Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 7.9e-103 377.1 188 100.0
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 2.3e-86 322.4 173 91.9
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 4.5e-82 308.1 187 82.9
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 4.1e-43 178.7 131 69.5
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.3e-28 130.6 166 43.4
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 4.1e-27 125.6 178 39.9
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.2e-26 124.0 159 43.4
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 3.5e-26 122.5 118 52.5
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.3e-25 120.6 202 39.1
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.3e-25 119.8 156 44.9
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 2.3e-25 119.8 156 44.9
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 3.9e-25 119.0 168 39.3
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 6.6e-25 118.2 100 53.0
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 8.6e-25 117.9 182 41.8
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 8.6e-25 117.9 152 42.8
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 1.5e-24 117.1 156 39.7
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 2.5e-24 116.3 113 50.4
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.5e-24 116.3 105 51.4
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 3.3e-24 115.9 100 52.0
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 4.3e-24 115.5 183 40.4
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 9.6e-24 114.4 180 37.2
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 1.2e-23 114.0 169 40.2
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.2e-23 114.0 169 39.1
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.2e-23 114.0 169 39.1
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 2.8e-23 112.8 159 41.5
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 4.7e-23 112.1 164 40.2
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 4.7e-23 112.1 164 40.2
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 4.7e-23 112.1 192 35.9
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 6.2e-23 111.7 109 46.8
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 8.1e-23 111.3 112 50.0
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 1.1e-22 110.9 166 39.2
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 1.1e-22 110.9 113 50.4
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 1.4e-22 110.5 135 43.0
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.4e-22 110.5 169 39.1
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 2.4e-22 109.8 130 42.3
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 2.4e-22 109.8 153 43.8
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 2.4e-22 109.8 111 48.6
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 2.4e-22 109.8 185 38.9
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 3.1e-22 109.4 108 51.9
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.1e-22 109.4 174 36.2
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 3.1e-22 109.4 113 49.6
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 3.1e-22 109.4 100 49.0
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 4.0e-22 109.0 123 45.5
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 4.0e-22 109.0 161 41.0
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.2e-22 108.6 169 36.7
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 6.9e-22 108.2 147 39.5
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 6.9e-22 108.2 167 38.3
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 9.0e-22 107.8 155 39.4
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 1.5e-21 107.1 158 41.1
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.5e-21 107.1 153 39.9
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 1.5e-21 107.1 141 40.4
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 1.5e-21 107.1 138 40.6
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 2.0e-21 106.7 161 39.1
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 2.0e-21 106.7 112 50.9
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 2.6e-21 106.3 123 47.2
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 2.6e-21 106.3 123 47.2
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 2.6e-21 106.3 141 40.4
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 2.6e-21 106.3 141 40.4
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 3.4e-21 105.9 166 39.2
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 3.4e-21 105.9 138 44.2
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 4.4e-21 105.5 104 49.0
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 4.4e-21 105.5 173 39.3
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 4.4e-21 105.5 178 37.6
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 5.8e-21 105.1 108 49.1
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 1.3e-20 104.0 163 40.5
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 2.9e-20 102.8 92 47.8
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 3.8e-20 102.4 110 50.0
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 4.9e-20 102.1 145 42.8
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 4.9e-20 102.1 89 51.7
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 1.4e-19 100.5 113 45.1
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 1.9e-19 100.1 156 40.4
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 1.9e-19 100.1 114 43.0
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 7.1e-19 98.2 103 42.7
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 1.2e-18 97.4 97 51.5
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 2.7e-18 96.3 88 51.1
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 3.5e-18 95.9 148 37.2
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 3.5e-18 95.9 90 46.7
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 4.6e-18 95.5 150 39.3
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 7.8e-18 94.7 99 44.4
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 3.9e-17 92.4 167 36.5
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 3.9e-17 92.4 97 46.4
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 3.9e-17 92.4 106 45.3
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 5.1e-17 92.0 105 48.6
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 6.6e-17 91.7 107 40.2
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.5e-16 90.5 84 51.2
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 1.9e-16 90.1 127 41.7
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 3.3e-16 89.4 127 41.7
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 5.6e-16 88.6 110 44.5
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 5.6e-16 88.6 139 41.0
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.3e-15 87.4 112 42.9
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 3.6e-15 85.9 98 44.9
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 6.2e-15 85.1 104 43.3
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 1.8e-14 83.6 103 37.9
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 2.9e-12 76.3 127 34.6
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 9.3e-11 71.2 144 32.6
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 3.9e-09 65.9 66 45.5
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 1.6e-07 60.5 57 47.4
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.1e-06 57.8 67 44.8
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 1.8e-06 57.0 48 50.0
Zm00001eb408970 Zea mays HOM05D032292 ORTHO05D009025 9.0e-06 54.7 138 34.1


User provided reference genes

Program Settings