Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 3.0e-185 651.7 336 100.0
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 1.3e-76 290.8 320 58.8
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 1.5e-40 171.0 314 41.1
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.7e-26 123.2 390 29.2
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.1e-25 121.7 393 29.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 1.4e-25 121.3 368 31.5
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 9.4e-22 108.6 363 28.9
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.6e-21 107.8 349 29.5
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 4.7e-21 106.3 338 30.8
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.1e-21 105.9 338 30.8
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.9e-20 103.2 342 30.4
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 2.6e-19 100.5 417 27.3
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 9.7e-19 98.6 402 28.6
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 9.7e-19 98.6 240 35.0
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 9.7e-19 98.6 240 35.0
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.7e-18 97.8 380 30.3
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 4.8e-18 96.3 364 28.8
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 6.3e-18 95.9 309 30.1
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 8.2e-18 95.5 285 34.4
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 3.1e-17 93.6 347 28.8
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 7.0e-17 92.4 381 27.8
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.5e-16 91.3 338 28.1
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 1.5e-16 91.3 345 31.0
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.5e-16 91.3 352 30.1
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 1.5e-16 91.3 236 31.8
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 2.6e-16 90.5 445 25.6
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.0e-15 88.6 343 27.7
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.7e-15 87.8 251 31.9
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 2.2e-15 87.4 302 28.5
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.2e-15 87.4 319 29.8
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.9e-15 87.0 345 27.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 3.8e-15 86.7 338 29.0
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 8.5e-15 85.5 316 29.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.1e-14 85.1 382 26.7
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 1.1e-14 85.1 268 31.7
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.5e-14 84.7 345 27.2
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.5e-14 84.7 355 27.3
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 7.2e-14 82.4 304 32.9
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 9.4e-14 82.0 348 28.2
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.4e-12 78.2 314 29.3
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 2.3e-12 77.4 319 30.1
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 3.0e-12 77.0 335 27.8
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.9e-12 76.6 336 28.0
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 3.9e-12 76.6 303 27.4
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.9e-12 76.6 500 24.4
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 5.2e-12 76.3 263 28.1
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 6.7e-12 75.9 376 25.3
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 1.5e-11 74.7 333 27.3
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 2.0e-11 74.3 367 26.2
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.6e-11 73.9 376 25.3
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 2.6e-11 73.9 316 26.3
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 4.4e-11 73.2 389 27.5
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.7e-11 72.8 298 27.5
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.3e-10 71.6 192 31.2
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 1.3e-10 71.6 132 31.1
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.7e-10 71.2 304 26.0
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.2e-10 70.9 173 32.9
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 6.3e-10 69.3 387 25.6
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 6.3e-10 69.3 354 25.7
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 1.4e-09 68.2 312 26.9
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.4e-09 68.2 246 28.0
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.8e-09 67.8 438 23.3
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.8e-09 67.8 377 25.2
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.4e-09 67.4 416 27.2
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 4.1e-09 66.6 335 27.5
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 7.0e-09 65.9 256 27.7
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 7.0e-09 65.9 172 31.4
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 7.0e-09 65.9 266 27.8
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 9.1e-09 65.5 209 30.1
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.2e-08 65.1 310 25.2
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.6e-08 64.7 234 28.2
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.6e-08 64.7 160 29.4
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 2.0e-08 64.3 324 25.0
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 3.5e-08 63.5 244 27.9
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 7.7e-08 62.4 335 25.1
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 7.7e-08 62.4 277 27.4
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 7.7e-08 62.4 242 29.3
CsaV3_1G029070 Cucumis sativus L. HOM05D003426 ORTHO05D003816 1.7e-07 61.2 90 45.6
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.7e-07 61.2 356 24.4
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.7e-07 61.2 343 25.4
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 2.2e-07 60.8 372 25.5
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.9e-07 60.5 340 23.8
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 3.8e-07 60.1 334 24.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.8e-07 60.1 327 25.4
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 5.0e-07 59.7 352 24.1
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 6.5e-07 59.3 281 27.4
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 6.5e-07 59.3 262 24.8
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 6.5e-07 59.3 184 28.3
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.1e-06 58.5 292 24.0
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 1.5e-06 58.2 356 25.3
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-06 58.2 292 24.3
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.9e-06 57.8 358 25.7
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 2.5e-06 57.4 116 38.8
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 2.5e-06 57.4 101 36.6
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 2.5e-06 57.4 142 28.2
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 3.2e-06 57.0 294 25.5
Actinidia14135 Actinidia chinensis HOM05D022929 ORTHO05D003816 3.2e-06 57.0 133 33.8
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.2e-06 56.6 200 27.5
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 4.2e-06 56.6 215 27.0
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 5.5e-06 56.2 113 33.6
Lj4g0020146 Lotus japonicus HOM05D000650 ORTHO05D007302 5.5e-06 56.2 182 28.6
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 5.5e-06 56.2 259 28.2
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 7.2e-06 55.8 120 32.5
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 9.4e-06 55.5 193 29.0
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 9.4e-06 55.5 197 28.4


User provided reference genes

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