05D008208 ORTHO05D010143 9.4e-16 89.7 146 50.7
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 3.6e-15 87.8 751 24.2
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 8.0e-15 86.7 692 24.9
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 6.8e-14 83.6 862 24.9
Gohir.D10G066500 Gossypium hirsutum HOM05D008208 ORTHO05D010143 4.4e-13 80.9 633 26.9
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 7.5e-13 80.1 764 24.6
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 7.5e-13 80.1 678 23.5
Eucgr.F03082 Eucalyptus grandis HOM05D008208 ORTHO05D010143 1.7e-12 79.0 695 24.9
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 1.1e-11 76.3 640 25.0
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 1.4e-11 75.9 815 25.8
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 3.1e-11 74.7 638 26.3
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 3.1e-11 74.7 759 24.9
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 5.4e-11 73.9 667 26.1
SalBow2G3317 Salvia bowleyana HOM05D008208 ORTHO05D010143 9.1e-11 73.2 686 26.2
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.6e-10 72.4 649 23.9
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 2.0e-10 72.0 674 24.2
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 1.3e-09 69.3 259 29.0
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 2.9e-09 68.2 166 41.0
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 1.5e-08 65.9 195 34.4
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 1.6e-07 62.4 679 25.3
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 2.1e-07 62.0 287 25.4
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 3.6e-07 61.2 169 35.5
ATR0705G064 Amborella trichopoda HOM05D008208 ORTHO05D010143 6.1e-07 60.5 676 25.0
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 8.0e-07 60.1 657 26.2
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 1.4e-06 59.3 213 31.0
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 1.4e-06 59.3 85 42.4
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 5.2e-06 57.4 704 24.3
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 5.2e-06 57.4 105 35.2
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 5.2e-06 57.4 188 31.9
CDE05G0720 Ceratophyllum demersum HOM05D008208 ORTHO05D010143 6.8e-06 57.0 115 37.4
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 8.9e-06 56.6 296 26.0


User provided reference genes

Program Settings