Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 4.4e-187 657.9 357 100.0
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 3.8e-146 521.9 313 91.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 4.9e-138 495.0 311 86.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.8e-116 423.3 311 78.8
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.5e-89 334.0 262 68.7
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.5e-89 333.2 261 70.9
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 4.7e-88 328.9 294 63.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 1.8e-87 327.0 268 67.5
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.2e-86 324.3 278 66.5
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.2e-86 324.3 313 61.0
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.2e-86 324.3 273 66.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.5e-86 323.9 281 65.1
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.0e-86 323.6 223 76.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.6e-86 323.2 252 68.7
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 7.5e-86 321.6 268 66.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 1.3e-85 320.9 245 70.6
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-85 320.9 277 64.3
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 2.8e-85 319.7 277 66.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.8e-85 319.7 277 64.3
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.8e-85 319.7 289 64.0
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.4e-84 317.4 282 62.4
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.8e-84 317.0 256 66.8
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 9.2e-84 314.7 254 66.1
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.2e-83 314.3 245 69.0
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.6e-83 313.9 274 65.7
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 2.7e-83 313.2 225 72.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.5e-83 312.8 236 69.5
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 5.9e-83 312.0 285 62.1
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.6e-82 308.1 224 71.0
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.7e-80 302.4 226 69.0
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.7e-80 302.4 266 63.5
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 8.0e-80 301.6 262 64.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.8e-79 300.4 283 61.8
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.0e-79 299.3 228 68.0
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.7e-78 295.4 281 61.6
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 7.5e-78 295.0 272 59.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.9e-77 293.1 264 64.4
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.1e-76 291.2 275 61.5
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.1e-76 291.2 232 69.0
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.1e-76 291.2 245 66.1
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 1.4e-76 290.8 273 61.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.4e-76 290.8 288 58.3
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 2.4e-76 290.0 217 72.4
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.2e-76 289.7 285 57.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 5.4e-76 288.9 272 58.1
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.2e-75 287.7 277 59.6
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.0e-75 287.0 275 60.4
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.0e-75 287.0 244 61.9
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 5.9e-75 285.4 281 58.0
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.9e-75 285.4 224 65.2
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.8e-75 285.0 253 60.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.0e-74 284.6 202 73.8
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.0e-74 283.1 271 57.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 4.3e-73 279.3 281 59.4
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.6e-72 277.3 321 54.5
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.6e-72 277.3 288 58.7
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.6e-72 277.3 253 58.5
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.6e-72 276.2 258 57.8
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.7e-72 275.8 220 63.6
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 6.2e-72 275.4 238 64.7
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 2.3e-71 273.5 262 59.5
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.0e-71 272.7 275 56.7
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.2e-71 272.3 222 63.5
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 5.2e-71 272.3 305 53.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 8.9e-71 271.6 266 57.9
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.2e-70 271.2 277 56.7
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.6e-70 270.0 294 55.1
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 4.4e-70 269.2 216 66.2
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.8e-70 268.9 265 58.5
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.9e-69 265.8 220 65.0
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 6.4e-69 265.4 227 66.5
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 8.3e-69 265.0 220 64.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.1e-68 264.6 302 56.3
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.4e-68 264.2 184 74.5
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.9e-68 263.8 266 57.1
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.9e-65 253.8 259 57.1
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 5.6e-65 252.3 198 68.7
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 5.6e-65 252.3 250 58.4
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.1e-63 246.5 256 51.2
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.0e-63 246.1 218 58.7
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.4e-62 242.7 305 50.2
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 5.8e-62 242.3 305 51.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.2e-61 240.4 305 49.8
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 2.2e-61 240.4 220 55.5
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.2e-61 240.4 323 49.8
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.1e-60 238.0 228 54.8
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.4e-60 237.7 187 69.0
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 1.9e-60 237.3 249 55.8
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.3e-58 231.1 270 54.4
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 1.3e-58 231.1 270 54.4
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 3.0e-58 229.9 211 55.5
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 6.6e-58 228.8 160 74.4
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 8.1e-56 221.9 236 54.2
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.4e-54 216.1 274 49.3
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 3.8e-53 213.0 222 55.4
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.1e-51 207.2 197 60.9
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.9e-50 203.0 290 46.2
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.5e-49 201.1 145 73.1
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.5e-46 191.0 199 56.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.4e-46 189.9 213 53.5
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.3e-45 188.0 230 50.9
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 7.8e-43 178.7 270 47.0
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.1e-41 174.9 223 42.2
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.4e-39 167.2 143 57.3
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 4.0e-39 166.4 156 56.4
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 3.4e-38 163.3 150 61.3
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.8e-37 159.8 183 51.4
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 1.8e-34 151.0 199 41.7
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.9e-34 149.8 116 65.5
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 8.7e-34 148.7 118 64.4
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 5.6e-33 146.0 243 44.9
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 8.1e-32 142.1 280 39.3
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 5.8e-30 136.0 146 56.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.2e-21 107.5 196 36.7
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 6.5e-21 105.9 147 44.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.5e-17 94.7 187 31.6
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.8e-15 87.8 69 59.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.4e-14 83.6 201 32.3
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.3e-13 81.6 97 45.4
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.9e-13 80.5 69 62.3
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 5.1e-10 69.7 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 1.1e-07 62.0 39 74.4


User provided reference genes

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