Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.1e-110 403.3 207 100.0
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 6.0e-104 380.9 207 93.7
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.5e-94 349.7 207 87.4
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 5.1e-79 298.1 223 72.2
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 6.3e-69 264.6 211 69.2
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.3e-66 256.9 211 67.8
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 1.3e-66 256.9 210 67.1
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 4.4e-62 241.9 210 64.3
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.7e-61 240.0 211 64.5
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.1e-60 237.3 208 62.5
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 3.1e-60 235.7 183 69.9
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.7e-59 232.6 213 62.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 4.5e-59 231.9 183 67.8
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 5.9e-59 231.5 179 70.4
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 7.7e-59 231.1 206 64.6
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.0e-58 230.7 212 60.8
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 1.7e-58 229.9 177 70.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.2e-58 229.6 196 63.8
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.9e-57 226.5 182 67.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.9e-57 226.5 204 62.3
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.9e-57 226.5 183 67.2
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 9.4e-57 224.2 182 68.1
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.2e-56 223.8 208 60.1
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.6e-56 223.4 207 60.4
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 6.1e-56 221.5 204 60.8
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 8.0e-56 221.1 209 59.8
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 8.0e-56 221.1 211 61.1
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.4e-55 220.3 207 59.9
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.4e-55 220.3 214 60.7
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.8e-55 219.9 186 66.1
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 3.0e-55 219.2 211 60.7
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 4.0e-55 218.8 210 59.0
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 5.2e-55 218.4 210 58.6
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 5.2e-55 218.4 210 59.5
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 8.8e-55 217.6 212 56.6
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.5e-54 216.9 214 60.7
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 2.6e-54 216.1 186 64.5
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 3.4e-54 215.7 238 54.6
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 4.4e-54 215.3 214 58.9
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 5.7e-54 214.9 183 65.0
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 5.7e-54 214.9 208 57.7
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 7.5e-54 214.5 211 61.1
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 9.8e-54 214.2 183 64.5
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 9.8e-54 214.2 211 60.2
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 9.8e-54 214.2 214 59.3
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 2.8e-53 212.6 210 58.6
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 3.7e-53 212.2 206 59.7
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 8.3e-53 211.1 209 57.4
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.3e-53 211.1 209 57.4
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-52 210.7 211 58.8
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.1e-52 210.7 210 58.1
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 3.1e-52 209.1 166 65.1
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 3.1e-52 209.1 171 65.5
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.2e-51 207.2 202 58.4
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.2e-51 207.2 179 63.1
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 1.6e-51 206.8 211 57.3
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 2.0e-51 206.5 207 55.6
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 2.7e-51 206.1 199 60.8
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 2.7e-51 206.1 210 58.1
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 3.5e-51 205.7 208 58.2
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 5.9e-51 204.9 208 56.7
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 7.7e-51 204.5 208 57.7
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.0e-50 204.1 179 62.6
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 1.3e-50 203.8 208 56.2
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 1.7e-50 203.4 158 67.1
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 2.3e-50 203.0 210 57.6
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.9e-50 202.6 172 64.0
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 6.5e-50 201.4 208 57.2
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.1e-49 200.7 204 57.4
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 3.3e-49 199.1 207 55.1
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 7.2e-49 198.0 185 61.1
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 7.2e-49 198.0 164 65.2
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 2.1e-48 196.4 173 61.8
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 2.1e-48 196.4 157 66.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 2.8e-48 196.1 157 66.9
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.8e-48 196.1 164 63.4
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 4.7e-48 195.3 157 66.2
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 8.0e-48 194.5 173 61.3
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 8.0e-48 194.5 165 65.5
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.4e-47 193.7 151 65.6
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 3.0e-47 192.6 157 65.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 4.0e-47 192.2 157 65.6
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 5.2e-47 191.8 155 66.5
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.2e-47 191.8 165 62.4
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 6.8e-47 191.4 171 60.8
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 1.2e-46 190.7 128 75.0
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.5e-46 190.3 128 74.2
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 2.0e-46 189.9 144 68.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 3.4e-46 189.1 179 58.7
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 7.5e-46 188.0 184 57.1
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.2e-45 186.4 129 73.6
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 3.7e-45 185.7 145 68.3
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.7e-45 185.7 146 66.4
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 6.3e-45 184.9 157 64.3
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.4e-44 183.0 128 72.7
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 5.0e-42 175.3 189 53.4
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 5.0e-42 175.3 166 57.8
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.5e-41 172.9 211 53.1
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 2.3e-39 166.4 128 70.3
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.0e-35 153.3 191 44.5
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.3e-34 150.6 101 76.2
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 3.6e-32 142.5 205 42.9
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.0e-30 136.7 133 57.9
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 3.4e-30 136.0 139 51.1
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 4.1e-28 129.0 142 46.5
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 2.5e-25 119.8 126 50.8
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 9.5e-25 117.9 115 57.4
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.3e-18 97.4 70 71.4
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 4.7e-16 89.0 120 42.5
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 5.8e-06 55.5 102 31.4


User provided reference genes

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