Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010874.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.0e-86 322.4 161 100.0
CsaV3_2G027950 Cucumis sativus L. HOM05D000955 ORTHO05D001429 8.1e-72 273.9 162 84.6
ClCG08G015810 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.7e-43 179.1 169 62.7
Sed0005408 Sechium edule HOM05D000955 ORTHO05D001429 3.4e-38 162.2 164 56.1
Sed0019916 Sechium edule HOM05D000955 ORTHO05D001429 1.0e-26 124.0 162 46.3
Sed0027202 Sechium edule HOM05D000955 ORTHO05D001429 7.7e-22 107.8 147 41.5
CsaV3_2G027890 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.4e-20 103.6 140 42.9
ClCG08G015790 Citrullus lanatus HOM05D000955 ORTHO05D001429 9.4e-20 100.9 170 36.5
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.6e-19 100.1 161 38.5
Sed0009213 Sechium edule HOM05D000955 ORTHO05D001429 3.0e-18 95.9 155 40.6
Sed0023504 Sechium edule HOM05D000955 ORTHO05D001429 3.0e-18 95.9 155 40.0
ClCG08G015840 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.9e-18 95.5 136 41.2
Sed0014774 Sechium edule HOM05D000955 ORTHO05D001429 5.1e-18 95.1 155 39.4
Sed0008372 Sechium edule HOM05D000955 ORTHO05D001429 6.7e-18 94.7 144 41.0
Sed0008712 Sechium edule HOM05D000955 ORTHO05D001429 8.8e-18 94.4 136 38.2
ClCG08G015800 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.0e-17 93.2 145 39.3
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.0e-17 93.2 154 37.7
Sed0013848 Sechium edule HOM05D000955 ORTHO05D001429 3.3e-17 92.4 155 38.7
Sed0017113 Sechium edule HOM05D000955 ORTHO05D001429 2.2e-16 89.7 78 57.7
MELO3C010869.2 Cucumis melo HOM05D000955 ORTHO05D001429 4.8e-16 88.6 80 50.0
ClCG08G015850 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.4e-15 87.0 74 52.7
MELO3C010875.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.8e-15 86.7 84 51.2
CsaV3_2G027960 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.1e-15 85.9 81 53.1
Sed0014822 Sechium edule HOM05D000955 ORTHO05D001429 3.1e-15 85.9 156 39.1
Sed0008843 Sechium edule HOM05D000955 ORTHO05D001429 4.1e-15 85.5 76 56.6
CsaV3_2G027880 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.2e-14 84.0 80 46.2
MELO3C010866.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.0e-14 83.2 77 50.6
Sed0015785 Sechium edule HOM05D000955 ORTHO05D001429 2.0e-14 83.2 73 52.1
Sed0024187 Sechium edule HOM05D000955 ORTHO05D001429 7.7e-14 81.3 73 53.4
ClCG08G015880 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.0e-13 80.9 75 48.0
ClCG11G000380 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.2e-13 79.7 176 33.5
CsaV3_4G034260 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.2e-13 79.7 70 55.7
MELO3C016746.2 Cucumis melo HOM05D000955 ORTHO05D001429 5.0e-13 78.6 70 55.7
CsaV3_2G027860 Cucumis sativus L. HOM05D000955 ORTHO05D001429 6.5e-13 78.2 76 47.4
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.1e-12 77.4 70 52.9
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 1.1e-12 77.4 70 54.3
CsaV3_5G015470 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.4e-12 77.0 159 35.2
ClCG08G015820 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.2e-12 75.9 66 53.0
CsaV3_2G027920 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.2e-12 75.9 76 44.7
Sed0018620 Sechium edule HOM05D000955 ORTHO05D001429 3.2e-12 75.9 75 48.0
MELO3C010868.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.6e-11 73.6 81 46.9
CsaV3_2G027870 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.6e-11 73.6 85 44.7
MELO3C010870.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.1e-11 73.2 140 35.0
