Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012793.2 Cucumis melo HOM05D007427 ORTHO05D006413 8.6e-31 137.1 118 100.0
CsaV3_3G039490 Cucumis sativus L. HOM05D007427 ORTHO05D006413 2.8e-21 105.5 121 87.6
ClCG07G001700 Citrullus lanatus HOM05D040734 ORTHO05D006413 3.9e-15 85.1 59 76.3
Sed0024987 Sechium edule HOM05D040734 ORTHO05D006413 9.9e-11 70.5 57 70.2
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 4.9e-10 68.2 52 61.5
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 7.1e-09 64.3 55 56.4
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.6e-08 63.2 54 63.0
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.6e-08 63.2 53 64.2
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 2.1e-08 62.8 75 52.0
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 4.6e-08 61.6 85 44.7
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 1.0e-07 60.5 54 55.6
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 1.0e-07 60.5 55 60.0
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.8e-07 59.7 54 61.1
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 2.3e-07 59.3 54 57.4
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 3.0e-07 58.9 63 52.4
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 3.0e-07 58.9 52 57.7
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 3.9e-07 58.5 53 56.6
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 3.9e-07 58.5 54 55.6
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 6.7e-07 57.8 40 70.0
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 6.7e-07 57.8 67 50.7
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 8.7e-07 57.4 58 55.2
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 8.7e-07 57.4 51 56.9
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 8.7e-07 57.4 51 56.9
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 1.1e-06 57.0 49 59.2
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.1e-06 57.0 61 54.1
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.1e-06 57.0 61 54.1
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 1.1e-06 57.0 61 54.1
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 1.5e-06 56.6 52 53.8
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 1.5e-06 56.6 51 52.9
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 1.9e-06 56.2 56 53.6
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 1.9e-06 56.2 53 52.8
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 2.5e-06 55.8 75 49.3
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 2.5e-06 55.8 51 56.9
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.5e-06 55.8 56 51.8
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 2.5e-06 55.8 64 48.4
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 3.3e-06 55.5 53 54.7
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 3.3e-06 55.5 58 53.4
ClCG09G009270 Citrullus lanatus HOM05D007427 ORTHO05D006413 5.6e-06 54.7 54 53.7
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 5.6e-06 54.7 54 53.7
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 5.6e-06 54.7 54 50.0
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 7.4e-06 54.3 54 53.7
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 9.6e-06 53.9 54 53.7
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 9.6e-06 53.9 71 46.5
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 9.6e-06 53.9 71 47.9


User provided reference genes

Program Settings