Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C012102.2 Cucumis melo HOM05D005738 ORTHO05D007135 1.5e-121 439.5 215 100.0
ClCG05G024220 Citrullus lanatus HOM05D005738 ORTHO05D007135 1.0e-74 283.9 280 58.2
CsaV3_5G032760 Cucumis sativus L. HOM05D005738 ORTHO05D007135 2.0e-62 243.0 153 83.0
Sed0019595 Sechium edule HOM05D005738 ORTHO05D007135 3.4e-57 225.7 153 75.8
Haze_12004 Corylus avellana HOM05D005738 ORTHO05D007135 2.0e-41 173.3 153 58.2
Cc00_g25960 Coffea canephora HOM05D005738 ORTHO05D007135 3.4e-41 172.6 156 60.3
CiPaw.05G134200 Carya illinoinensis HOM05D005738 ORTHO05D007135 4.4e-41 172.2 153 58.8
Cfa008972 Carpinus fangiana HOM05D005738 ORTHO05D007135 7.5e-41 171.4 153 58.8
Duzib251G0762 Durio zibethinus HOM05D005738 ORTHO05D007135 7.5e-41 171.4 149 60.4
Actinidia31900 Actinidia chinensis HOM05D005738 ORTHO05D007135 2.2e-40 169.9 140 61.4
Oeu055111.1 Olea europaea HOM05D005738 ORTHO05D007135 3.7e-40 169.1 143 62.2
RcHm_v2.0_Chr4g0439701 Rosa chinensis HOM05D005738 ORTHO05D007135 1.1e-39 167.5 161 56.5
FAN22G1556 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.9e-39 166.8 161 56.5
QL03p068731 Quercus lobata HOM05D005738 ORTHO05D007135 1.9e-39 166.8 156 59.0
Thecc.02G344900 Theobroma cacao HOM05D005738 ORTHO05D007135 1.9e-39 166.8 148 58.8
Lj2g0006642 Lotus japonicus HOM05D005738 ORTHO05D007135 2.4e-39 166.4 153 56.9
RcHm_v2.0_Chr6g0288631 Rosa chinensis HOM05D005738 ORTHO05D007135 2.4e-39 166.4 162 56.2
TPR.G39224 Trifolium pratense HOM05D005738 ORTHO05D007135 3.2e-39 166.0 153 58.8
Cc01_g00500 Coffea canephora HOM05D005738 ORTHO05D007135 4.1e-39 165.6 156 58.3
Psat2g119200 Pisum sativum HOM05D005738 ORTHO05D007135 4.1e-39 165.6 165 54.5
FAN07G1335 Fragaria x ananassa HOM05D005738 ORTHO05D007135 5.4e-39 165.2 161 55.9
MSTRG.706 Avicennia marina HOM05D005738 ORTHO05D007135 7.1e-39 164.9 130 65.4
Cpa.g.sc128.36 Carica papaya HOM05D005738 ORTHO05D007135 9.2e-39 164.5 149 57.7
MD16G1072000 Malus domestica HOM05D005738 ORTHO05D007135 9.2e-39 164.5 161 55.3
GSVIVG01023016001 Vitis vinifera HOM05D005738 ORTHO05D007135 9.2e-39 164.5 149 59.1
FAN17G0023 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.7e-38 162.9 150 58.0
Gohir.A12G164500 Gossypium hirsutum HOM05D005738 ORTHO05D007135 4.6e-38 162.2 141 59.6
PGSC0003DMG400018425 Solanum tuberosum HOM05D005738 ORTHO05D007135 4.6e-38 162.2 156 57.1
Gorai.008G180500 Gossypium raimondii HOM05D005738 ORTHO05D007135 6.0e-38 161.8 141 59.6
Hma1.2p1_0795F.1_g218920 Hydrangea macrophylla HOM05D005738 ORTHO05D007135 6.0e-38 161.8 137 62.0
Eucgr.B03215 Eucalyptus grandis HOM05D005738 ORTHO05D007135 1.3e-37 160.6 152 58.6
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.3e-37 160.6 175 51.4
Gohir.D12G167600 Gossypium hirsutum HOM05D005738 ORTHO05D007135 1.3e-37 160.6 154 55.8
CSS0032710 Camellia sinensis var. sinensis HOM05D005738 ORTHO05D007135 1.7e-37 160.2 147 56.5
