Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012860.2 Cucumis melo HOM05D006470 ORTHO05D007978 8.5e-170 600.9 474 100.0
ClCG07G001200 Citrullus lanatus HOM05D006470 ORTHO05D007978 1.7e-138 496.9 474 86.3
CsaV3_3G022070 Cucumis sativus L. HOM05D006470 ORTHO05D007978 1.0e-135 487.6 474 86.9
ClCG00G001450 Citrullus lanatus HOM05D006470 ORTHO05D007978 6.0e-99 365.5 203 88.2
Sed0015172 Sechium edule HOM05D006470 ORTHO05D007978 1.6e-91 340.9 472 72.0
Sed0003902 Sechium edule HOM05D006470 ORTHO05D007978 8.4e-85 318.5 475 70.9
Thecc.01G254400 Theobroma cacao HOM05D006470 ORTHO05D007978 5.1e-66 256.1 433 52.7
Duzib138G0951 Durio zibethinus HOM05D006470 ORTHO05D007978 1.9e-65 254.2 433 55.0
COL.COLO4_04011 Corchorus olitorius HOM05D006470 ORTHO05D007978 3.7e-64 250.0 426 55.2
Gorai.001G179700 Gossypium raimondii HOM05D006470 ORTHO05D007978 6.3e-64 249.2 470 49.4
Gohir.D07G156600 Gossypium hirsutum HOM05D006470 ORTHO05D007978 8.2e-64 248.8 470 48.9
Duzib133G1499 Durio zibethinus HOM05D006470 ORTHO05D007978 5.3e-63 246.1 434 53.9
Manes.13G036500 Manihot esculenta HOM05D006470 ORTHO05D007978 4.5e-62 243.0 434 53.7
QL09p040137 Quercus lobata HOM05D006470 ORTHO05D007978 1.4e-60 238.0 409 44.0
Haze_24664 Corylus avellana HOM05D006470 ORTHO05D007978 9.4e-60 235.3 204 58.8
Gohir.A07G150300 Gossypium hirsutum HOM05D006470 ORTHO05D007978 7.9e-59 232.3 470 56.0
Cfa002452 Carpinus fangiana HOM05D006470 ORTHO05D007978 1.4e-58 231.5 204 58.3
Manes.12G034500 Manihot esculenta HOM05D006470 ORTHO05D007978 2.3e-58 230.7 444 51.1
TWI12G0101 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 1.3e-56 224.9 423 56.3
FAN27G1109 Fragaria x ananassa HOM05D006470 ORTHO05D007978 3.7e-56 223.4 420 53.8
Hma1.2p1_0576F.1_g181850 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 8.2e-56 222.2 440 40.0
FAN24G3268 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.1e-55 221.9 420 50.2
FvH4_2g21070 Fragaria vesca HOM05D006470 ORTHO05D007978 1.8e-55 221.1 423 51.1
MD10G1180100 Malus domestica HOM05D006470 ORTHO05D007978 2.6e-54 217.2 427 45.7
Cpa.g.sc165.30 Carica papaya HOM05D006470 ORTHO05D007978 7.7e-54 215.7 424 52.1
Thhalv10027034m.g Eutrema salsugineum HOM05D006470 ORTHO05D007978 1.7e-53 214.5 406 43.8
FAN15G1173 Fragaria x ananassa HOM05D006470 ORTHO05D007978 3.8e-53 213.4 422 52.1
RcHm_v2.0_Chr6g0287531 Rosa chinensis HOM05D006470 ORTHO05D007978 5.0e-53 213.0 434 53.2
Dinv22382 Davidia involucrata HOM05D006470 ORTHO05D007978 8.5e-53 212.2 408 49.5
Sabra05G0175600 Salix brachista HOM05D006470 ORTHO05D007978 8.5e-53 212.2 425 54.8
TWI18G0736 Tripterygium wilfordii HOM05D006470 ORTHO05D007978 8.5e-53 212.2 425 52.2
FAN20G2495 Fragaria x ananassa HOM05D006470 ORTHO05D007978 1.1e-52 211.8 420 53.1
