Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 1.5e-92 342.8 171 100.0
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 4.9e-67 258.1 135 94.1
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 3.9e-56 221.9 137 82.5
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 6.2e-54 214.5 136 78.7
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 1.1e-53 213.8 136 78.7
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.4e-53 213.4 135 77.8
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 2.0e-52 209.5 133 79.7
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 3.4e-52 208.8 136 75.7
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.4e-52 208.8 136 75.7
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.4e-52 208.8 136 75.7
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 3.4e-52 208.8 136 75.7
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 4.4e-52 208.4 143 74.1
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 5.8e-52 208.0 134 75.4
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.3e-51 206.8 136 77.9
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 2.9e-51 205.7 138 74.6
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.9e-51 205.7 136 75.0
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.4e-50 203.4 138 75.4
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 2.4e-50 202.6 136 75.0
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 3.2e-50 202.2 142 75.4
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 4.1e-50 201.8 140 72.9
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.2e-50 200.7 136 75.0
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 9.2e-50 200.7 136 74.3
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 4.6e-49 198.4 138 76.1
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.6e-49 198.4 136 71.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.6e-49 198.4 136 75.7
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 6.0e-49 198.0 136 72.8
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 7.8e-49 197.6 138 73.2
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.3e-48 196.1 136 74.3
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.3e-48 196.1 136 74.3
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 3.0e-48 195.7 138 73.9
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 3.9e-48 195.3 136 73.5
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 5.1e-48 194.9 139 72.7
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 6.6e-48 194.5 142 73.2
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 8.6e-48 194.1 136 74.3
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 1.5e-47 193.4 136 73.5
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 1.5e-47 193.4 136 73.5
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.5e-47 193.4 138 73.2
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.5e-47 193.4 134 76.1
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.9e-47 193.0 136 73.5
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 1.9e-47 193.0 142 71.1
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 2.5e-47 192.6 137 75.2
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 2.5e-47 192.6 142 69.7
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 2.5e-47 192.6 139 70.5
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 3.3e-47 192.2 138 73.2
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 3.3e-47 192.2 138 73.2
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 4.3e-47 191.8 146 72.6
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 9.6e-47 190.7 138 73.2
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 9.6e-47 190.7 137 73.0
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 9.6e-47 190.7 137 73.0
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 1.6e-46 189.9 138 68.1
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.1e-46 189.5 141 73.0
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.8e-46 189.1 139 72.7
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 6.2e-46 188.0 147 66.7
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 8.1e-46 187.6 139 69.1
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.1e-45 187.2 142 70.4
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 2.4e-45 186.0 144 72.2
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 4.0e-45 185.3 144 71.5
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 5.2e-45 184.9 137 67.9
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 1.2e-44 183.7 139 69.8
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 1.2e-44 183.7 138 73.2
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 2.0e-44 183.0 140 69.3
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 2.6e-44 182.6 137 67.2
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 7.6e-44 181.0 140 70.0
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 7.6e-44 181.0 138 66.7
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 9.9e-44 180.6 136 71.3
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 9.9e-44 180.6 136 71.3
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 2.9e-43 179.1 122 72.1
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 4.9e-43 178.3 137 67.2
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 1.1e-42 177.2 142 66.9
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.4e-42 176.8 135 64.4
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 1.4e-42 176.8 136 69.1
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 4.2e-42 175.3 166 60.2
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 5.4e-42 174.9 137 71.5
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 9.3e-42 174.1 141 64.5
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 6.6e-40 167.9 146 65.8
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.1e-38 162.9 135 62.2
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 3.6e-38 162.2 138 68.1
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.8e-37 159.8 88 87.5
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 4.0e-37 158.7 146 63.0
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 9.0e-37 157.5 139 60.4
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 4.4e-36 155.2 145 60.0
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 1.3e-35 153.7 89 86.5
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 2.2e-35 152.9 143 60.8
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 6.4e-35 151.4 138 58.7
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 8.4e-35 151.0 140 57.9
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 1.1e-34 150.6 144 61.1
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 2.4e-34 149.4 144 60.4
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.1e-33 146.4 113 65.5
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 2.3e-32 142.9 93 75.3
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 5.1e-32 141.7 92 75.0
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 8.7e-32 141.0 142 55.6
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.1e-31 140.6 137 56.9
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.5e-31 140.2 140 56.4
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 9.6e-31 137.5 73 89.0
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 1.4e-29 133.7 66 90.9
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 9.3e-26 120.9 142 50.7
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 7.4e-23 111.3 93 61.3
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 1.4e-21 107.1 94 55.3
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 3.4e-20 102.4 104 51.9
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 2.2e-19 99.8 94 55.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.1e-18 97.4 49 91.8
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.4e-18 97.1 96 57.3
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 5.5e-18 95.1 49 89.8
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.6e-17 93.6 46 93.5
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 4.6e-17 92.0 91 59.3
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 6.0e-17 91.7 50 88.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 7.9e-17 91.3 46 91.3
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 2.5e-15 86.3 86 47.7
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 6.2e-14 81.6 96 42.7
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 3.1e-13 79.3 61 67.2
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 2.1e-09 66.6 130 39.2
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 3.0e-08 62.8 100 44.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 5.1e-08 62.0 32 90.6
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 4.3e-07 58.9 124 33.1
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.6e-06 57.0 28 92.9


User provided reference genes

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