Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.2e-146 523.1 261 100.0
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 7.8e-141 503.8 261 95.4
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 2.1e-133 479.2 251 94.0
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 3.1e-97 359.0 260 67.7
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 1.7e-95 353.2 267 67.8
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 4.2e-94 348.6 267 67.0
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 6.7e-92 341.3 270 68.5
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 1.5e-91 340.1 264 66.3
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.3e-91 338.6 266 65.8
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 5.7e-91 338.2 273 66.3
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.7e-91 338.2 261 65.9
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 7.4e-91 337.8 273 64.8
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 3.7e-90 335.5 277 63.5
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 4.8e-90 335.1 265 67.9
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 6.3e-90 334.7 269 65.8
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 3.1e-89 332.4 274 65.0
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 2.9e-87 325.9 269 63.2
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 5.0e-87 325.1 257 63.8
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 1.1e-86 323.9 271 61.3
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 3.2e-86 322.4 272 63.6
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 2.7e-85 319.3 261 65.1
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 3.5e-85 318.9 270 63.7
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 1.0e-84 317.4 270 63.0
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 1.3e-84 317.0 259 62.2
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 5.1e-84 315.1 270 61.1
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 8.7e-84 314.3 265 63.4
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.3e-82 310.5 265 61.9
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 3.7e-82 308.9 265 61.1
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 6.9e-81 304.7 273 60.1
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.2e-80 303.9 272 58.1
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.5e-80 303.5 254 64.2
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 5.9e-80 301.6 258 58.5
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 2.9e-79 299.3 256 59.0
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 3.8e-79 298.9 261 59.0
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 5.0e-79 298.5 256 59.0
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 5.0e-79 298.5 263 57.4
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 8.5e-79 297.7 240 65.0
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 1.4e-78 297.0 238 63.9
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 3.2e-78 295.8 270 63.7
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 4.2e-78 295.4 259 59.1
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 9.4e-78 294.3 247 61.9
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 1.2e-77 293.9 249 63.1
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 2.1e-77 293.1 263 56.7
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 4.6e-77 292.0 266 57.9
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 6.1e-77 291.6 260 59.2
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.8e-76 290.0 256 60.2
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 3.9e-76 288.9 266 60.2
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 3.9e-76 288.9 251 59.4
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 6.7e-76 288.1 266 57.5
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 8.8e-76 287.7 259 58.3
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 8.8e-76 287.7 275 58.9
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.1e-75 287.3 266 57.9
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.5e-75 287.0 272 57.0
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 4.3e-75 285.4 221 63.3
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 5.7e-75 285.0 271 60.1
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 7.4e-75 284.6 274 54.7
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 7.4e-75 284.6 179 74.9
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 3.7e-74 282.3 259 56.8
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 6.3e-74 281.6 177 76.8
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 1.1e-73 280.8 247 57.5
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.1e-73 280.8 276 58.3
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 1.4e-73 280.4 275 57.8
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.8e-73 280.0 250 58.8
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 4.1e-73 278.9 282 57.1
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 6.9e-73 278.1 282 56.4
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 2.6e-72 276.2 248 59.7
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.6e-72 276.2 215 62.8
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 2.6e-72 276.2 272 54.8
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 3.4e-72 275.8 179 73.7
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 1.0e-71 274.2 246 61.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.0e-71 274.2 272 53.3
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 5.0e-71 271.9 258 58.5
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 1.4e-70 270.4 284 54.2
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 3.2e-70 269.2 233 58.4
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 3.2e-70 269.2 219 61.6
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 9.4e-70 267.7 234 59.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.2e-69 267.3 214 61.2
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 1.6e-69 266.9 317 51.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 7.9e-69 264.6 262 55.7
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.8e-68 263.5 193 71.5
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 5.1e-68 261.9 204 64.2
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 8.8e-68 261.2 266 52.3
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 2.0e-67 260.0 268 55.2
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 9.7e-67 257.7 268 56.0
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.3e-66 257.3 249 57.0
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 1.8e-65 253.4 253 53.4
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 3.1e-65 252.7 270 55.2
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 9.1e-65 251.1 268 53.7
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.0e-64 250.0 265 53.6
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.5e-64 249.2 265 53.2
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 1.7e-63 246.9 254 54.3
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 8.2e-58 228.0 271 49.8
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 3.1e-57 226.1 193 59.6
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.2e-53 214.2 138 71.7
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.6e-53 213.8 214 57.5
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 2.0e-51 206.8 194 61.3
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 3.7e-50 202.6 208 54.3
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.1e-49 201.1 170 61.2
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 4.1e-49 199.1 202 51.0
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 7.7e-48 194.9 182 51.6
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 9.4e-46 188.0 226 46.0
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-42 175.3 179 49.7
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 2.6e-35 153.3 149 57.7
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.6e-32 142.5 205 47.3
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 7.8e-32 141.7 201 43.8
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 8.6e-31 138.3 81 79.0
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 1.0e-28 131.3 92 66.3
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 3.5e-24 116.3 76 69.7
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.5e-22 110.9 152 41.4
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 5.4e-17 92.4 95 50.5
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 4.0e-12 76.3 47 80.9


User provided reference genes

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