Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 3.3e-144 515.0 252 100.0
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 4.0e-134 481.5 255 94.1
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 4.6e-130 468.0 255 91.0
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 2.3e-121 439.1 255 86.3
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 7.6e-101 370.9 239 74.5
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.9e-100 368.2 250 72.8
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 6.4e-100 367.9 244 74.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.9e-99 366.3 250 72.4
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 1.9e-99 366.3 247 74.5
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 4.2e-99 365.2 249 71.9
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 4.2e-99 365.2 247 74.5
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.6e-98 363.2 248 72.2
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.1e-98 362.8 250 72.0
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 8.7e-97 357.5 203 81.3
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 2.5e-96 355.9 247 73.7
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 4.3e-96 355.1 253 72.7
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 5.6e-96 354.8 254 68.1
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.8e-94 349.7 236 71.6
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.0e-94 348.6 248 69.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 5.3e-94 348.2 254 71.7
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.0e-94 347.4 248 68.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.2e-93 347.1 248 68.5
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.2e-93 347.1 248 68.5
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.2e-93 347.1 243 70.0
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 9.9e-93 344.0 242 70.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 9.9e-93 344.0 242 70.2
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.3e-92 343.6 248 68.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 2.2e-92 342.8 247 68.8
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 2.2e-92 342.8 247 68.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 2.2e-92 342.8 249 69.9
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.9e-92 342.4 247 71.3
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 6.4e-92 341.3 245 71.4
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 1.1e-91 340.5 251 70.5
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 1.4e-91 340.1 247 67.2
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 3.2e-91 339.0 204 77.5
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 4.2e-91 338.6 247 69.2
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 9.3e-91 337.4 247 68.8
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.2e-90 337.0 247 67.6
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.6e-90 336.7 253 65.6
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.7e-90 335.9 248 67.7
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.7e-90 335.9 220 72.7
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.6e-90 335.1 251 68.1
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 4.6e-90 335.1 233 71.2
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 7.9e-90 334.3 257 66.1
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 1.3e-89 333.6 242 67.8
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.3e-89 332.8 245 67.8
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 3.9e-89 332.0 248 65.3
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 5.1e-89 331.6 243 67.5
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.7e-89 331.3 247 67.6
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.1e-88 330.5 242 69.0
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.5e-88 329.3 249 67.5
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.3e-88 328.9 249 67.1
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 4.3e-88 328.6 255 67.1
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 5.6e-88 328.2 245 67.3
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.6e-87 326.6 244 68.0
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 1.6e-87 326.6 248 66.5
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.1e-87 326.2 243 66.7
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.8e-87 325.9 227 70.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 2.8e-87 325.9 207 73.4
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 3.7e-87 325.5 248 65.7
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.4e-86 323.6 235 68.1
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 2.4e-86 322.8 199 74.9
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 3.1e-86 322.4 237 66.2
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 3.1e-86 322.4 246 65.9
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 4.0e-86 322.0 245 66.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 4.0e-86 322.0 209 72.2
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 6.9e-86 321.2 229 67.7
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 6.9e-86 321.2 235 65.5
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 6.9e-86 321.2 235 65.5
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 6.9e-86 321.2 211 73.5
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 6.9e-86 321.2 248 65.7
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 3.4e-85 318.9 237 66.2
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.0e-84 317.4 230 67.4
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.7e-84 316.6 250 64.8
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 3.8e-84 315.5 243 65.4
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.1e-83 313.9 271 62.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.9e-83 313.2 246 64.6
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.9e-83 313.2 256 65.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 4.2e-83 312.0 248 63.7
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 9.3e-83 310.8 243 65.0
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.2e-82 310.5 253 64.8
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.6e-82 310.1 179 78.8
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 7.9e-82 307.8 233 64.8
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.0e-81 307.4 244 63.1
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.3e-81 307.0 183 76.5
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 5.7e-80 301.6 283 57.6
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 3.7e-79 298.9 213 68.1
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 4.8e-79 298.5 247 62.3
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 9.0e-78 294.3 235 62.1
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.2e-77 293.9 179 75.4
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.5e-77 293.5 180 76.1
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 5.9e-77 291.6 247 59.9
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.9e-75 286.6 175 74.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 3.2e-75 285.8 169 76.3
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 4.2e-75 285.4 175 76.6
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 4.3e-72 275.4 169 76.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 2.5e-67 259.6 248 56.0
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.4e-64 248.8 189 65.6
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 9.7e-64 247.7 218 58.3
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.9e-61 238.4 136 79.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 1.0e-60 237.7 242 54.5
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 6.7e-57 224.9 202 52.5
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 3.7e-55 219.2 261 47.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 6.3e-55 218.4 172 57.0
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 2.5e-35 153.3 167 47.3
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.3e-33 146.7 173 51.4
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.2e-26 124.4 64 87.5
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.1e-26 122.1 73 75.3
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 8.9e-25 118.2 60 88.3
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 7.5e-24 115.2 231 36.4
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 9.2e-22 108.2 170 40.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.1e-19 101.3 85 61.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.8e-10 70.1 62 46.8


User provided reference genes

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