Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011772.2 Cucumis melo HOM05D000533 ORTHO05D001069 1.4e-27 125.6 63 100.0
Lalb_Chr10g0094591 Lupinus albus HOM05D000533 ORTHO05D001069 2.7e-15 84.7 48 85.4
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.0X9YMY Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.4DS86I Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.AFL9HK Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.ETC72T Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.F9JXCN Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.I47HSX Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.LX7XQ5 Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.MFEB25 Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.P9L1XB Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
arahy.Tifrunner.gnm1.ann1.SG2Q82 Arachis hypogaea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BcaC09g49600 Brassica carinata HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BraSC159t45715Z Brassica rapa HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
BraSC48t46307Z Brassica rapa HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Cpa.g.sc263.13 Carica papaya HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Ca_26704_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Ca_26706_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
CsaV3_UNG208520 Cucumis sativus L. HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Lalb_Chr00c24g0407301 Lupinus albus HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Lalb_Chr00c54g0413531 Lupinus albus HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 7.9e-15 83.2 48 83.3
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.8e-14 82.0 48 81.2
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 1.8e-14 82.0 48 81.2
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 1.8e-14 82.0 48 81.2
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 3.0e-14 81.3 48 81.2
CiPaw.12G057900 Carya illinoinensis HOM05D000533 ORTHO05D001069 3.0e-14 81.3 48 81.2
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
CsaV3_6G024010 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
CsaV3_6G025210 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
CsaV3_6G025290 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 3.9e-14 80.9 48 81.2
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
FAN26G3352 Fragaria x ananassa HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
Lalb_Chr01g0010881 Lupinus albus HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
Lalb_Chr01g0010941 Lupinus albus HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 3.9e-14 80.9 48 81.2
Ah.10g028340 Amaranthus hybridus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
HanXRQChr01g0029681 Helianthus annuus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
HanXRQChr08g0236031 Helianthus annuus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
HanXRQChr10g0297201 Helianthus annuus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Lsat_1_v5_gn_2_88021 Lactuca sativa HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Nitab4.5_0012445g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Sopen10g026770 Solanum pennellii HOM05D000533 ORTHO05D001069 6.7e-14 80.1 48 81.2
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.7e-14 79.7 48 79.2
Actinidia34825 Actinidia chinensis HOM05D000533 ORTHO05D001069 1.5e-13 79.0 48 79.2
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 1.5e-13 79.0 48 79.2
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.5e-13 79.0 48 79.2
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 1.5e-13 79.0 48 79.2
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 1.9e-13 78.6 48 79.2
Solyc09g009360.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.9e-13 78.6 48 79.2
Aqoxy3G01141 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 3.3e-13 77.8 48 79.2
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 3.3e-13 77.8 48 79.2
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 3.3e-13 77.8 48 79.2
Gohir.1Z078901 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.3e-13 77.4 48 77.1
HanXRQChr04g0109051 Helianthus annuus HOM05D000533 ORTHO05D001069 4.3e-13 77.4 48 79.2
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 4.3e-13 77.4 48 79.2
GSVIVG01006222001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.3e-13 77.4 48 79.2
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 5.7e-13 77.0 48 79.2
Sopen01g027210 Solanum pennellii HOM05D000533 ORTHO05D001069 9.7e-13 76.3 46 82.6
CDE02G3581 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 1.6e-12 75.5 48 77.1
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 4.8e-12 73.9 48 75.0
Aqoxy4G01614 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.8e-12 73.9 48 75.0
Thecc.08G162800 Theobroma cacao HOM05D000533 ORTHO05D001069 8.2e-12 73.2 48 75.0
TAR383G0007 Trochodendron aralioides HOM05D000533 ORTHO05D001069 1.1e-11 72.8 45 77.8
Nitab4.5_0006806g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.4e-11 72.4 48 75.0
ATR0203G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.8e-11 72.0 48 72.9
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 5.3e-11 70.5 48 70.8
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 6.9e-11 70.1 48 68.8
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 2.6e-10 68.2 48 68.8
Oeu057346.1 Olea europaea HOM05D000533 ORTHO05D001069 1.0e-09 66.2 38 81.6
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.2e-09 65.1 48 68.8
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.2e-09 65.1 48 68.8
AUR62043913 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.5e-09 63.5 37 83.8
Lsat_1_v5_gn_5_16221 Lactuca sativa HOM05D000533 ORTHO05D001069 6.5e-09 63.5 37 78.4
ATR1210G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 8.5e-09 63.2 34 88.2
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.1e-08 62.8 48 64.6
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.1e-08 62.8 48 62.5
Lsat_1_v5_gn_4_171240 Lactuca sativa HOM05D000533 ORTHO05D001069 4.2e-08 60.8 36 80.6
Nitab4.5_0001919g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.5e-08 60.5 36 83.3
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 7.2e-08 60.1 49 51.0
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 2.7e-07 58.2 44 72.7
Solyc10g052800.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.0e-06 54.7 46 65.2
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 3.9e-06 54.3 96 38.5
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 8.8e-06 53.1 34 73.5


User provided reference genes

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