Cc00_g24810 Coffea canephora HOM05D005738 ORTHO05D007135 3.9e-37 159.1 156 56.4
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 3.9e-37 159.1 175 51.4
Solyc05g007910.3 Solanum lycopersicum HOM05D005738 ORTHO05D007135 3.9e-37 159.1 142 59.2
Ciclev10032918m.g Citrus clementina HOM05D005738 ORTHO05D007135 5.1e-37 158.7 152 57.2
FvH4_5g23030 Fragaria vesca HOM05D005738 ORTHO05D007135 5.1e-37 158.7 161 54.0
Aqoxy3G03402 Aquilegia oxysepala HOM05D005738 ORTHO05D007135 6.6e-37 158.3 148 58.8
Cc01_g02300 Coffea canephora HOM05D005738 ORTHO05D007135 6.6e-37 158.3 194 49.0
Medtr5g041290 Medicago truncatula HOM05D005738 ORTHO05D007135 1.1e-36 157.5 157 55.4
Potri.008G087100 Populus trichocarpa HOM05D005738 ORTHO05D007135 1.1e-36 157.5 161 54.0
Lsat_1_v5_gn_4_145980 Lactuca sativa HOM05D005738 ORTHO05D007135 1.9e-36 156.8 143 58.7
Migut.L01281 Erythranthe guttata HOM05D005738 ORTHO05D007135 2.5e-36 156.4 128 65.6
MBI05_g34363_MAGBIO Magnolia biondii HOM05D005738 ORTHO05D007135 3.3e-36 156.0 129 64.3
CANSAT64G2506 Cannabis sativa HOM05D005738 ORTHO05D007135 4.3e-36 155.6 142 58.5
FvH4_4g31280 Fragaria vesca HOM05D005738 ORTHO05D007135 4.3e-36 155.6 161 53.4
PGR102G3221 Punica granatum HOM05D005738 ORTHO05D007135 4.3e-36 155.6 134 62.7
HanXRQChr09g0256931 Helianthus annuus HOM05D005738 ORTHO05D007135 5.6e-36 155.2 130 63.1
PSO339G5942 Papaver somniferum HOM05D005738 ORTHO05D007135 7.3e-36 154.8 132 63.6
SGA_v2.0_scaffold31G12777 Striga asiatica HOM05D005738 ORTHO05D007135 7.3e-36 154.8 130 63.8
VMungo1215G0821 Vigna mungo HOM05D005738 ORTHO05D007135 7.3e-36 154.8 151 56.3
COL.COLO4_22957 Corchorus olitorius HOM05D005738 ORTHO05D007135 1.6e-35 153.7 153 58.2
Nitab4.5_0003950g0020 Nicotiana tabacum HOM05D005738 ORTHO05D007135 1.6e-35 153.7 149 59.1
THA.LOC104801796 Tarenaya hassleriana HOM05D005738 ORTHO05D007135 1.6e-35 153.7 146 56.2
SalBow2G2920 Salvia bowleyana HOM05D005738 ORTHO05D007135 2.1e-35 153.3 149 55.0
Thhalv10008948m.g Eutrema salsugineum HOM05D005738 ORTHO05D007135 3.6e-35 152.5 158 53.2
Lalb_Chr10g0098351 Lupinus albus HOM05D005738 ORTHO05D007135 3.6e-35 152.5 154 54.5
Rhsim12G0064100 Rhododendron simsii HOM05D005738 ORTHO05D007135 6.2e-35 151.8 146 54.1
Sopen05g003760 Solanum pennellii HOM05D005738 ORTHO05D007135 6.2e-35 151.8 142 57.0
CDE04G3278 Ceratophyllum demersum HOM05D005738 ORTHO05D007135 8.1e-35 151.4 153 52.9
ECA232G4216 Erigeron canadensis HOM05D005738 ORTHO05D007135 1.1e-34 151.0 127 63.0
Atru.chr11.1777 Acer truncatum HOM05D005738 ORTHO05D007135 1.8e-34 150.2 147 53.7
ATR0681G265 Amborella trichopoda HOM05D005738 ORTHO05D007135 2.3e-34 149.8 139 58.3
SGA_v2.0_scaffold47G17610 Striga asiatica HOM05D005738 ORTHO05D007135 2.3e-34 149.8 130 61.5
Nitab4.5_0001555g0030 Nicotiana tabacum HOM05D005738 ORTHO05D007135 3.1e-34 149.4 133 61.7
