Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 3.4e-95 351.7 180 100.0
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 3.7e-81 305.1 181 87.3
ClCG10G013990 Citrullus lanatus HOM05D008092 ORTHO05D010277 5.6e-21 105.1 77 74.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-19 99.4 181 39.8
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-19 99.4 181 39.8
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.3e-17 94.0 152 42.1
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.3e-17 94.0 184 37.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 4.9e-17 92.0 108 48.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 1.8e-16 90.1 151 39.7
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 5.4e-16 88.6 181 36.5
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 9.2e-16 87.8 183 33.9
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.6e-15 87.0 190 36.8
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 2.0e-15 86.7 105 44.8
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.0e-14 84.3 170 37.6
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 3.9e-14 82.4 185 34.1
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 6.6e-14 81.6 183 31.1
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 6.6e-14 81.6 187 33.7
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.1e-13 80.9 182 33.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.1e-13 80.9 182 33.5
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.1e-13 80.9 108 42.6
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.9e-13 80.1 187 32.6
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.9e-13 80.1 185 34.1
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 3.3e-13 79.3 105 39.0
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 5.6e-13 78.6 103 40.8
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 7.3e-13 78.2 185 33.0
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 7.3e-13 78.2 182 32.4
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.6e-12 77.0 180 32.8
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 4.7e-12 75.5 185 34.6
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.8e-11 73.6 103 40.8
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 2.3e-11 73.2 108 38.9
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 6.8e-11 71.6 181 35.9
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.4e-10 69.3 181 33.7
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.4e-10 69.3 107 40.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 3.4e-10 69.3 151 31.8
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.7e-09 65.9 106 40.6
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.7e-09 65.9 106 40.6
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 3.7e-09 65.9 109 36.7
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 3.7e-09 65.9 97 40.2
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.9e-09 65.5 57 54.4
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.1e-08 64.3 107 40.2
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 1.4e-08 63.9 108 35.2
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.9e-08 63.5 185 33.5
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 3.2e-08 62.8 168 31.0
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.1e-08 62.4 63 49.2
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.1e-08 62.4 108 39.8
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 9.2e-08 61.2 108 35.2
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 9.2e-08 61.2 184 29.3
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.2e-07 60.8 99 37.4
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.6e-07 60.5 106 35.8
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.7e-07 59.7 110 35.5
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.5e-07 59.3 108 34.3
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 7.8e-07 58.2 113 38.1


User provided reference genes

Program Settings