Sed0024179 Sechium edule HOM05D000955 ORTHO05D001429 3.6e-11 72.4 78 44.9
Sed0011985 Sechium edule HOM05D000955 ORTHO05D001429 4.7e-11 72.0 77 45.5
Sed0019635 Sechium edule HOM05D000955 ORTHO05D001429 4.7e-11 72.0 77 45.5
Sed0019946 Sechium edule HOM05D000955 ORTHO05D001429 8.0e-11 71.2 226 27.4
MELO3C026462.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.8e-10 70.1 161 30.4
Sed0004971 Sechium edule HOM05D000955 ORTHO05D001429 1.8e-10 70.1 77 45.5
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 2.3e-10 69.7 70 48.6
ClCG08G015860 Citrullus lanatus HOM05D000955 ORTHO05D001429 6.7e-10 68.2 81 44.4
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 6.7e-10 68.2 90 38.9
Cfa018544 Carpinus fangiana HOM05D000955 ORTHO05D001429 5.7e-09 65.1 74 43.2
Gohir.D02G091700 Gossypium hirsutum HOM05D000955 ORTHO05D001429 9.7e-09 64.3 71 43.7
Gorai.005G102800 Gossypium raimondii HOM05D000955 ORTHO05D001429 9.7e-09 64.3 71 43.7
Sed0014291 Sechium edule HOM05D000955 ORTHO05D001429 9.7e-09 64.3 70 44.3
Manes.04G102800 Manihot esculenta HOM05D000955 ORTHO05D001429 1.3e-08 63.9 69 40.6
Manes.04G103100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.3e-08 63.9 86 37.2
MELO3C010863.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.7e-08 63.5 68 45.6
CsaV3_2G027930 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.2e-08 63.2 71 42.3
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 2.8e-08 62.8 73 42.5
Manes.04G102900 Manihot esculenta HOM05D000955 ORTHO05D001429 3.7e-08 62.4 69 39.1
Manes.04G103000 Manihot esculenta HOM05D000955 ORTHO05D001429 3.7e-08 62.4 86 33.7
Sed0026745 Sechium edule HOM05D000955 ORTHO05D001429 3.7e-08 62.4 76 39.5
Sed0002759 Sechium edule HOM05D000955 ORTHO05D001429 4.8e-08 62.0 67 44.8
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 6.3e-08 61.6 69 43.5
Sed0010424 Sechium edule HOM05D000955 ORTHO05D001429 6.3e-08 61.6 74 39.2
Gohir.D06G016300 Gossypium hirsutum HOM05D000955 ORTHO05D001429 8.2e-08 61.2 70 37.1
Gorai.010G019200 Gossypium raimondii HOM05D000955 ORTHO05D001429 8.2e-08 61.2 70 37.1
Sed0024453 Sechium edule HOM05D000955 ORTHO05D001429 8.2e-08 61.2 72 38.9
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 8.2e-08 61.2 72 40.3
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 8.2e-08 61.2 161 27.3
Thecc.08G009900 Theobroma cacao HOM05D000955 ORTHO05D001429 1.4e-07 60.5 71 42.3
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 1.8e-07 60.1 72 41.7
CsaV3_2G027840 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.8e-07 60.1 65 44.6
Gohir.A03G076900 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.8e-07 60.1 71 42.3
Gorai.005G102700 Gossypium raimondii HOM05D000955 ORTHO05D001429 1.8e-07 60.1 71 42.3
COL.COLO4_08734 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.4e-07 59.7 82 41.5
COL.COLO4_26489 Corchorus olitorius HOM05D000955 ORTHO05D001429 2.4e-07 59.7 75 38.7
Cfa018536 Carpinus fangiana HOM05D000955 ORTHO05D001429 3.1e-07 59.3 72 38.9
MELO3C010865.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.1e-07 59.3 68 44.1
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 4.1e-07 58.9 67 40.3
Sed0019585 Sechium edule HOM05D000955 ORTHO05D001429 4.1e-07 58.9 72 38.9
Atru.chr13.685 Acer truncatum HOM05D000955 ORTHO05D001429 5.3e-07 58.5 66 43.9
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 5.3e-07 58.5 72 38.9
QL02p005158 Quercus lobata HOM05D000955 ORTHO05D001429 5.3e-07 58.5 69 42.0
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 7.0e-07 58.2 72 40.3
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 7.0e-07 58.2 72 40.3
