Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011280.2 Cucumis melo HOM05D001431 ORTHO05D001268 1.5e-75 286.2 152 100.0
CsaV3_2G032300 Cucumis sativus L. HOM05D001431 ORTHO05D001268 1.6e-58 229.6 153 85.0
ClCG08G013540 Citrullus lanatus HOM05D001431 ORTHO05D001268 6.7e-52 207.6 164 75.0
Sed0007135 Sechium edule HOM05D001431 ORTHO05D001268 2.0e-27 126.3 158 53.8
COL.COLO4_18913 Corchorus olitorius HOM05D001431 ORTHO05D001268 2.5e-14 82.8 133 36.8
FAN20G3221 Fragaria x ananassa HOM05D001431 ORTHO05D001268 5.6e-14 81.6 100 44.0
FAN27G3025 Fragaria x ananassa HOM05D001431 ORTHO05D001268 7.3e-14 81.3 121 42.1
FvH4_2g28310 Fragaria vesca HOM05D001431 ORTHO05D001268 9.5e-14 80.9 100 44.0
MELO3C010262.2 Cucumis melo HOM05D001431 ORTHO05D001268 1.2e-13 80.5 122 40.2
CsaV3_1G028510 Cucumis sativus L. HOM05D001431 ORTHO05D001268 2.8e-13 79.3 123 39.8
RcHm_v2.0_Chr6g0297221 Rosa chinensis HOM05D001431 ORTHO05D001268 6.1e-13 78.2 117 40.2
TAR383G0017 Trochodendron aralioides HOM05D001431 ORTHO05D001268 2.3e-12 76.3 115 39.1
ClCG06G012050 Citrullus lanatus HOM05D001431 ORTHO05D001268 3.0e-12 75.9 130 37.7
Duzib168G0286 Durio zibethinus HOM05D001431 ORTHO05D001268 2.0e-11 73.2 112 38.4
Potri.006G259300 Populus trichocarpa HOM05D001431 ORTHO05D001268 2.0e-11 73.2 95 44.2
TAR626G1912 Trochodendron aralioides HOM05D001431 ORTHO05D001268 2.0e-11 73.2 112 37.5
MD15G1130700 Malus domestica HOM05D001431 ORTHO05D001268 2.6e-11 72.8 101 40.6
QL02p091314 Quercus lobata HOM05D001431 ORTHO05D001268 2.6e-11 72.8 115 38.3
Sabra06G0202700 Salix brachista HOM05D001431 ORTHO05D001268 5.7e-11 71.6 95 42.1
Hma1.2p1_0949F.1_g240600 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 1.7e-10 70.1 111 36.9
Prupe.1G486100 Prunus persica HOM05D001431 ORTHO05D001268 2.2e-10 69.7 108 38.9
Cpa.g.sc187.26 Carica papaya HOM05D001431 ORTHO05D001268 2.9e-10 69.3 123 37.4
Hma1.2p1_1784F.1_g302160 Hydrangea macrophylla HOM05D001431 ORTHO05D001268 2.9e-10 69.3 111 36.9
Duzib187G1968 Durio zibethinus HOM05D001431 ORTHO05D001268 1.1e-09 67.4 118 40.7
Haze_21471 Corylus avellana HOM05D024967 ORTHO05D001268 1.4e-09 67.0 125 39.2
Gohir.D06G102000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 1.8e-09 66.6 116 40.5
VMungo1309G2763 Vigna mungo HOM05D001431 ORTHO05D001268 1.8e-09 66.6 114 39.5
Cfa013105 Carpinus fangiana HOM05D024967 ORTHO05D001268 4.1e-09 65.5 126 38.1
Haze_21462 Corylus avellana HOM05D024967 ORTHO05D001268 4.1e-09 65.5 126 38.9
TWI34G1362 Tripterygium wilfordii HOM05D001431 ORTHO05D001268 4.1e-09 65.5 113 38.9
Gohir.A06G099800 Gossypium hirsutum HOM05D001431 ORTHO05D001268 1.2e-08 63.9 116 39.7
Gorai.010G117000 Gossypium raimondii HOM05D001431 ORTHO05D001268 1.6e-08 63.5 116 39.7