Prupe.8G220100 Prunus persica HOM05D006470 ORTHO05D007978 5.5e-52 209.5 186 58.1
Ciclev10020031m.g Citrus clementina HOM05D006470 ORTHO05D007978 7.2e-52 209.1 191 56.0
Potri.005G227600 Populus trichocarpa HOM05D006470 ORTHO05D007978 9.4e-52 208.8 436 52.5
CiPaw.03G267400 Carya illinoinensis HOM05D006470 ORTHO05D007978 4.7e-51 206.5 428 51.4
SGA_v2.0_scaffold1G00631 Striga asiatica HOM05D006470 ORTHO05D007978 2.0e-49 201.1 433 41.8
Rhsim13G0037300 Rhododendron simsii HOM05D006470 ORTHO05D007978 3.3e-49 200.3 426 55.4
BcaNung04289 Brassica carinata HOM05D006470 ORTHO05D007978 1.7e-48 198.0 407 43.2
CSS0034739 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 3.7e-48 196.8 423 54.4
SHI26693 Sapria himalayana HOM05D006470 ORTHO05D007978 3.7e-48 196.8 431 42.7
DCAR_012563 Daucus carota HOM05D006470 ORTHO05D007978 8.2e-48 195.7 425 44.2
Sp7g26550 Schrenkiella parvula HOM05D006470 ORTHO05D007978 8.2e-48 195.7 393 44.5
BraA01t00881Z Brassica rapa HOM05D006470 ORTHO05D007978 1.4e-47 194.9 393 44.5
CSS0011402 Camellia sinensis var. sinensis HOM05D006470 ORTHO05D007978 1.4e-47 194.9 423 54.8
Lj5g0015356 Lotus japonicus HOM05D006470 ORTHO05D007978 1.4e-47 194.9 438 47.7
Aa31LG2G21810 Aethionema arabicum HOM05D006470 ORTHO05D007978 4.5e-46 189.9 431 42.2
A01p09340 Brassica napus HOM05D006470 ORTHO05D007978 5.9e-46 189.5 393 44.3
Migut.D00451 Erythranthe guttata HOM05D006470 ORTHO05D007978 1.0e-45 188.7 453 51.0
Nitab4.5_0003295g0060 Nicotiana tabacum HOM05D006470 ORTHO05D007978 1.3e-45 188.3 423 48.9
arahy.Tifrunner.gnm1.ann1.NTND9X Arachis hypogaea HOM05D006470 ORTHO05D007978 2.2e-45 187.6 431 43.6
Ca_09663_v3 Cicer arietinum L. HOM05D006470 ORTHO05D007978 3.8e-45 186.8 452 44.5
Actinidia37529 Actinidia chinensis HOM05D006470 ORTHO05D007978 5.0e-45 186.4 427 47.5
AL7G23980 Arabidopsis lyrata HOM05D006470 ORTHO05D007978 5.0e-45 186.4 379 50.9
BcaNung04688 Brassica carinata HOM05D006470 ORTHO05D007978 5.0e-45 186.4 204 49.5
BcaNung04689 Brassica carinata HOM05D006470 ORTHO05D007978 5.0e-45 186.4 204 49.5
C01p10920 Brassica napus HOM05D006470 ORTHO05D007978 5.0e-45 186.4 405 45.7
Lsat_1_v5_gn_9_10681 Lactuca sativa HOM05D006470 ORTHO05D007978 8.5e-45 185.7 428 47.4
vmacro02686 Vaccinium macrocarpon HOM05D006470 ORTHO05D007978 1.1e-44 185.3 420 59.0
Aqoxy5G00193 Aquilegia oxysepala HOM05D006470 ORTHO05D007978 5.5e-44 183.0 440 51.6
Lalb_Chr25g0289891 Lupinus albus HOM05D006470 ORTHO05D007978 9.4e-44 182.2 423 50.6
Lj2P1147T22 Lonicera japonica HOM05D006470 ORTHO05D007978 1.2e-43 181.8 432 51.9
Nitab4.5_0001945g0030 Nicotiana tabacum HOM05D006470 ORTHO05D007978 1.2e-43 181.8 385 48.8
