Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 2.2e-91 339.0 176 100.0
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 3.2e-45 185.7 161 65.2
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 4.0e-32 142.1 131 65.6
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 2.7e-28 129.4 75 90.7
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.5e-28 129.0 75 89.3
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 1.0e-27 127.5 75 88.0
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.3e-27 127.1 80 87.5
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.7e-27 126.7 81 84.0
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 5.1e-27 125.2 80 85.0
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 5.1e-27 125.2 80 81.2
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 6.6e-27 124.8 96 71.9
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 6.6e-27 124.8 82 84.1
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.6e-27 124.8 82 82.9
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.6e-27 124.8 79 82.3
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 8.7e-27 124.4 79 82.3
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 8.7e-27 124.4 75 85.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 1.1e-26 124.0 80 81.2
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 1.1e-26 124.0 77 83.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.1e-26 124.0 80 82.5
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 1.1e-26 124.0 80 83.8
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.5e-26 123.6 80 85.0
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 1.9e-26 123.2 77 87.0
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 1.9e-26 123.2 93 74.2
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 1.9e-26 123.2 80 83.8
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 1.9e-26 123.2 80 82.5
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.5e-26 122.9 80 82.5
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.3e-26 122.5 74 85.1
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 3.3e-26 122.5 75 84.0
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 3.3e-26 122.5 105 67.6
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 4.3e-26 122.1 79 83.5
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 4.3e-26 122.1 93 73.1
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 4.3e-26 122.1 79 83.5
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 4.3e-26 122.1 81 82.7
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 5.6e-26 121.7 150 53.3
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 5.6e-26 121.7 75 88.0
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 5.6e-26 121.7 76 85.5
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.6e-26 121.7 75 86.7
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 7.3e-26 121.3 92 71.7
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 7.3e-26 121.3 73 86.3
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 7.3e-26 121.3 80 83.8
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 1.2e-25 120.6 78 85.9
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 1.2e-25 120.6 80 80.0
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.6e-25 120.2 94 70.2
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 1.6e-25 120.2 74 85.1
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 2.1e-25 119.8 72 88.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 2.1e-25 119.8 79 78.5
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.8e-25 119.4 74 87.8
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 2.8e-25 119.4 66 93.9
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 3.6e-25 119.0 121 62.0
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 4.7e-25 118.6 80 81.2
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.2e-25 118.2 72 86.1
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 6.2e-25 118.2 72 86.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 6.2e-25 118.2 77 81.8
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 8.1e-25 117.9 67 92.5
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 8.1e-25 117.9 67 85.1
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 8.1e-25 117.9 66 90.9
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 1.1e-24 117.5 83 77.1
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 1.1e-24 117.5 80 80.0
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 1.1e-24 117.5 74 82.4
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.4e-24 117.1 80 78.8
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.4e-24 117.1 66 92.4
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.8e-24 116.7 71 87.3
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.8e-24 116.7 66 92.4
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 1.8e-24 116.7 67 88.1
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.8e-24 116.7 90 72.2
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.8e-24 116.7 90 72.2
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 2.4e-24 116.3 80 76.2
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 2.4e-24 116.3 78 79.5
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 2.4e-24 116.3 80 80.0
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.4e-24 116.3 80 77.5
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 2.4e-24 116.3 82 78.0
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 3.1e-24 115.9 80 78.8
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 3.1e-24 115.9 80 80.0
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 4.0e-24 115.5 78 75.6
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 4.0e-24 115.5 79 77.2
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 5.2e-24 115.2 76 80.3
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 5.2e-24 115.2 65 84.6
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.2e-24 115.2 83 75.9
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 6.9e-24 114.8 97 68.0
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 6.9e-24 114.8 80 77.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 6.9e-24 114.8 79 78.5
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.2e-23 114.0 67 86.6
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.2e-23 114.0 77 77.9
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.5e-23 113.6 96 67.7
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.5e-23 113.6 63 87.3
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 2.0e-23 113.2 80 73.8
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.0e-23 113.2 82 75.6
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-23 112.8 96 60.4
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 2.6e-23 112.8 77 77.9
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 2.6e-23 112.8 76 75.0
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.4e-23 112.5 79 70.9
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 3.4e-23 112.5 79 70.9
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 3.4e-23 112.5 66 81.8
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 3.4e-23 112.5 64 89.1
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 4.4e-23 112.1 77 71.4
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 4.4e-23 112.1 77 71.4
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 4.4e-23 112.1 77 71.4
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 4.4e-23 112.1 77 71.4
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 4.4e-23 112.1 80 77.5
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 5.8e-23 111.7 77 70.1
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 7.6e-23 111.3 90 70.0
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 9.9e-23 110.9 99 60.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.7e-22 110.2 66 80.3
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 1.7e-22 110.2 79 68.4
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 4.9e-22 108.6 58 91.4
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 8.4e-22 107.8 80 70.0
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 8.4e-22 107.8 80 70.0
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-21 107.5 80 70.0
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 1.1e-21 107.5 80 70.0
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-21 107.5 80 70.0
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 1.1e-21 107.5 80 70.0
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 2.4e-21 106.3 63 79.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 4.2e-21 105.5 72 76.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 9.3e-21 104.4 78 66.7
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 9.3e-21 104.4 78 65.4
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 3.9e-19 99.0 72 72.2
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 1.5e-18 97.1 79 67.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 4.0e-16 89.0 50 84.0
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 9.9e-15 84.3 64 73.4
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 2.9e-14 82.8 80 56.2
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 9.3e-13 77.8 55 63.6
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 2.7e-12 76.3 74 54.1
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 4.6e-12 75.5 80 60.0
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 1.8e-11 73.6 77 57.1
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 8.7e-11 71.2 61 62.3
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.9e-10 70.1 57 61.4
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 3.3e-10 69.3 69 56.5
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-07 59.7 48 60.4
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-07 59.7 48 60.4
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-07 59.7 48 60.4
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 3.8e-06 55.8 31 87.1


User provided reference genes

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