Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 3.2e-82 308.5 175 100.0
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.3e-75 286.6 180 90.0
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 8.3e-46 187.6 230 57.4
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 5.6e-42 174.9 183 55.2
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.6e-41 173.3 182 59.3
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 4.7e-41 171.8 187 56.1
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 3.0e-40 169.1 179 54.7
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 4.0e-40 168.7 179 54.7
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 5.2e-40 168.3 148 68.2
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.5e-39 166.8 183 55.7
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 3.4e-39 165.6 180 57.2
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 7.5e-39 164.5 182 54.4
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 9.8e-39 164.1 157 59.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 9.8e-39 164.1 183 50.3
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 3.7e-38 162.2 188 55.3
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 3.7e-38 162.2 177 53.7
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 1.4e-37 160.2 179 59.8
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 2.4e-37 159.5 183 47.5
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 2.0e-36 156.4 183 52.5
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 3.5e-36 155.6 152 56.6
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 3.5e-36 155.6 194 49.5
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 4.6e-36 155.2 158 57.6
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 7.8e-36 154.5 99 81.8
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 7.8e-36 154.5 176 50.0
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 1.0e-35 154.1 176 49.4
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.0e-35 154.1 185 52.4
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.3e-35 152.9 176 49.4
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.9e-35 152.5 149 54.4
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 3.9e-35 152.1 154 58.4
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 3.9e-35 152.1 166 54.2
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 5.0e-35 151.8 175 48.6
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 6.6e-35 151.4 177 52.0
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 8.6e-35 151.0 183 52.5
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.5e-34 150.2 182 52.7
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 2.5e-34 149.4 149 53.7
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 4.3e-34 148.7 182 56.0
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 5.6e-34 148.3 182 48.9
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 2.1e-33 146.4 171 59.6
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.6e-33 145.6 176 49.4
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 4.7e-33 145.2 153 56.2
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 6.2e-33 144.8 182 47.8
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 1.8e-32 143.3 154 61.0
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 4.0e-32 142.1 155 51.6
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 4.0e-32 142.1 182 46.7
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 6.8e-32 141.4 152 53.9
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.2e-31 140.6 182 49.5
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 1.2e-31 140.6 180 46.7
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.6e-31 139.4 163 49.7
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 2.6e-31 139.4 208 48.6
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 3.4e-31 139.0 183 47.5
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.4e-31 139.0 193 49.2
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 5.8e-31 138.3 116 73.3
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 7.5e-31 137.9 175 48.0
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.3e-30 137.1 161 51.6
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 1.3e-30 137.1 153 54.2
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 1.7e-30 136.7 155 54.2
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 2.2e-30 136.3 185 48.1
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 2.9e-30 136.0 181 46.4
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 3.7e-30 135.6 155 54.2
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 4.9e-30 135.2 186 48.4
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 6.4e-30 134.8 154 61.0
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.1e-29 134.0 149 50.3
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.4e-29 133.7 154 52.6
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 1.9e-29 133.3 183 45.9
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 2.4e-29 132.9 116 74.1
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 4.1e-29 132.1 184 46.7
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 5.4e-29 131.7 183 44.3
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 5.4e-29 131.7 159 59.7
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 7.0e-29 131.3 199 40.7
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 9.2e-29 131.0 185 47.6
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.6e-28 130.2 182 47.3
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 2.7e-28 129.4 156 49.4
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 4.6e-28 128.6 117 59.8
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 6.0e-28 128.3 194 47.4
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 7.8e-28 127.9 159 49.1
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.3e-27 127.1 169 49.1
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.3e-27 127.1 169 49.1
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.3e-27 126.3 162 46.3
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 8.6e-27 124.4 175 44.6
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 1.5e-26 123.6 121 64.5
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 1.9e-26 123.2 136 50.7
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 1.9e-26 123.2 214 40.7
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 1.2e-25 120.6 106 59.4
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 6.2e-25 118.2 116 56.0
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 4.0e-24 115.5 129 53.5
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 5.2e-24 115.2 133 51.9
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 1.2e-23 114.0 106 56.6
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 5.8e-23 111.7 113 54.0
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 7.8e-20 101.3 173 39.9
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 2.5e-18 96.3 133 47.4
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 2.9e-14 82.8 56 73.2
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 6.4e-14 81.6 148 39.9
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 1.6e-12 77.0 56 64.3
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 7.8e-12 74.7 100 51.0
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.6e-09 67.0 55 58.2
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 3.4e-07 59.3 56 48.2
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 4.4e-07 58.9 118 39.0
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 7.6e-07 58.2 142 36.6


User provided reference genes

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