Carub.0007s1211 Capsella rubella HOM05D006470 ORTHO05D007978 1.6e-43 181.4 161 54.7
AUR62025485 Chenopodium quinoa HOM05D006470 ORTHO05D007978 1.6e-43 181.4 387 50.4
Medtr1g069695 Medicago truncatula HOM05D006470 ORTHO05D007978 8.0e-43 179.1 441 49.4
BcaC09g51655 Brassica carinata HOM05D006470 ORTHO05D007978 1.4e-42 178.3 415 44.1
BolC1t01056H Brassica oleracea HOM05D006470 ORTHO05D007978 1.4e-42 178.3 415 44.1
AT4G28560 Arabidopsis thaliana HOM05D006470 ORTHO05D007978 3.0e-42 177.2 406 50.7
Glyma.10G038800 Glycine max HOM05D006470 ORTHO05D007978 3.0e-42 177.2 467 38.8
Sc05g0003180 Simmondsia chinensis HOM05D006470 ORTHO05D007978 3.0e-42 177.2 414 47.3
CARHR236350 Cardamine hirsuta HOM05D006470 ORTHO05D007978 4.0e-42 176.8 405 47.7
HanXRQChr10g0280761 Helianthus annuus HOM05D006470 ORTHO05D007978 3.3e-41 173.7 433 48.5
THA.LOC104814525 Tarenaya hassleriana HOM05D006470 ORTHO05D007978 1.7e-40 171.4 154 53.2
PSO210G2696 Papaver somniferum HOM05D006470 ORTHO05D007978 1.4e-39 168.3 440 48.9
SalBow4G0507 Salvia bowleyana HOM05D006470 ORTHO05D007978 1.2e-38 165.2 412 41.5
Peaxi162Scf00415g00003 Petunia axillaris HOM05D006470 ORTHO05D007978 2.7e-38 164.1 399 45.9
Lsat_1_v5_gn_5_182700 Lactuca sativa HOM05D006470 ORTHO05D007978 3.5e-38 163.7 164 53.0
Cc01_g18070 Coffea canephora HOM05D006470 ORTHO05D007978 5.9e-38 162.9 435 53.8
MBI10_g13794_MAGBIO Magnolia biondii HOM05D006470 ORTHO05D007978 2.9e-37 160.6 430 49.3
Phvul.007G191000 Phaseolus vulgaris HOM05D006470 ORTHO05D007978 3.2e-36 157.1 440 44.5
PSO832G0066 Papaver somniferum HOM05D006470 ORTHO05D007978 5.5e-36 156.4 182 46.7
PGSC0003DMG400010325 Solanum tuberosum HOM05D006470 ORTHO05D007978 9.4e-36 155.6 151 50.3
TAR362G1291 Trochodendron aralioides HOM05D006470 ORTHO05D007978 9.4e-36 155.6 182 47.8
CDE08G1533 Ceratophyllum demersum HOM05D006470 ORTHO05D007978 2.1e-35 154.5 202 44.1
ECA248G1135 Erigeron canadensis HOM05D006470 ORTHO05D007978 4.7e-35 153.3 167 48.5
Psat6g062280 Pisum sativum HOM05D006470 ORTHO05D007978 4.7e-35 153.3 477 41.7
VMungo0720G2572 Vigna mungo HOM05D006470 ORTHO05D007978 8.0e-35 152.5 189 45.5
Sopen09g028440 Solanum pennellii HOM05D006470 ORTHO05D007978 1.0e-34 152.1 175 46.3
Solyc09g072630.3 Solanum lycopersicum HOM05D006470 ORTHO05D007978 1.8e-34 151.4 175 45.7
CAN.G1251.2 Capsicum annuum HOM05D006470 ORTHO05D007978 4.4e-33 146.7 152 48.0
CAN.G1868.1 Capsicum annuum HOM05D006470 ORTHO05D007978 4.4e-33 146.7 152 48.0
Atru.BG.79.p Acer truncatum HOM05D006470 ORTHO05D007978 9.8e-33 145.6 326 54.3
Psat6g062240 Pisum sativum HOM05D006470 ORTHO05D007978 4.8e-32 143.3 193 40.4
Oeu052037.1 Olea europaea HOM05D006470 ORTHO05D007978 4.2e-28 130.2 155 42.6
Glyma.13G125201 Glycine max HOM05D006470 ORTHO05D007978 1.6e-27 128.3 149 48.3