DCAR_020906 Daucus carota HOM05D001431 ORTHO05D001268 2.0e-08 63.2 104 34.6
Manes.16G126000 Manihot esculenta HOM05D001431 ORTHO05D001268 2.7e-08 62.8 96 38.5
Psat4g033120 Pisum sativum HOM05D001431 ORTHO05D001268 2.7e-08 62.8 120 35.0
Manes.03G011900 Manihot esculenta HOM05D001431 ORTHO05D001268 4.6e-08 62.0 99 35.4
Sed0026439 Sechium edule HOM05D001431 ORTHO05D001268 5.9e-08 61.6 111 36.9
arahy.Tifrunner.gnm1.ann1.KMWM4V Arachis hypogaea HOM05D001431 ORTHO05D001268 7.8e-08 61.2 109 33.9
AUR62041452 Chenopodium quinoa HOM05D001431 ORTHO05D001268 7.8e-08 61.2 121 33.9
Thecc.09G141800 Theobroma cacao HOM05D001431 ORTHO05D001268 7.8e-08 61.2 68 47.1
MD09G1036100 Malus domestica HOM05D001431 ORTHO05D001268 1.0e-07 60.8 128 37.5
Duzib168G0421 Durio zibethinus HOM05D001431 ORTHO05D001268 1.3e-07 60.5 63 47.6
Actinidia26350 Actinidia chinensis HOM05D000320 ORTHO05D000532 1.7e-07 60.1 83 44.6
Eucgr.C02729 Eucalyptus grandis HOM05D001431 ORTHO05D001268 1.7e-07 60.1 120 35.8
Medtr4g116530 Medicago truncatula HOM05D001431 ORTHO05D001268 1.7e-07 60.1 77 41.6
TPR.G15780 Trifolium pratense HOM05D001431 ORTHO05D001268 1.7e-07 60.1 112 35.7
AUR62011255 Chenopodium quinoa HOM05D001431 ORTHO05D001268 2.3e-07 59.7 98 35.7
Manes.14G138600 Manihot esculenta HOM05D001431 ORTHO05D001268 2.3e-07 59.7 107 31.8
Lju41C33T14 Lonicera japonica HOM05D001431 ORTHO05D001268 3.0e-07 59.3 103 35.0
Ciclev10010338m.g Citrus clementina HOM05D001431 ORTHO05D001268 3.9e-07 58.9 121 33.1
Lalb_Chr07g0179511 Lupinus albus HOM05D001431 ORTHO05D001268 3.9e-07 58.9 110 31.8
Sp2g22300 Schrenkiella parvula HOM05D001431 ORTHO05D001268 3.9e-07 58.9 96 41.7
MSTRG.6092 Avicennia marina HOM05D001431 ORTHO05D001268 5.0e-07 58.5 113 38.9
Ca_27061_v3 Cicer arietinum L. HOM05D001431 ORTHO05D001268 5.0e-07 58.5 109 33.9
Rhsim03G0254500 Rhododendron simsii HOM05D001431 ORTHO05D001268 5.0e-07 58.5 111 33.3
Atru.chr7.2499 Acer truncatum HOM05D001431 ORTHO05D001268 6.6e-07 58.2 158 27.8
Cfa019090 Carpinus fangiana HOM05D001431 ORTHO05D001268 6.6e-07 58.2 102 36.3
Cfa020891 Carpinus fangiana HOM05D001431 ORTHO05D001268 6.6e-07 58.2 117 37.6
Potri.018G114200 Populus trichocarpa HOM05D001431 ORTHO05D001268 6.6e-07 58.2 109 37.6
QL02p091271 Quercus lobata HOM05D001431 ORTHO05D001268 6.6e-07 58.2 113 34.5
FAN24G3016 Fragaria x ananassa HOM05D001431 ORTHO05D001268 8.6e-07 57.8 98 35.7
MBI15_g10642_MAGBIO Magnolia biondii HOM05D001431 ORTHO05D001268 8.6e-07 57.8 117 34.2
Actinidia14101 Actinidia chinensis HOM05D001431 ORTHO05D001268 1.1e-06 57.4 61 41.0
Duzib187G1758 Durio zibethinus HOM05D001431 ORTHO05D001268 1.1e-06 57.4 120 35.8
Oeu054677.1 Olea europaea HOM05D001431 ORTHO05D001268 1.1e-06 57.4 111 32.4