BcaB08g34377 Brassica carinata HOM05D005738 ORTHO05D007135 4.0e-34 149.1 148 56.1
arahy.Tifrunner.gnm1.ann1.YAXL0T Arachis hypogaea HOM05D005738 ORTHO05D007135 5.2e-34 148.7 152 55.3
CAN.G1604.4 Capsicum annuum HOM05D005738 ORTHO05D007135 5.2e-34 148.7 129 63.6
arahy.Tifrunner.gnm1.ann1.L6MMNY Arachis hypogaea HOM05D005738 ORTHO05D007135 6.8e-34 148.3 151 55.6
A09p62360 Brassica napus HOM05D005738 ORTHO05D007135 1.2e-33 147.5 145 55.9
Sp1g12550 Schrenkiella parvula HOM05D005738 ORTHO05D007135 1.5e-33 147.1 134 59.0
unitig_22.g6513 Utricularia gibba HOM05D005738 ORTHO05D007135 2.6e-33 146.4 150 54.7
Peaxi162Scf00222g00523 Petunia axillaris HOM05D005738 ORTHO05D007135 3.4e-33 146.0 147 57.1
BcaC07g41589 Brassica carinata HOM05D005738 ORTHO05D007135 4.4e-33 145.6 145 55.2
FvH4_7g03450 Fragaria vesca HOM05D005738 ORTHO05D007135 4.4e-33 145.6 150 52.7
Glyma.02G108200 Glycine max HOM05D005738 ORTHO05D007135 4.4e-33 145.6 152 55.3
arahy.Tifrunner.gnm1.ann1.M1YF1C Arachis hypogaea HOM05D005738 ORTHO05D007135 5.8e-33 145.2 151 54.3
C08p45920 Brassica napus HOM05D005738 ORTHO05D007135 5.8e-33 145.2 145 54.5
BolC8t52144H Brassica oleracea HOM05D005738 ORTHO05D007135 5.8e-33 145.2 145 54.5
DCAR_007157 Daucus carota HOM05D005738 ORTHO05D007135 5.8e-33 145.2 127 61.4
AL1G26090 Arabidopsis lyrata HOM05D005738 ORTHO05D007135 7.6e-33 144.8 145 53.8
arahy.Tifrunner.gnm1.ann1.C6ZMY5 Arachis hypogaea HOM05D005738 ORTHO05D007135 7.6e-33 144.8 151 54.3
CARHR014620 Cardamine hirsuta HOM05D005738 ORTHO05D007135 2.2e-32 143.3 134 57.5
Sc14g0008110 Simmondsia chinensis HOM05D005738 ORTHO05D007135 2.2e-32 143.3 158 53.2
TWI31G0211 Tripterygium wilfordii HOM05D005738 ORTHO05D007135 2.2e-32 143.3 153 52.3
BraA09t41601Z Brassica rapa HOM05D005738 ORTHO05D007135 2.9e-32 142.9 127 61.4
AT1G14205 Arabidopsis thaliana HOM05D005738 ORTHO05D007135 3.8e-32 142.5 127 60.6
Nitab4.5_0000040g0260 Nicotiana tabacum HOM05D000556 ORTHO05D007135 3.8e-32 142.5 122 62.3
Hund25229 Selenicereus undatus HOM05D005738 ORTHO05D007135 6.4e-32 141.7 134 59.7
FAN24G2090 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.9e-31 140.2 161 49.1
Phvul.003G017400 Phaseolus vulgaris HOM05D005738 ORTHO05D007135 1.9e-31 140.2 152 51.3
FAN22G1611 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.1e-31 139.0 161 49.1
EL10Ac2g03567 Beta vulgaris HOM05D005738 ORTHO05D007135 7.1e-31 138.3 141 54.6
Carub.0001s1389 Capsella rubella HOM05D005738 ORTHO05D007135 1.2e-30 137.5 127 58.3
Dinv34149 Davidia involucrata HOM05D005738 ORTHO05D007135 1.6e-30 137.1 131 58.0
Ca_04813_v3 Cicer arietinum L. HOM05D005738 ORTHO05D007135 2.1e-30 136.7 87 75.9
Cc00_g35260 Coffea canephora HOM05D005738 ORTHO05D007135 6.0e-30 135.2 87 77.0
Lj3A1037T78 Lonicera japonica HOM05D005738 ORTHO05D007135 6.0e-30 135.2 87 75.9
Cc00_g33910 Coffea canephora HOM05D005738 ORTHO05D007135 1.0e-29 134.4 85 76.5
