Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 7.8e-175 617.1 321 100.0
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 7.3e-165 583.9 321 94.4
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.1e-140 502.7 369 76.4
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.2e-135 486.9 290 87.9
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 3.3e-117 425.6 322 71.7
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.4e-115 419.5 322 70.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.7e-113 413.3 321 71.7
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.7e-113 413.3 321 67.9
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.9e-113 412.5 324 71.0
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 6.5e-113 411.4 289 74.7
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.5e-112 409.5 320 70.0
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.5e-112 408.3 289 74.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 2.1e-111 406.4 320 68.4
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.5e-111 405.6 323 70.3
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 7.9e-111 404.4 326 69.0
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 7.9e-111 404.4 321 70.1
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.0e-110 404.1 296 74.0
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.1e-110 401.7 319 68.7
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 5.1e-110 401.7 315 67.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 5.1e-110 401.7 326 69.0
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 5.1e-110 401.7 325 68.6
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 8.7e-110 401.0 284 75.0
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.1e-109 400.6 262 79.4
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.5e-109 400.2 321 69.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.9e-109 399.8 321 67.9
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.9e-109 399.8 262 80.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 2.5e-109 399.4 269 77.7
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.3e-109 399.1 287 73.5
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 4.3e-109 398.7 292 74.0
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 7.4e-109 397.9 322 67.7
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.4e-109 397.9 321 68.8
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.6e-108 396.7 319 66.5
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 2.2e-108 396.4 316 67.7
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.2e-108 396.4 294 72.1
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.2e-108 396.4 321 67.9
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.8e-108 396.0 287 71.1
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 2.8e-108 396.0 321 68.8
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 6.3e-108 394.8 303 71.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 8.2e-108 394.4 332 66.9
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.1e-107 394.0 321 68.5
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.1e-107 394.0 291 73.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.1e-107 394.0 320 68.8
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.4e-107 392.9 320 66.2
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 3.1e-107 392.5 296 70.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.9e-107 391.3 305 71.1
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.2e-106 390.6 320 66.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.2e-106 390.6 288 72.2
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.5e-106 390.2 321 67.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.4e-106 389.0 295 71.2
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.5e-106 388.7 324 65.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.0e-105 387.5 342 63.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.0e-105 387.5 319 67.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 1.7e-105 386.7 320 66.9
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 3.8e-105 385.6 325 66.2
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 6.5e-105 384.8 287 71.8
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.1e-104 384.0 327 64.5
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.1e-104 384.0 320 66.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.1e-104 384.0 319 65.8
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 5.5e-104 381.7 327 65.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 7.2e-104 381.3 250 80.4
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 9.4e-104 380.9 321 66.4
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 9.4e-104 380.9 304 69.1
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 9.4e-104 380.9 336 63.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 9.4e-104 380.9 326 66.0
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 9.4e-104 380.9 326 65.0
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.6e-103 378.6 325 65.5
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 6.1e-103 378.3 324 65.1
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 7.9e-103 377.9 320 65.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.8e-102 376.7 322 65.5
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.3e-102 376.3 326 65.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.9e-102 375.6 342 61.7
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 6.7e-102 374.8 249 78.7
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 1.1e-101 374.0 304 68.4
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.5e-101 373.6 293 68.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 2.5e-101 372.9 261 74.7
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 4.3e-101 372.1 327 65.4
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 5.7e-101 371.7 321 64.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 9.7e-101 370.9 338 64.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.1e-99 367.5 238 79.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 3.1e-99 365.9 320 64.7
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 7.7e-98 361.3 328 62.5
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 8.5e-97 357.8 236 78.4
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 1.4e-94 350.5 340 60.3
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.3e-94 349.7 352 60.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.7e-92 343.6 250 72.8
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.2e-90 337.4 252 66.7
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.2e-89 333.2 321 58.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.9e-88 330.1 235 72.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 8.0e-87 324.7 291 61.5
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 8.0e-87 324.7 282 61.0
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 8.8e-86 321.2 257 68.1
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.5e-85 320.5 221 75.1
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.0e-85 320.1 232 72.8
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.6e-82 310.5 320 57.2
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 4.7e-79 298.9 216 67.6
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.2e-77 294.3 221 71.9
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 7.5e-77 291.6 224 70.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 3.1e-75 286.2 217 70.0
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.5e-74 282.3 190 75.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 6.1e-71 271.9 311 49.2
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.0e-70 269.6 257 60.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.4e-67 260.8 285 49.8
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 4.1e-67 259.2 260 52.3
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.8e-60 236.5 263 47.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.2e-59 231.5 251 49.8
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.7e-57 227.3 253 48.2
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.1e-56 224.6 253 48.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.1e-56 224.6 249 50.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 2.0e-50 203.8 129 79.8
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 4.7e-47 192.6 256 39.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.1e-40 171.4 125 73.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 1.5e-40 171.0 249 41.0
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 6.8e-38 162.2 246 35.8
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.2e-35 153.3 165 57.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 3.3e-24 116.7 244 29.9
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 6.9e-22 109.0 235 32.3
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 4.9e-20 102.8 287 35.9
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 8.1e-07 58.9 32 93.8


User provided reference genes

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