Peaxi162Scf01184g00111 Petunia axillaris HOM05D001431 ORTHO05D001268 1.1e-06 57.4 130 33.8
CiPaw.07G227000 Carya illinoinensis HOM05D001431 ORTHO05D001268 1.5e-06 57.0 123 31.7
Peaxi162Scf00391g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 1.5e-06 57.0 100 36.0
Phvul.009G209600 Phaseolus vulgaris HOM05D001431 ORTHO05D001268 1.5e-06 57.0 111 37.8
TPR.G22802 Trifolium pratense HOM05D001431 ORTHO05D001268 1.5e-06 57.0 112 35.7
Glyma.04G064200 Glycine max HOM05D030354 ORTHO05D029741 1.9e-06 56.6 97 36.1
Sabra18G0097100 Salix brachista HOM05D001431 ORTHO05D001268 1.9e-06 56.6 116 38.8
A02p39860 Brassica napus HOM05D001431 ORTHO05D001268 2.5e-06 56.2 93 40.9
C02p59750 Brassica napus HOM05D001431 ORTHO05D001268 2.5e-06 56.2 93 40.9
BolC2t12031H Brassica oleracea HOM05D001431 ORTHO05D001268 2.5e-06 56.2 93 40.9
BraA02t08948Z Brassica rapa HOM05D001431 ORTHO05D001268 2.5e-06 56.2 93 40.9
Haze_07487 Corylus avellana HOM05D001431 ORTHO05D001268 2.5e-06 56.2 103 36.9
ECA240G3019 Erigeron canadensis HOM05D001431 ORTHO05D001268 2.5e-06 56.2 119 32.8
Thhalv10005131m.g Eutrema salsugineum HOM05D001431 ORTHO05D001268 2.5e-06 56.2 91 39.6
Glyma.15G202100 Glycine max HOM05D001431 ORTHO05D001268 2.5e-06 56.2 115 33.0
Lsat_1_v5_gn_7_47921 Lactuca sativa HOM05D001431 ORTHO05D001268 2.5e-06 56.2 106 34.9
Peaxi162Scf01184g00110 Petunia axillaris HOM05D001431 ORTHO05D001268 2.5e-06 56.2 118 33.9
THA.LOC104814117 Tarenaya hassleriana HOM05D001431 ORTHO05D001268 2.5e-06 56.2 118 30.5
Atru.chr7.261 Acer truncatum HOM05D001431 ORTHO05D001268 3.3e-06 55.8 116 31.9
Glyma.13G157400 Glycine max HOM05D001431 ORTHO05D001268 3.3e-06 55.8 112 34.8
Gohir.A06G050000 Gossypium hirsutum HOM05D001431 ORTHO05D001268 3.3e-06 55.8 121 36.4
MD17G1037700 Malus domestica HOM05D001431 ORTHO05D001268 3.3e-06 55.8 94 38.3
Peaxi162Scf00108g00003 Petunia axillaris HOM05D001431 ORTHO05D001268 3.3e-06 55.8 118 34.7
Psat0ss25082g0080 Pisum sativum HOM05D001431 ORTHO05D001268 3.3e-06 55.8 111 36.0
Sed0005869 Sechium edule HOM05D001431 ORTHO05D001268 3.3e-06 55.8 93 38.7
HanXRQChr03g0064021 Helianthus annuus HOM05D001431 ORTHO05D001268 5.6e-06 55.1 92 34.8
CARHR188250 Cardamine hirsuta HOM05D001431 ORTHO05D001268 7.3e-06 54.7 106 37.7
Eucgr.C02728 Eucalyptus grandis HOM05D001431 ORTHO05D001268 7.3e-06 54.7 107 34.6
Lj6g0025598 Lotus japonicus HOM05D001431 ORTHO05D001268 7.3e-06 54.7 113 34.5
COL.COLO4_24101 Corchorus olitorius HOM05D001431 ORTHO05D001268 9.5e-06 54.3 114 31.6
Glyma.17G105000 Glycine max HOM05D001431 ORTHO05D001268 9.5e-06 54.3 111 34.2
Peaxi162Scf00108g00002 Petunia axillaris HOM05D001431 ORTHO05D001268 9.5e-06 54.3 130 32.3


User provided reference genes

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