COL.COLO4_26491 Corchorus olitorius HOM05D000955 ORTHO05D001429 7.0e-07 58.2 74 39.2
Oeu004829.1 Olea europaea HOM05D000955 ORTHO05D003340 7.0e-07 58.2 80 33.8
Prupe.1G436800 Prunus persica HOM05D000955 ORTHO05D001429 7.0e-07 58.2 73 41.1
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 7.0e-07 58.2 82 36.6
Prupe.1G437000 Prunus persica HOM05D000955 ORTHO05D001429 7.0e-07 58.2 73 41.1
Cfa018535 Carpinus fangiana HOM05D000955 ORTHO05D001429 9.1e-07 57.8 72 40.3
Haze_17535 Corylus avellana HOM05D000955 ORTHO05D001429 9.1e-07 57.8 72 38.9
Potri.002G126900 Populus trichocarpa HOM05D000955 ORTHO05D001429 9.1e-07 57.8 79 38.0
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 1.2e-06 57.4 68 41.2
COL.COLO4_26490 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.2e-06 57.4 73 38.4
PGR031G2327 Punica granatum HOM05D000955 ORTHO05D001429 1.2e-06 57.4 69 40.6
Thecc.08G009700 Theobroma cacao HOM05D000955 ORTHO05D001429 1.2e-06 57.4 77 39.0
Cfa018533 Carpinus fangiana HOM05D000955 ORTHO05D001429 1.6e-06 57.0 71 40.8
COL.COLO4_26501 Corchorus olitorius HOM05D000955 ORTHO05D001429 1.6e-06 57.0 102 35.3
Gohir.D02G091600 Gossypium hirsutum HOM05D000955 ORTHO05D001429 1.6e-06 57.0 71 40.8
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 1.6e-06 57.0 75 33.3
CiPaw.15G060100 Carya illinoinensis HOM05D000955 ORTHO05D001429 2.0e-06 56.6 72 37.5
MELO3C016745.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.0e-06 56.6 74 39.2
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 2.0e-06 56.6 92 39.1
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 2.6e-06 56.2 72 37.5
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.6e-06 56.2 73 37.0
CsaV3_2G027850 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.6e-06 56.2 68 41.2
Prupe.1G437100 Prunus persica HOM05D000955 ORTHO05D001429 2.6e-06 56.2 75 38.7
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 2.6e-06 56.2 79 39.2
Sed0022222 Sechium edule HOM05D000955 ORTHO05D001429 2.6e-06 56.2 72 38.9
TWI36G1691 Tripterygium wilfordii HOM05D000955 ORTHO05D001429 2.6e-06 56.2 86 38.4
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 3.5e-06 55.8 71 36.6
QL02p005168 Quercus lobata HOM05D000955 ORTHO05D001429 3.5e-06 55.8 65 43.1
QL02p005180 Quercus lobata HOM05D000955 ORTHO05D001429 3.5e-06 55.8 70 38.6
Cfa018537 Carpinus fangiana HOM05D000955 ORTHO05D001429 4.5e-06 55.5 76 34.2
CsaV3_4G034250 Cucumis sativus L. HOM05D000955 ORTHO05D001429 4.5e-06 55.5 74 36.5
Duzib116G0476 Durio zibethinus HOM05D000955 ORTHO05D001429 4.5e-06 55.5 85 38.8
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 5.9e-06 55.1 72 37.5
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 5.9e-06 55.1 73 35.6
ClCG05G019800 Citrullus lanatus HOM05D000955 ORTHO05D001429 5.9e-06 55.1 74 36.5
Migut.H00440 Erythranthe guttata HOM05D000955 ORTHO05D003340 5.9e-06 55.1 78 37.2
Manes.04G102700 Manihot esculenta HOM05D000955 ORTHO05D001429 5.9e-06 55.1 88 30.7
Medtr1g019600 Medicago truncatula HOM05D000955 ORTHO05D001429 5.9e-06 55.1 81 37.0
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 5.9e-06 55.1 71 35.2
Ah.05g171940 Amaranthus hybridus HOM05D000955 ORTHO05D001429 7.7e-06 54.7 69 37.7
AUR62014426 Chenopodium quinoa HOM05D000955 ORTHO05D001429 7.7e-06 54.7 72 37.5
AUR62034571 Chenopodium quinoa HOM05D000955 ORTHO05D001429 7.7e-06 54.7 72 37.5
Potri.008G079132 Populus trichocarpa HOM05D000955 ORTHO05D001429 7.7e-06 54.7 77 36.4


User provided reference genes

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