Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 1.4e-165 586.3 305 100.0
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.3e-136 489.2 267 94.0
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 3.0e-112 409.1 268 82.5
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.3e-91 339.7 268 67.2
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.3e-91 339.7 271 67.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 3.9e-91 339.0 271 67.5
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.1e-91 338.6 271 67.5
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 1.1e-90 337.4 264 68.9
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 9.5e-90 334.3 276 67.0
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.6e-89 333.6 269 66.2
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.1e-89 333.2 276 65.9
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 2.8e-89 332.8 266 67.7
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 3.6e-89 332.4 311 61.4
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.6e-87 326.2 294 64.3
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 3.4e-87 325.9 281 67.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 4.4e-87 325.5 275 65.1
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.3e-86 323.9 268 67.2
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 4.9e-86 322.0 271 66.4
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 4.9e-86 322.0 215 74.9
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.4e-85 319.7 237 68.8
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 2.4e-85 319.7 287 63.1
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 3.2e-85 319.3 265 66.0
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 4.1e-85 318.9 275 65.1
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.7e-84 316.2 280 63.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 4.6e-84 315.5 267 62.9
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.3e-83 313.9 272 66.5
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.3e-83 313.9 260 63.8
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.7e-83 313.5 257 65.0
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.3e-83 313.2 280 64.6
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 3.0e-83 312.8 272 63.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 3.0e-83 312.8 266 62.8
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 3.9e-83 312.4 280 63.2
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 3.9e-83 312.4 274 61.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.9e-82 310.1 275 62.2
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 1.9e-82 310.1 274 64.2
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 4.3e-82 308.9 275 63.6
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.1e-81 306.6 278 61.9
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 3.6e-81 305.8 276 61.6
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 4.7e-81 305.4 275 62.2
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 8.1e-81 304.7 270 61.1
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.4e-80 303.9 275 61.8
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.4e-80 303.9 275 61.8
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.8e-80 303.5 277 61.0
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.4e-80 303.1 268 62.3
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 4.0e-80 302.4 264 63.6
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 8.9e-80 301.2 275 61.1
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.5e-79 300.4 233 67.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.5e-79 300.4 271 63.5
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 2.0e-79 300.1 269 63.9
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 3.4e-79 299.3 266 61.7
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.7e-78 297.0 269 59.1
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.8e-78 295.8 229 66.8
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 4.9e-78 295.4 272 62.1
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 4.9e-78 295.4 267 62.2
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 6.4e-78 295.0 274 60.6
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 8.4e-78 294.7 276 56.9
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.1e-77 294.3 277 58.8
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.4e-77 293.9 269 58.7
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 2.4e-77 293.1 285 55.4
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 5.4e-77 292.0 274 61.3
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 2.1e-76 290.0 282 61.3
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 2.7e-76 289.7 236 65.7
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.0e-75 287.7 241 65.6
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.3e-75 286.6 271 60.5
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.3e-75 286.6 281 57.3
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 3.9e-75 285.8 218 67.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 3.9e-75 285.8 282 58.5
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.9e-75 285.8 272 60.7
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.5e-74 283.9 243 66.7
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.5e-74 283.1 281 58.0
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 5.6e-74 282.0 241 67.2
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.6e-73 280.4 277 59.6
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.4e-72 276.6 291 58.8
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 5.3e-72 275.4 296 54.4
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.5e-71 273.9 223 64.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 4.5e-71 272.3 282 57.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 4.5e-71 272.3 275 58.9
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.9e-70 269.6 302 55.3
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.8e-70 269.2 192 69.3
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 3.2e-69 266.2 254 57.9
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 3.2e-69 266.2 288 58.0
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 7.1e-69 265.0 310 52.6
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 9.3e-69 264.6 273 58.2
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-68 264.2 248 63.3
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 6.2e-65 251.9 178 74.2
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.4e-64 250.8 277 57.4
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 3.1e-64 249.6 213 61.0
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 9.9e-63 244.6 280 51.1
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 2.9e-62 243.0 196 65.8
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 1.1e-61 241.1 244 56.1
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.4e-61 240.7 270 55.9
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 3.5e-60 236.1 189 67.7
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 7.9e-60 235.0 213 58.2
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 3.8e-54 216.1 164 68.3
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.8e-54 216.1 238 53.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.9e-48 195.3 188 59.0
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 9.0e-48 194.9 195 60.0
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 7.4e-42 175.3 224 44.6
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 9.7e-42 174.9 201 44.8
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 3.7e-41 172.9 162 64.8
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 1.1e-37 161.4 151 60.3
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 5.5e-37 159.1 114 71.9
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 7.9e-36 155.2 213 45.1
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 8.8e-35 151.8 201 42.3
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.7e-34 149.1 229 43.7
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.3e-30 137.9 112 62.5
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 5.0e-30 136.0 203 38.9
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 1.6e-28 131.0 101 69.3
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 8.2e-25 118.6 124 54.0
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.6e-23 113.6 109 61.5
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.0e-22 111.7 86 65.1
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.2e-22 110.5 108 58.3
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 5.5e-21 105.9 86 66.3
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.1e-20 104.0 86 66.3
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.4e-19 101.3 77 67.5
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 3.3e-18 96.7 89 53.9
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.0e-14 85.1 86 52.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 2.2e-09 67.4 46 69.6
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.5e-07 60.1 58 56.9
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.5e-07 59.7 61 55.7


User provided reference genes

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