Nn4g23184 Nelumbo nucifera HOM05D005738 ORTHO05D007135 1.7e-29 133.7 87 77.0
Sabra08G0064900 Salix brachista HOM05D005738 ORTHO05D007135 1.7e-29 133.7 210 42.4
HPP92_003355 Vanilla planifolia HOM05D005738 ORTHO05D007399 1.7e-29 133.7 127 56.7
arahy.Tifrunner.gnm1.ann1.NUP0F7 Arachis hypogaea HOM05D005738 ORTHO05D007135 2.3e-29 133.3 142 54.9
Aa31LG1G840 Aethionema arabicum HOM05D005738 ORTHO05D007135 3.0e-29 132.9 132 56.1
AUR62005804 Chenopodium quinoa HOM05D005738 ORTHO05D007135 8.6e-29 131.3 133 55.6
CsaV3_5G032770 Cucumis sativus L. HOM05D005738 ORTHO05D007135 1.5e-28 130.6 75 82.7
Os03g0169400 Oryza sativa ssp. japonica HOM05D005738 ORTHO05D007135 1.9e-28 130.2 123 56.9
FvH4_6g19250 Fragaria vesca HOM05D005738 ORTHO05D007135 9.6e-28 127.9 100 63.0
AUR62032794 Chenopodium quinoa HOM05D005738 ORTHO05D007135 2.1e-27 126.7 133 54.9
FAN13G2547 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.1e-27 126.7 82 73.2
Os09g0439050 Oryza sativa ssp. japonica HOM05D005738 ORTHO05D007135 1.1e-26 124.4 140 50.0
HPP92_003354 Vanilla planifolia HOM05D005738 ORTHO05D007135 1.8e-26 123.6 87 69.0
FAN07G1573 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.0e-26 122.5 87 69.0
vmacro01263 Vaccinium macrocarpon HOM05D005738 ORTHO05D007135 2.9e-24 116.3 100 61.0
Zm00001eb005360 Zea mays HOM05D005738 ORTHO05D007135 1.4e-23 114.0 155 46.5
FAN14G0628 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.4e-23 113.2 92 64.1
FAN08G3274 Fragaria x ananassa HOM05D005738 ORTHO05D007135 1.6e-22 110.5 109 51.4
Cc00_g33980 Coffea canephora HOM05D005738 ORTHO05D007135 3.0e-21 106.3 87 66.7
Zm00001eb402360 Zea mays HOM05D005738 ORTHO05D007135 6.6e-21 105.1 113 56.6
SEGI_26874 Sequoiadendron giganteum HOM05D005738 ORTHO05D007135 1.1e-20 104.4 124 50.0
FAN17G2055 Fragaria x ananassa HOM05D005738 ORTHO05D007135 3.6e-19 99.4 147 43.5
Prupe.1G275600 Prunus persica HOM05D005738 ORTHO05D007135 8.4e-16 88.2 113 46.0
FAN04G0710 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.2e-15 85.9 66 66.7
Manes.05G102100 Manihot esculenta HOM05D005738 ORTHO05D007135 4.8e-11 72.4 89 47.2
Glyma.01G048600 Glycine max HOM05D005738 ORTHO05D007135 8.1e-11 71.6 86 47.7
FvH4_4g31170 Fragaria vesca HOM05D005738 ORTHO05D007135 2.4e-10 70.1 89 47.2
FAN12G3611 Fragaria x ananassa HOM05D005738 ORTHO05D007135 2.4e-10 70.1 89 47.2
Mapoly0060s0071 Marchantia polymorpha HOM05D005495 ORTHO05D006878 2.4e-10 70.1 129 36.4
AagrBONN_evm.TU.Sc2ySwM_368.2340 Anthoceros agrestis HOM05D005495 ORTHO05D006878 9.0e-10 68.2 126 35.7
Medtr5g041280 Medicago truncatula HOM05D005738 ORTHO05D007135 9.0e-10 68.2 66 53.0
CBR_g48702 Chara braunii HOM05D005495 ORTHO05D006878 2.6e-09 66.6 141 33.3
Nn4g23185 Nelumbo nucifera HOM05D005738 ORTHO05D007135 6.0e-06 55.5 67 46.3


User provided reference genes

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