Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.5e-189 666.0 340 100.0
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.5e-184 649.4 340 97.6
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 2.0e-160 569.3 341 86.5
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.2e-133 480.3 337 71.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.0e-133 479.6 341 72.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 4.6e-133 478.4 337 71.8
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.8e-129 466.5 332 70.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.1e-129 465.7 332 70.2
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.0e-129 465.3 338 72.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.0e-129 465.3 338 70.1
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 6.8e-129 464.5 337 70.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.2e-128 463.8 337 70.3
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-128 463.4 338 69.8
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.0e-128 463.0 331 70.4
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.0e-128 463.0 326 70.9
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.8e-128 461.5 336 70.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 5.8e-128 461.5 282 80.1
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.3e-127 460.3 347 67.1
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.7e-127 459.9 333 69.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.9e-127 459.1 395 63.3
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 3.7e-127 458.8 335 71.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.4e-127 458.0 339 70.2
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 6.4e-127 458.0 338 69.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.4e-126 456.8 348 66.4
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.4e-126 454.9 341 69.2
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.4e-126 454.9 333 69.4
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 7.1e-126 454.5 348 65.8
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.6e-125 453.4 287 74.2
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 2.7e-125 452.6 339 68.4
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 4.6e-125 451.8 282 75.2
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 4.6e-125 451.8 341 68.9
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 6.0e-125 451.4 345 67.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 7.8e-125 451.1 338 67.2
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 1.0e-124 450.7 343 68.2
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.3e-124 450.3 348 68.7
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 3.9e-124 448.7 329 68.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 5.1e-124 448.4 334 68.0
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 6.6e-124 448.0 342 67.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 8.6e-124 447.6 292 73.3
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 8.6e-124 447.6 338 68.0
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 8.6e-124 447.6 325 69.5
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.1e-123 447.2 326 69.0
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.5e-123 446.8 331 69.8
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 4.3e-123 445.3 337 69.7
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.6e-122 443.4 310 73.5
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.6e-122 443.4 335 67.8
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.8e-121 439.9 296 72.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.2e-121 438.3 323 69.3
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 6.8e-121 438.0 329 69.3
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 6.8e-121 438.0 310 73.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 8.9e-121 437.6 295 72.9
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 8.9e-121 437.6 299 71.6
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.2e-120 437.2 295 72.9
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.2e-120 437.2 328 68.6
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.5e-120 436.8 323 68.7
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 2.0e-120 436.4 295 72.9
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.8e-120 434.9 336 64.0
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 5.8e-120 434.9 340 65.0
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 9.9e-120 434.1 308 71.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.3e-119 433.7 323 68.7
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.3e-119 433.7 328 67.7
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.7e-119 432.2 344 65.4
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 4.9e-119 431.8 328 68.0
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 8.3e-119 431.0 256 80.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.1e-118 428.7 262 77.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 5.4e-118 428.3 350 64.0
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 7.1e-118 427.9 318 67.3
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 6.0e-117 424.9 262 77.1
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.3e-116 422.9 337 67.4
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.3e-116 422.9 288 68.8
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 3.9e-116 422.2 335 64.2
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 6.6e-116 421.4 299 69.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-115 420.6 283 70.7
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.5e-115 420.2 337 65.6
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 2.5e-115 419.5 310 68.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 5.6e-115 418.3 328 65.9
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.3e-115 417.9 363 62.5
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.1e-114 416.4 286 70.3
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.8e-114 416.0 345 65.8
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.8e-114 416.0 317 66.2
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 4.7e-114 415.2 307 69.4
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.9e-110 403.3 340 60.9
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 9.3e-110 401.0 280 71.4
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 6.0e-109 398.3 296 68.6
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.1e-106 389.8 321 62.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.8e-106 389.4 310 65.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.4e-105 387.1 336 60.4
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.1e-105 386.0 333 60.7
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 6.9e-105 384.8 444 49.3
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.2e-103 379.8 243 75.7
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 6.0e-101 371.7 310 62.3
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.3e-100 369.8 310 62.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.7e-92 341.3 318 59.1
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.0e-88 330.1 336 56.2
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.7e-87 327.0 309 52.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 4.9e-87 325.5 322 54.7
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.1e-85 320.1 333 48.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 7.4e-83 311.6 271 59.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 3.2e-78 296.2 256 55.5
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.2e-77 294.3 278 56.5
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.9e-76 289.3 334 44.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.1e-69 266.9 157 75.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 7.4e-67 258.5 201 66.7
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.8e-66 255.8 153 79.7
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.7e-58 229.6 163 71.2
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 2.9e-55 219.9 134 78.4
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 6.5e-55 218.8 267 44.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.2e-53 214.5 135 75.6
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.0e-48 197.2 284 41.2
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.6e-45 186.4 134 62.7
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.7e-37 160.2 97 78.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.9e-31 140.2 292 35.6
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.6e-29 134.4 317 29.0
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.1e-29 134.0 334 30.8
ClCG05G022980 Citrullus lanatus HOM05D004993 ORTHO05D008532 6.1e-29 132.5 83 86.7
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.1e-14 85.1 99 48.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 7.3e-14 82.4 78 48.7
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.4e-09 66.2 54 51.9


User provided reference genes

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