Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.5e-98 362.8 179 100.0
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.8e-65 252.3 142 89.4
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.1e-64 250.4 142 88.0
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 7.1e-61 237.7 150 81.3
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 1.6e-57 226.5 142 82.4
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.5e-55 219.9 149 73.2
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.5e-53 212.6 149 71.1
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 4.2e-53 211.8 141 72.3
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.5e-53 211.5 141 72.3
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 9.3e-53 210.7 149 69.8
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 3.5e-52 208.8 149 69.1
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.5e-52 208.8 141 67.4
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 4.6e-52 208.4 141 73.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.0e-51 207.2 141 70.9
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.3e-51 206.8 149 69.1
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.3e-51 206.8 141 70.9
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.3e-51 206.8 141 71.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.8e-51 206.5 141 70.9
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.8e-51 206.5 141 70.9
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 2.3e-51 206.1 141 70.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.3e-51 206.1 141 70.2
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 2.3e-51 206.1 149 69.8
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.3e-51 206.1 141 70.2
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.0e-51 205.7 141 70.9
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 3.9e-51 205.3 141 70.9
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 6.7e-51 204.5 141 68.1
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 6.7e-51 204.5 141 70.2
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.7e-51 204.5 141 67.4
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.1e-50 203.8 141 70.2
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 1.1e-50 203.8 149 67.1
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.5e-50 203.4 141 66.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.9e-50 203.0 141 69.5
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.9e-50 203.0 149 67.8
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.9e-50 203.0 149 68.5
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.9e-50 203.0 141 69.5
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.5e-50 202.6 149 65.8
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.5e-50 202.6 149 65.8
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.5e-50 202.6 141 68.1
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.3e-50 202.2 141 68.8
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.3e-50 202.2 141 68.8
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.3e-50 202.2 141 68.8
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 7.4e-50 201.1 141 68.8
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 9.7e-50 200.7 141 68.8
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.3e-49 200.3 141 68.8
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.6e-49 199.9 149 66.4
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.2e-49 199.5 141 68.1
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.2e-49 199.5 141 68.1
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 2.8e-49 199.1 141 68.1
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 3.7e-49 198.7 141 68.1
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 3.7e-49 198.7 141 65.2
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 3.7e-49 198.7 141 67.4
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 4.8e-49 198.4 143 68.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 4.8e-49 198.4 149 64.4
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.1e-48 197.2 141 66.7
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.4e-48 196.1 141 66.0
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 3.1e-48 195.7 141 64.5
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 5.3e-48 194.9 149 63.1
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.9e-48 194.5 149 67.1
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.2e-47 193.7 149 65.1
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.5e-47 193.4 149 65.1
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.4e-47 192.2 141 64.5
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.7e-46 189.9 141 64.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.7e-46 189.9 141 63.1
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.7e-46 189.9 141 64.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.7e-46 189.9 141 64.5
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.7e-46 189.9 141 65.2
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.2e-46 189.5 141 64.5
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.2e-46 189.5 141 64.5
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 5.0e-46 188.3 141 63.1
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 6.5e-46 188.0 141 63.1
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 8.5e-46 187.6 141 63.1
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.1e-45 187.2 141 62.4
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.4e-45 186.8 114 74.6
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.4e-45 186.8 141 63.1
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.4e-45 186.8 141 62.4
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.9e-45 186.4 149 61.7
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.5e-45 186.0 174 55.7
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 4.2e-45 185.3 141 63.1
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 4.2e-45 185.3 153 60.1
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 7.2e-45 184.5 168 57.1
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 3.6e-44 182.2 141 62.4
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 6.1e-44 181.4 141 59.6
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 2.3e-43 179.5 149 60.4
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 5.1e-43 178.3 141 61.0
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.0e-42 176.4 141 61.0
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.1e-40 169.1 141 61.0
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.3e-38 163.7 114 67.5
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 6.5e-38 161.4 125 64.0
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 8.5e-38 161.0 125 63.2
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 9.4e-37 157.5 165 50.3
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.1e-36 156.4 166 48.8
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 7.9e-36 154.5 163 49.7
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.4e-35 153.7 153 52.3
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.9e-35 152.1 161 50.9
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.4e-34 148.7 151 47.7
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 9.1e-32 141.0 100 68.0
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.7e-30 136.7 114 57.9
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.5e-30 134.8 152 48.0
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.1e-29 134.0 124 54.0
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 9.4e-29 131.0 129 56.6
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.3e-27 126.3 79 68.4
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 3.0e-27 125.9 128 52.3
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 1.5e-26 123.6 79 73.4
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 4.2e-13 79.0 137 38.7
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 7.5e-10 68.2 43 65.1
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 2.4e-08 63.2 63 52.4
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 5.4e-08 62.0 45 57.8
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.6e-07 60.5 94 42.6
MELO3C032976.2 Cucumis melo HOM05D007308 ORTHO05D170395 2.3e-06 56.6 76 50.0
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.0e-06 55.5 41 56.1


User provided reference genes

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