Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 4.4e-83 311.2 155 100.0
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.4e-68 263.1 155 87.1
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.7e-58 229.6 153 81.7
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 4.0e-36 155.2 156 57.7
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 1.1e-28 130.6 187 44.9
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.6e-27 125.9 167 47.9
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 4.2e-25 118.6 168 49.4
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.2e-24 117.1 169 50.9
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.6e-24 116.7 165 46.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 4.6e-24 115.2 163 44.8
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 4.6e-24 115.2 165 47.9
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 7.9e-24 114.4 156 46.2
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.0e-23 114.0 162 48.1
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.3e-23 112.8 152 48.0
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 3.9e-23 112.1 160 48.1
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 5.1e-23 111.7 158 46.8
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.1e-22 110.5 168 47.0
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 5.7e-22 108.2 171 43.9
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.6e-21 106.7 173 46.2
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.7e-21 105.5 180 43.3
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 4.8e-21 105.1 168 43.5
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.8e-20 103.2 162 47.5
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 2.4e-20 102.8 152 42.8
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 3.1e-20 102.4 156 44.2
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 4.0e-20 102.1 147 47.6
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 4.0e-20 102.1 153 41.8
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 4.0e-20 102.1 161 44.1
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 6.9e-20 101.3 151 43.7
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 6.9e-20 101.3 172 44.2
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 6.9e-20 101.3 160 42.5
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 9.0e-20 100.9 174 41.4
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 1.5e-19 100.1 142 47.2
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.6e-19 99.4 168 41.1
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 3.4e-19 99.0 167 43.1
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 7.6e-19 97.8 142 44.4
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 7.6e-19 97.8 163 39.9
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 7.6e-19 97.8 151 44.4
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 7.6e-19 97.8 164 43.3
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.3e-18 97.1 171 40.9
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.3e-18 97.1 172 44.2
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.3e-18 97.1 172 43.0
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.2e-18 96.3 168 41.7
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.8e-18 95.5 159 45.3
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 6.5e-18 94.7 139 44.6
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 8.4e-18 94.4 167 41.3
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 8.4e-18 94.4 174 44.8
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.1e-17 94.0 173 44.5
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 1.1e-17 94.0 166 44.0
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 1.1e-17 94.0 158 43.0
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.1e-17 94.0 161 46.0
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 1.4e-17 93.6 170 42.4
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 1.9e-17 93.2 163 43.6
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 3.2e-17 92.4 179 40.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 5.5e-17 91.7 165 40.6
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 5.5e-17 91.7 158 41.8
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.1e-17 91.3 137 43.8
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 9.3e-17 90.9 161 43.5
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 2.1e-16 89.7 127 45.7
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.6e-16 88.6 112 49.1
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.0e-15 87.4 164 40.9
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.0e-15 87.4 144 43.8
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.3e-15 87.0 154 46.8
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.8e-15 86.7 142 42.3
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.9e-15 85.5 105 51.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 5.1e-15 85.1 141 44.0
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 5.1e-15 85.1 156 44.2
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.7e-15 84.7 100 48.0
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 6.7e-15 84.7 103 49.5
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.1e-14 84.0 174 39.1
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 1.5e-14 83.6 164 40.2
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.9e-14 83.2 150 47.3
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.5e-14 82.8 168 39.3
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 2.5e-14 82.8 158 42.4
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 4.3e-14 82.0 155 43.9
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 9.7e-14 80.9 167 38.3
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 9.7e-14 80.9 165 37.0
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.6e-13 80.1 145 42.1
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-13 79.7 171 37.4
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.2e-13 79.7 147 40.8
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 2.2e-13 79.7 169 39.6
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 6.3e-13 78.2 129 44.2
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 8.2e-13 77.8 157 41.4
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.8e-12 76.6 139 41.7
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.8e-12 76.6 171 34.5
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.1e-12 75.9 158 43.0
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 3.1e-12 75.9 161 42.9
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 3.1e-12 75.9 165 35.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 6.9e-12 74.7 153 39.9
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.0e-12 74.3 132 43.2
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.2e-11 73.9 160 43.1
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.5e-11 73.6 145 43.4
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.0e-11 73.2 159 42.8
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.0e-11 73.2 159 42.8
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 3.4e-11 72.4 157 41.4
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-11 72.0 129 41.9
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 4.5e-11 72.0 77 55.8
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 4.5e-11 72.0 153 38.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.0e-10 70.9 149 41.6
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.0e-10 70.9 151 37.7
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.3e-10 70.5 136 40.4
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-10 69.7 96 45.8
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 2.9e-10 69.3 157 38.9
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 2.9e-10 69.3 161 34.8
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 1.9e-09 66.6 175 34.3
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 4.2e-09 65.5 132 41.7
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 1.8e-07 60.1 49 65.3
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 2.3e-07 59.7 50 66.0
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 5.1e-07 58.5 135 39.3
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 5.1e-07 58.5 163 36.2
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.5e-06 57.0 119 40.3
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 4.3e-06 55.5 135 37.8
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 9.7e-06 54.3 139 34.5


User provided reference genes

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