Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.5e-254 882.5 498 100.0
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.3e-242 842.8 498 96.4
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 7.2e-236 820.5 498 93.6
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.2e-214 750.0 504 83.3
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 8.0e-187 657.5 498 75.9
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.2e-185 653.7 501 72.7
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 4.4e-185 651.7 500 70.0
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 6.2e-179 631.3 499 71.1
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.0e-177 626.3 500 70.2
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 4.4e-177 625.2 500 68.4
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.5e-177 624.4 500 72.6
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 8.3e-176 620.9 500 72.0
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 5.4e-175 618.2 496 68.1
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 5.4e-175 618.2 496 67.3
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 9.2e-175 617.5 502 69.9
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.6e-174 616.7 501 69.3
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.6e-174 616.7 501 69.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 6.0e-174 614.8 502 71.5
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 1.7e-173 613.2 503 69.2
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.3e-173 612.8 500 67.4
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.0e-173 612.5 499 68.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 3.0e-173 612.5 500 68.2
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 3.0e-173 612.5 500 66.8
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 5.1e-173 611.7 507 66.3
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 5.1e-173 611.7 499 66.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.6e-171 606.7 501 66.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 3.6e-171 605.5 501 71.5
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 2.3e-170 602.8 500 66.8
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.3e-170 602.8 500 65.8
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 3.1e-170 602.4 497 69.6
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 4.0e-170 602.1 511 64.6
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.9e-170 600.9 504 67.1
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.5e-169 600.1 496 67.7
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 3.7e-168 595.5 504 64.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 4.9e-168 595.1 501 64.9
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 6.4e-168 594.7 500 64.8
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 3.2e-167 592.4 522 67.2
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.6e-166 590.1 501 63.5
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.3e-165 587.0 499 68.9
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.7e-165 586.6 515 65.6
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.7e-165 586.6 501 67.5
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 5.6e-164 581.6 496 65.5
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.8e-163 579.3 500 63.0
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 6.2e-163 578.2 499 63.7
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 8.1e-163 577.8 499 64.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 1.4e-162 577.0 496 66.7
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 6.8e-162 574.7 499 63.3
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 8.4e-160 567.8 500 62.4
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.1e-158 563.1 497 61.4
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.7e-158 562.8 499 65.7
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 8.7e-157 557.8 525 60.8
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 8.7e-157 557.8 517 62.1
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 7.3e-156 554.7 518 66.6
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.6e-155 553.5 500 61.8
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 3.1e-154 549.3 499 58.3
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 5.3e-154 548.5 522 64.0
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.0e-153 546.6 501 65.9
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.6e-153 546.2 492 61.0
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.1e-151 540.8 509 62.1
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 7.1e-151 538.1 505 58.4
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 9.3e-151 537.7 501 58.5
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 2.1e-150 536.6 501 58.3
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 5.1e-149 531.9 513 62.0
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.5e-148 530.4 519 58.6
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 2.8e-147 526.2 552 56.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 5.3e-146 521.9 511 56.8
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.2e-145 520.8 508 56.9
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.9e-144 516.2 514 55.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 4.9e-144 515.4 508 56.5
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 6.4e-144 515.0 499 61.1
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.4e-143 513.1 517 55.7
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 9.3e-143 511.1 510 56.1
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.6e-142 510.4 512 55.3
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.8e-141 506.9 513 60.0
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.3e-141 506.5 519 56.8
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 3.0e-141 506.1 510 62.2
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 4.3e-140 502.3 512 55.7
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 9.6e-140 501.1 511 53.6
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 9.6e-140 501.1 546 54.4
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 4.0e-138 495.7 526 54.8
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.2e-137 494.2 505 55.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 9.3e-135 484.6 497 59.4
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 3.9e-133 479.2 509 54.2
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 5.7e-132 475.3 513 54.4
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 9.6e-132 474.6 514 53.3
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 1.1e-130 471.1 508 53.7
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.2e-129 467.6 511 55.2
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 2.6e-129 466.5 511 55.0
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 5.0e-128 462.2 407 58.7
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 3.9e-125 452.6 363 71.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.1e-124 451.1 348 66.7
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 6.3e-123 445.3 501 53.9
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 4.1e-122 442.6 520 53.7
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 1.4e-119 434.1 500 53.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 2.4e-114 416.8 359 67.7
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.7e-102 376.7 332 65.1
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 6.1e-102 375.6 522 43.9
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 8.8e-93 345.1 527 41.6
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.1e-90 338.2 353 59.5
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.0e-90 335.5 504 43.1
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 9.2e-82 308.5 742 33.3
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.1e-70 270.8 190 70.5
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 8.1e-62 242.3 359 46.0
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 3.5e-57 226.9 562 34.0
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 3.3e-39 167.2 147 59.2
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 8.1e-38 162.5 191 54.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 5.3e-29 133.3 108 60.2
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.9e-25 119.4 326 34.4
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.3e-19 102.1 148 42.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.9e-19 100.9 359 29.5
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 6.7e-08 63.2 40 87.5
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 5.7e-07 60.1 53 52.8
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 5.7e-07 60.1 69 43.5
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 1.6e-06 58.5 65 46.2
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 77 42.9
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 2.2e-06 58.2 69 44.9
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 4.8e-06 57.0 73 43.8
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 6.3e-06 56.6 59 50.8
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 6.3e-06 56.6 58 46.6
Actinidia21909 Actinidia chinensis HOM05D004574 ORTHO05D005612 8.2e-06 56.2 49 53.1
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 8.2e-06 56.2 59 49.2
Sc18g0000060 Simmondsia chinensis HOM05D004574 ORTHO05D005612 8.2e-06 56.2 79 43.0


User provided reference genes

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