Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 4.6e-261 904.0 462 100.0
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.3e-236 822.0 469 91.3
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.9e-215 751.9 502 80.3
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 5.0e-199 698.0 472 78.6
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 2.3e-151 539.7 460 61.5
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 1.7e-146 523.5 441 62.4
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 3.2e-145 519.2 469 60.1
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 3.2e-145 519.2 469 60.1
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 4.1e-145 518.8 441 61.0
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.6e-144 516.9 472 59.7
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.7e-144 516.2 427 62.8
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.9e-143 512.3 428 62.4
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 3.9e-143 512.3 446 61.0
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.1e-142 510.8 429 62.9
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 7.3e-142 508.1 440 59.5
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.6e-141 506.9 475 57.5
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 2.8e-141 506.1 469 59.1
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 3.6e-141 505.8 450 60.0
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 2.3e-140 503.1 469 58.0
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 5.2e-140 501.9 459 58.8
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 3.4e-139 499.2 482 56.0
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 7.6e-139 498.0 472 57.0
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 4.9e-138 495.4 451 58.8
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.4e-138 495.0 451 59.2
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 8.4e-138 494.6 422 62.8
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.1e-137 494.2 451 57.0
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.4e-137 493.0 451 59.2
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 2.4e-137 493.0 425 62.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 5.4e-137 491.9 463 57.5
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.7e-136 489.6 435 60.2
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 6.0e-136 488.4 467 56.3
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 7.8e-136 488.0 456 57.7
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.3e-135 487.3 467 56.1
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-135 486.9 427 60.4
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.7e-135 486.9 448 58.9
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 3.0e-135 486.1 437 58.8
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 3.9e-135 485.7 468 55.6
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 8.6e-135 484.6 424 59.9
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 1.9e-134 483.4 426 59.2
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 3.3e-134 482.6 437 57.7
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 5.6e-134 481.9 448 57.6
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 5.6e-134 481.9 449 57.5
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 1.2e-133 480.7 466 56.0
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 1.2e-133 480.7 470 56.0
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 2.8e-133 479.6 448 56.9
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.8e-133 479.6 438 58.2
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 6.2e-133 478.4 446 58.1
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 3.1e-132 476.1 469 55.7
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 8.9e-132 474.6 425 60.2
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.6e-131 473.0 425 58.8
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.2e-130 469.9 426 59.2
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 8.4e-130 468.0 478 54.4
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 2.4e-129 466.5 473 54.3
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 4.2e-129 465.7 465 54.6
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 9.3e-129 464.5 462 56.5
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.6e-128 463.8 473 53.9
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 6.0e-128 461.8 477 54.3
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.3e-127 459.9 464 54.7
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 2.3e-127 459.9 432 57.4
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 3.0e-127 459.5 467 55.2
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 3.9e-127 459.1 478 54.8
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 3.3e-126 456.1 431 57.5
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.3e-126 455.7 452 56.2
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 4.3e-126 455.7 399 60.2
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 5.6e-126 455.3 440 55.9
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 5.6e-126 455.3 396 60.4
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 7.3e-126 454.9 440 55.7
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 7.3e-126 454.9 471 54.4
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 1.6e-125 453.8 473 55.0
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 3.6e-125 452.6 477 53.9
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 2.2e-122 443.4 475 50.5
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 6.4e-122 441.8 373 62.5
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 8.4e-122 441.4 425 54.4
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 4.2e-121 439.1 441 54.6
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 7.1e-121 438.3 434 55.8
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 3.9e-119 432.6 415 55.2
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 2.1e-117 426.8 429 55.0
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.2e-115 421.0 396 56.6
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 3.4e-115 419.5 427 54.3
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.2e-113 412.5 430 53.3
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.6e-112 410.6 463 51.6
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 6.9e-108 395.2 420 50.7
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 2.5e-105 386.7 351 59.3
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 1.6e-104 384.0 352 59.4
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 4.6e-104 382.5 382 52.6
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 8.7e-103 378.3 350 57.7
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.8e-100 370.5 348 57.8
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 4.5e-99 365.9 377 51.5
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 3.1e-92 343.2 303 59.1
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 9.1e-92 341.7 423 43.7
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.2e-91 341.3 303 60.7
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.7e-90 337.4 401 48.4
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.4e-89 334.3 391 46.8
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 4.4e-86 322.8 303 57.1
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.7e-85 320.9 430 42.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 4.8e-85 319.3 463 40.2
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.0e-83 313.9 323 55.4
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.9e-82 310.1 323 55.1
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.4e-81 307.8 244 64.3
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 6.1e-80 302.4 444 39.9
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 1.1e-78 298.1 346 48.6
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 1.0e-66 258.5 240 56.2
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 3.7e-45 186.8 175 53.7
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.4e-44 184.9 156 60.3
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.2e-44 182.2 255 42.4
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 3.0e-42 177.2 175 54.3
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.4e-39 168.3 153 53.6
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 6.0e-35 152.9 144 49.3
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.8e-35 152.5 158 56.3
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.3e-29 135.2 96 66.7
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 6.8e-23 112.8 99 60.6
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.6e-22 109.4 96 56.2
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.4e-20 105.1 103 57.3
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.2e-19 102.1 134 48.5
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.6e-16 91.7 110 44.5
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.2e-08 63.2 50 56.0


User provided reference genes

Program Settings