Psat6g063200 Pisum sativum HOM05D006470 ORTHO05D007978 6.8e-26 122.9 192 37.0
HPP92_012855 Vanilla planifolia HOM05D006470 ORTHO05D007978 1.2e-25 122.1 158 38.0
ATR0736G105 Amborella trichopoda HOM05D006470 ORTHO05D007978 7.5e-25 119.4 162 37.7
SEGI_23933 Sequoiadendron giganteum HOM05D006470 ORTHO05D007978 1.8e-23 114.8 176 37.5
ATR0681G334 Amborella trichopoda HOM05D006470 ORTHO05D007978 5.9e-22 109.8 162 40.1
Nn3g19710 Nelumbo nucifera HOM05D006470 ORTHO05D007978 1.0e-21 109.0 434 41.9
unitig_0.g163 Utricularia gibba HOM05D006470 ORTHO05D007978 1.0e-21 109.0 102 49.0
Actinidia30147 Actinidia chinensis HOM05D006470 ORTHO05D007978 1.1e-20 105.5 98 57.1
CDE02G3387 Ceratophyllum demersum HOM05D006470 ORTHO05D007978 1.5e-20 105.1 182 33.5
SMO358G0434 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 1.9e-20 104.8 151 36.4
SMO118G0043 Selaginella moellendorffii HOM05D006470 ORTHO05D007978 3.3e-20 104.0 162 36.4
Os06g0627500 Oryza sativa ssp. japonica HOM05D006470 ORTHO05D007978 1.0e-18 99.0 167 35.9
Hma1.2p1_0273F.1_g109440 Hydrangea macrophylla HOM05D006470 ORTHO05D007978 5.2e-18 96.7 403 22.3
AUR62008754 Chenopodium quinoa HOM05D006470 ORTHO05D007978 1.9e-15 88.2 294 50.7
SMO146G0184 Selaginella moellendorffii HOM05D003233 ORTHO05D007978 2.0e-14 84.7 173 34.1
Medtr1g069665 Medicago truncatula HOM05D006470 ORTHO05D007978 3.6e-11 73.9 167 31.7
Nn1g02880 Nelumbo nucifera HOM05D006470 ORTHO05D007978 1.1e-10 72.4 285 47.7
Oeu039680.1 Olea europaea HOM05D006470 ORTHO05D007978 5.8e-09 66.6 151 30.5
A06p08520 Brassica napus HOM05D003233 ORTHO05D003694 1.7e-08 65.1 188 28.7
BraA06t24047Z Brassica rapa HOM05D003233 ORTHO05D003694 1.7e-08 65.1 188 28.7
arahy.Tifrunner.gnm1.ann1.9HLX1I Arachis hypogaea HOM05D007391 ORTHO05D009446 1.1e-07 62.4 166 31.3
arahy.Tifrunner.gnm1.ann1.QTUK9J Arachis hypogaea HOM05D007391 ORTHO05D009446 1.1e-07 62.4 166 31.3
Pp3c23_19100 Physcomitrium patens HOM05D006470 ORTHO05D004210 1.9e-07 61.6 158 27.2
CDE02G2129 Ceratophyllum demersum HOM05D007391 ORTHO05D009446 2.4e-07 61.2 180 28.9
AagrBONN_evm.TU.Sc2ySwM_344.1086 Anthoceros agrestis HOM05D007391 ORTHO05D004210 5.4e-07 60.1 177 27.7
Mapoly0066s0046 Marchantia polymorpha HOM05D006470 ORTHO05D007978 5.4e-07 60.1 155 25.8
SalBow6G7005 Salvia bowleyana HOM05D007391 ORTHO05D009446 7.0e-07 59.7 190 30.0
SalBow6G6709 Salvia bowleyana HOM05D007391 ORTHO05D009446 1.2e-06 58.9 190 29.5
SMO339G0042 Selaginella moellendorffii HOM05D007391 ORTHO05D009446 1.2e-06 58.9 97 33.0
Ca_01054_v3 Cicer arietinum L. HOM05D000085 ORTHO05D001615 2.1e-06 58.2 162 31.5


User provided reference genes

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